RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 CAMK2BQ13554 666 aa14.2□□□□□ -0.14
TUBD1-209ENST00000588706 ZNF777Q9ULD5 760 aaPredicted RBP14.2□□□□□ -0.14
TUBD1-209ENST00000588706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.2□□□□□ -0.14
TUBD1-209ENST00000588706 FAM135AQ9P2D6 1515 aa14.2□□□□□ -0.14
TUBD1-209ENST00000588706 MAGI2Q86UL8 1455 aa14.19□□□□□ -0.14
TUBD1-209ENST00000588706 ARSIQ5FYB1 569 aa14.19□□□□□ -0.14
TUBD1-209ENST00000588706 OXER1Q8TDS5 423 aa14.19□□□□□ -0.14
TUBD1-209ENST00000588706 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
TUBD1-209ENST00000588706 HOXB1P14653 301 aaPredicted RBP14.18□□□□□ -0.14
TUBD1-209ENST00000588706 GPR153Q6NV75 609 aa14.18□□□□□ -0.14
TUBD1-209ENST00000588706 EMILIN3Q9NT22 766 aa14.18□□□□□ -0.14
TUBD1-209ENST00000588706 KDM2AQ9Y2K7 1162 aa14.18□□□□□ -0.14
TUBD1-209ENST00000588706 USP47Q96K76 1375 aa14.18□□□□□ -0.14
TUBD1-209ENST00000588706 SYCP2Q9BX26 1530 aa14.16□□□□□ -0.14
TUBD1-209ENST00000588706 MAP3K9P80192 1104 aa14.16□□□□□ -0.14
TUBD1-209ENST00000588706 NBPF8Q3BBV2 869 aa14.16□□□□□ -0.14
TUBD1-209ENST00000588706 PRKRIP1Q9H875 184 aaPredicted RBP14.16□□□□□ -0.14
TUBD1-209ENST00000588706 WDR7Q9Y4E6 1490 aa14.16□□□□□ -0.14
TUBD1-209ENST00000588706 TTC37Q6PGP7 1564 aa14.16□□□□□ -0.14
TUBD1-209ENST00000588706 RTEL1-TNFRSF6BF6WH68 1400 aa14.15□□□□□ -0.14
TUBD1-209ENST00000588706 LCE2DQ5TA82 110 aaPredicted RBP14.15□□□□□ -0.14
TUBD1-209ENST00000588706 HIRIP3Q9BW71 556 aaPredicted RBP14.15□□□□□ -0.14
TUBD1-209ENST00000588706 ZCCHC11Q5TAX3 1644 aaKnown RBP14.15□□□□□ -0.14
TUBD1-209ENST00000588706 PLCH2O75038 1416 aa14.15□□□□□ -0.14
TUBD1-209ENST00000588706 KIF7Q2M1P5 1343 aa14.15□□□□□ -0.15
TUBD1-209ENST00000588706 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.15
TUBD1-209ENST00000588706 CCDC144AA2RUR9 1427 aa14.14□□□□□ -0.15
TUBD1-209ENST00000588706 NEURL4Q96JN8 1562 aa14.13□□□□□ -0.15
TUBD1-209ENST00000588706 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
TUBD1-209ENST00000588706 NUDT7P0C024 238 aa14.13□□□□□ -0.15
TUBD1-209ENST00000588706 ABCC1P33527 1531 aa14.13□□□□□ -0.15
TUBD1-209ENST00000588706 ZBED9Q6R2W3 1325 aa14.13□□□□□ -0.15
TUBD1-209ENST00000588706 EMP3P54852 163 aa14.12□□□□□ -0.15
TUBD1-209ENST00000588706 MARVELD3Q96A59 401 aa14.12□□□□□ -0.15
TUBD1-209ENST00000588706 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
TUBD1-209ENST00000588706 TRPM1Q7Z4N2 1603 aa14.12□□□□□ -0.15
TUBD1-209ENST00000588706 GPRASP1Q5JY77 1395 aa14.11□□□□□ -0.15
TUBD1-209ENST00000588706 DPYSL4O14531 572 aa14.11□□□□□ -0.15
TUBD1-209ENST00000588706 E9PCH4 1651 aa14.1□□□□□ -0.15
TUBD1-209ENST00000588706 EFCAB2Q5VUJ9 269 aa14.1□□□□□ -0.15
TUBD1-209ENST00000588706 WASHC2CQ9Y4E1 1318 aa14.1□□□□□ -0.15
TUBD1-209ENST00000588706 ZMYM4Q5VZL5 1548 aa14.1□□□□□ -0.15
TUBD1-209ENST00000588706 HNRNPUQ00839 825 aaKnown RBP eCLIP14.09□□□□□ -0.15
TUBD1-209ENST00000588706 KCNV2Q8TDN2 545 aa14.09□□□□□ -0.15
TUBD1-209ENST00000588706 INSRP06213 1382 aa14.09□□□□□ -0.15
TUBD1-209ENST00000588706 BCORL1Q5H9F3 1711 aa14.08□□□□□ -0.16
TUBD1-209ENST00000588706 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
TUBD1-209ENST00000588706 DEPDC5O75140 1603 aa14.06□□□□□ -0.16
TUBD1-209ENST00000588706 EVI5O60447 810 aa14.06□□□□□ -0.16
TUBD1-209ENST00000588706 HNRNPMP52272 730 aaKnown RBP eCLIP14.06□□□□□ -0.16
TUBD1-209ENST00000588706 RALBP1Q15311 655 aa14.06□□□□□ -0.16
TUBD1-209ENST00000588706 CARD11Q9BXL7 1154 aa14.06□□□□□ -0.16
TUBD1-209ENST00000588706 MRS2Q9HD23 443 aa14.06□□□□□ -0.16
TUBD1-209ENST00000588706 DHX29Q7Z478 1369 aaKnown RBP14.06□□□□□ -0.16
TUBD1-209ENST00000588706 ERBB3P21860 1342 aa14.05□□□□□ -0.16
TUBD1-209ENST00000588706 PRDM15P57071 1507 aaPredicted RBP14.05□□□□□ -0.16
TUBD1-209ENST00000588706 ARHGEF1Q92888 912 aaKnown RBP14.04□□□□□ -0.16
TUBD1-209ENST00000588706 ARIH1Q9Y4X5 557 aaPredicted RBP14.04□□□□□ -0.16
TUBD1-209ENST00000588706 BRD4O60885 1362 aaPredicted RBP14.04□□□□□ -0.16
TUBD1-209ENST00000588706 CFAP74Q9C0B2 1584 aa14.04□□□□□ -0.16
TUBD1-209ENST00000588706 ABCA9Q8IUA7 1624 aa14.04□□□□□ -0.16
TUBD1-209ENST00000588706 RNF17Q9BXT8 1623 aaKnown RBP14.04□□□□□ -0.16
TUBD1-209ENST00000588706 FAM205CA6NFA0 338 aa14.03□□□□□ -0.16
TUBD1-209ENST00000588706 TET3O43151 1660 aa14.03□□□□□ -0.16
TUBD1-209ENST00000588706 KIAA1210Q9ULL0 1709 aa14.03□□□□□ -0.16
TUBD1-209ENST00000588706 CEP152O94986 1710 aa14.02□□□□□ -0.16
TUBD1-209ENST00000588706 TRPM2O94759 1503 aa14.02□□□□□ -0.16
TUBD1-209ENST00000588706 POTEMA6NI47 508 aa14.01□□□□□ -0.17
TUBD1-209ENST00000588706 C11orf95C9JLR9 678 aaPredicted RBP14.01□□□□□ -0.17
TUBD1-209ENST00000588706 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
TUBD1-209ENST00000588706 LHX6Q9UPM6 363 aa14.01□□□□□ -0.17
TUBD1-209ENST00000588706 ZFYVE16Q7Z3T8 1539 aa14□□□□□ -0.17
TUBD1-209ENST00000588706 SMG6Q86US8 1419 aaKnown RBP14□□□□□ -0.17
TUBD1-209ENST00000588706 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
TUBD1-209ENST00000588706 SPDYE16A6NNV3 312 aaPredicted RBP14□□□□□ -0.17
TUBD1-209ENST00000588706 PDIA6Q15084 440 aa14□□□□□ -0.17
TUBD1-209ENST00000588706 SPHKAPQ2M3C7 1700 aa14□□□□□ -0.17
TUBD1-209ENST00000588706 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
TUBD1-209ENST00000588706 KANK1Q14678 1352 aa13.99□□□□□ -0.17
TUBD1-209ENST00000588706 A2MP01023 1474 aa13.99□□□□□ -0.17
TUBD1-209ENST00000588706 COL17A1Q9UMD9 1497 aaPredicted RBP13.99□□□□□ -0.17
TUBD1-209ENST00000588706 MYBBP1AQ9BQG0 1328 aaKnown RBP13.98□□□□□ -0.17
TUBD1-209ENST00000588706 ERCC6L2Q5T890 1561 aa13.98□□□□□ -0.17
TUBD1-209ENST00000588706 VARS2Q5ST30 1063 aaKnown RBP13.98□□□□□ -0.17
TUBD1-209ENST00000588706 DCAF11Q8TEB1 546 aa13.98□□□□□ -0.17
TUBD1-209ENST00000588706 VWDEQ8N2E2 1590 aa13.97□□□□□ -0.17
TUBD1-209ENST00000588706 PSDA5PKW4 1024 aaPredicted RBP13.97□□□□□ -0.17
TUBD1-209ENST00000588706 CDCA8Q53HL2 280 aa13.97□□□□□ -0.17
TUBD1-209ENST00000588706 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
TUBD1-209ENST00000588706 ANO8Q9HCE9 1232 aaPredicted RBP13.97□□□□□ -0.17
TUBD1-209ENST00000588706 PLA2R1Q13018 1463 aa13.97□□□□□ -0.17
TUBD1-209ENST00000588706 PTPRTO14522 1441 aa13.97□□□□□ -0.17
TUBD1-209ENST00000588706 ATP7AQ04656 1500 aa13.96□□□□□ -0.17
TUBD1-209ENST00000588706 PPP4R2Q9NY27 417 aa13.96□□□□□ -0.17
TUBD1-209ENST00000588706 SCAPERQ9BY12 1400 aa13.96□□□□□ -0.18
TUBD1-209ENST00000588706 SPAG9O60271 1321 aaKnown RBP13.95□□□□□ -0.18
TUBD1-209ENST00000588706 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
TUBD1-209ENST00000588706 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
TUBD1-209ENST00000588706 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
TUBD1-209ENST00000588706 LRPPRCP42704 1394 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms