RNA–Protein interactions for RNA: ENST00000588806.1

ATP6V0A1-219, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 842 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-219ENST00000588806 SLC24A1O60721 1099 aa16.8■□□□□ 0.28
ATP6V0A1-219ENST00000588806 EIF3AQ14152 1382 aaKnown RBP16.79■□□□□ 0.28
ATP6V0A1-219ENST00000588806 PIP4K2BP78356 416 aa16.78■□□□□ 0.28
ATP6V0A1-219ENST00000588806 CARD11Q9BXL7 1154 aa16.78■□□□□ 0.28
ATP6V0A1-219ENST00000588806 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
ATP6V0A1-219ENST00000588806 RALGAPBQ86X10 1494 aa16.77■□□□□ 0.28
ATP6V0A1-219ENST00000588806 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
ATP6V0A1-219ENST00000588806 PLEKHH1Q9ULM0 1364 aa16.76■□□□□ 0.27
ATP6V0A1-219ENST00000588806 XIRP1Q702N8 1843 aaKnown RBP16.75■□□□□ 0.27
ATP6V0A1-219ENST00000588806 CENPJQ9HC77 1338 aaPredicted RBP16.75■□□□□ 0.27
ATP6V0A1-219ENST00000588806 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
ATP6V0A1-219ENST00000588806 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
ATP6V0A1-219ENST00000588806 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
ATP6V0A1-219ENST00000588806 MST1RQ04912 1400 aa16.72■□□□□ 0.27
ATP6V0A1-219ENST00000588806 WASLO00401 505 aaPredicted RBP16.72■□□□□ 0.27
ATP6V0A1-219ENST00000588806 SAFB2Q14151 953 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATP6V0A1-219ENST00000588806 C1orf167Q5SNV9 1468 aa16.7■□□□□ 0.26
ATP6V0A1-219ENST00000588806 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
ATP6V0A1-219ENST00000588806 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
ATP6V0A1-219ENST00000588806 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
ATP6V0A1-219ENST00000588806 ADGRB2O60241 1585 aa16.68■□□□□ 0.26
ATP6V0A1-219ENST00000588806 NALCNQ8IZF0 1738 aa16.68■□□□□ 0.26
ATP6V0A1-219ENST00000588806 SBNO2Q9Y2G9 1366 aa16.68■□□□□ 0.26
ATP6V0A1-219ENST00000588806 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
ATP6V0A1-219ENST00000588806 ESCO1Q5FWF5 840 aa16.67■□□□□ 0.26
ATP6V0A1-219ENST00000588806 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
ATP6V0A1-219ENST00000588806 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
ATP6V0A1-219ENST00000588806 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
ATP6V0A1-219ENST00000588806 HSPA1LP34931 641 aa16.65■□□□□ 0.26
ATP6V0A1-219ENST00000588806 PUS7Q96PZ0 661 aaKnown RBP16.65■□□□□ 0.26
ATP6V0A1-219ENST00000588806 NPHP3Q7Z494 1330 aa16.65■□□□□ 0.26
ATP6V0A1-219ENST00000588806 ORAI2Q96SN7 254 aa16.64■□□□□ 0.25
ATP6V0A1-219ENST00000588806 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
ATP6V0A1-219ENST00000588806 TULP4Q9NRJ4 1543 aa16.62■□□□□ 0.25
ATP6V0A1-219ENST00000588806 SRPK2P78362 688 aaKnown RBP16.62■□□□□ 0.25
ATP6V0A1-219ENST00000588806 LRRC59Q96AG4 307 aaKnown RBP16.62■□□□□ 0.25
ATP6V0A1-219ENST00000588806 NUDT16Q96DE0 195 aaKnown RBP16.62■□□□□ 0.25
ATP6V0A1-219ENST00000588806 PHF8Q9UPP1 1060 aa16.62■□□□□ 0.25
ATP6V0A1-219ENST00000588806 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
ATP6V0A1-219ENST00000588806 ST20-MTHFSA0A0A6YYL1 179 aa16.61■□□□□ 0.25
ATP6V0A1-219ENST00000588806 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
ATP6V0A1-219ENST00000588806 PSME1Q06323 249 aa16.61■□□□□ 0.25
ATP6V0A1-219ENST00000588806 USP47Q96K76 1375 aa16.61■□□□□ 0.25
ATP6V0A1-219ENST00000588806 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
ATP6V0A1-219ENST00000588806 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
ATP6V0A1-219ENST00000588806 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
ATP6V0A1-219ENST00000588806 FMN2Q9NZ56 1722 aa16.59■□□□□ 0.25
ATP6V0A1-219ENST00000588806 SOS2Q07890 1332 aaPredicted RBP16.59■□□□□ 0.25
ATP6V0A1-219ENST00000588806 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
ATP6V0A1-219ENST00000588806 FOXO3O43524 673 aa16.58■□□□□ 0.24
ATP6V0A1-219ENST00000588806 ATAD2Q6PL18 1390 aa16.58■□□□□ 0.24
ATP6V0A1-219ENST00000588806 JCADQ9P266 1359 aa16.57■□□□□ 0.24
ATP6V0A1-219ENST00000588806 PRR36Q9H6K5 1346 aa16.57■□□□□ 0.24
ATP6V0A1-219ENST00000588806 TMF1P82094 1093 aa16.57■□□□□ 0.24
ATP6V0A1-219ENST00000588806 TESK2Q96S53 571 aa16.57■□□□□ 0.24
ATP6V0A1-219ENST00000588806 ZEB1P37275 1124 aaPredicted RBP16.56■□□□□ 0.24
ATP6V0A1-219ENST00000588806 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
ATP6V0A1-219ENST00000588806 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
ATP6V0A1-219ENST00000588806 BRD4O60885 1362 aaPredicted RBP16.55■□□□□ 0.24
ATP6V0A1-219ENST00000588806 KRT28Q7Z3Y7 464 aa16.55■□□□□ 0.24
ATP6V0A1-219ENST00000588806 ZNF692Q9BU19 519 aaPredicted RBP16.55■□□□□ 0.24
ATP6V0A1-219ENST00000588806 KIF1AQ12756 1690 aa16.55■□□□□ 0.24
ATP6V0A1-219ENST00000588806 QRICH2Q9H0J4 1663 aa16.55■□□□□ 0.24
ATP6V0A1-219ENST00000588806 ATP7BP35670 1465 aa16.54■□□□□ 0.24
ATP6V0A1-219ENST00000588806 SPATA31A6Q5VVP1 1343 aa16.54■□□□□ 0.24
ATP6V0A1-219ENST00000588806 PMFBP1Q8TBY8 1022 aa16.53■□□□□ 0.24
ATP6V0A1-219ENST00000588806 SBNO1A3KN83 1393 aa16.52■□□□□ 0.24
ATP6V0A1-219ENST00000588806 POLR3AO14802 1390 aaPredicted RBP16.52■□□□□ 0.24
ATP6V0A1-219ENST00000588806 NINLQ9Y2I6 1382 aa16.52■□□□□ 0.24
ATP6V0A1-219ENST00000588806 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.23
ATP6V0A1-219ENST00000588806 PHLPP1O60346 1717 aa16.51■□□□□ 0.23
ATP6V0A1-219ENST00000588806 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
ATP6V0A1-219ENST00000588806 PPIP5K1Q6PFW1 1433 aa16.51■□□□□ 0.23
ATP6V0A1-219ENST00000588806 ACEP12821 1306 aa16.5■□□□□ 0.23
ATP6V0A1-219ENST00000588806 DDX17Q92841 729 aaKnown RBP16.5■□□□□ 0.23
ATP6V0A1-219ENST00000588806 SPATA31A3Q5VYP0 1347 aa16.49■□□□□ 0.23
ATP6V0A1-219ENST00000588806 COL16A1Q07092 1604 aaPredicted RBP16.49■□□□□ 0.23
ATP6V0A1-219ENST00000588806 USP32Q8NFA0 1604 aa16.49■□□□□ 0.23
ATP6V0A1-219ENST00000588806 ARHGEF10O15013 1369 aa16.49■□□□□ 0.23
ATP6V0A1-219ENST00000588806 PXDNQ92626 1479 aa16.48■□□□□ 0.23
ATP6V0A1-219ENST00000588806 HSPA5P11021 654 aaKnown RBP16.48■□□□□ 0.23
ATP6V0A1-219ENST00000588806 TERF2IPQ9NYB0 399 aa16.48■□□□□ 0.23
ATP6V0A1-219ENST00000588806 ITSN1Q15811 1721 aa16.48■□□□□ 0.23
ATP6V0A1-219ENST00000588806 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
ATP6V0A1-219ENST00000588806 PNPLA6Q8IY17 1366 aa16.46■□□□□ 0.23
ATP6V0A1-219ENST00000588806 XPCQ01831 940 aaPredicted RBP16.45■□□□□ 0.22
ATP6V0A1-219ENST00000588806 TMC1Q8TDI8 760 aa16.45■□□□□ 0.22
ATP6V0A1-219ENST00000588806 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
ATP6V0A1-219ENST00000588806 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
ATP6V0A1-219ENST00000588806 CPSF1Q10570 1443 aaKnown RBP16.43■□□□□ 0.22
ATP6V0A1-219ENST00000588806 TOPAZ1Q8N9V7 1692 aa16.43■□□□□ 0.22
ATP6V0A1-219ENST00000588806 DISP3Q9P2K9 1392 aa16.42■□□□□ 0.22
ATP6V0A1-219ENST00000588806 TTC21AQ8NDW8 1320 aa16.42■□□□□ 0.22
ATP6V0A1-219ENST00000588806 SHPRHQ149N8 1683 aa16.41■□□□□ 0.22
ATP6V0A1-219ENST00000588806 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
ATP6V0A1-219ENST00000588806 SLC12A5Q9H2X9 1139 aa16.41■□□□□ 0.22
ATP6V0A1-219ENST00000588806 USP6P35125 1406 aa16.41■□□□□ 0.22
ATP6V0A1-219ENST00000588806 KTN1Q86UP2 1357 aaKnown RBP16.4■□□□□ 0.22
ATP6V0A1-219ENST00000588806 NLRP13Q86W25 1043 aa16.4■□□□□ 0.22
ATP6V0A1-219ENST00000588806 ABTB2Q8N961 1025 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms