RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 MYO5BQ9ULV0 1848 aa11.56□□□□□ -0.56
GPATCH8-206ENST00000588554 KDM5AP29375 1690 aaKnown RBP11.55□□□□□ -0.56
GPATCH8-206ENST00000588554 NUP155O75694 1391 aa11.55□□□□□ -0.56
GPATCH8-206ENST00000588554 ZFYVE9O95405 1425 aa11.55□□□□□ -0.56
GPATCH8-206ENST00000588554 RIMS2Q9UQ26 1411 aa11.55□□□□□ -0.56
GPATCH8-206ENST00000588554 TIE1P35590 1138 aa11.55□□□□□ -0.56
GPATCH8-206ENST00000588554 UNC13BO14795 1591 aa11.54□□□□□ -0.56
GPATCH8-206ENST00000588554 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
GPATCH8-206ENST00000588554 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
GPATCH8-206ENST00000588554 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
GPATCH8-206ENST00000588554 RPRD2Q5VT52 1461 aaKnown RBP11.54□□□□□ -0.56
GPATCH8-206ENST00000588554 E9PCH4 1651 aa11.54□□□□□ -0.56
GPATCH8-206ENST00000588554 GCC2Q8IWJ2 1684 aa11.54□□□□□ -0.56
GPATCH8-206ENST00000588554 ROCK1Q13464 1354 aa11.54□□□□□ -0.56
GPATCH8-206ENST00000588554 TMEM131LA2VDJ0 1609 aa11.53□□□□□ -0.56
GPATCH8-206ENST00000588554 RGS17Q9UGC6 210 aaPredicted RBP11.53□□□□□ -0.56
GPATCH8-206ENST00000588554 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
GPATCH8-206ENST00000588554 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
GPATCH8-206ENST00000588554 PLEKHG1Q9ULL1 1385 aa11.52□□□□□ -0.57
GPATCH8-206ENST00000588554 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
GPATCH8-206ENST00000588554 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
GPATCH8-206ENST00000588554 TBX22Q9Y458 520 aa11.51□□□□□ -0.57
GPATCH8-206ENST00000588554 FAM135BQ49AJ0 1406 aa11.51□□□□□ -0.57
GPATCH8-206ENST00000588554 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
GPATCH8-206ENST00000588554 SLC39A7Q92504 469 aa11.5□□□□□ -0.57
GPATCH8-206ENST00000588554 ADAMTS13Q76LX8 1427 aa11.5□□□□□ -0.57
GPATCH8-206ENST00000588554 IQGAP3Q86VI3 1631 aa11.49□□□□□ -0.57
GPATCH8-206ENST00000588554 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
GPATCH8-206ENST00000588554 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.49□□□□□ -0.57
GPATCH8-206ENST00000588554 NWD1Q149M9 1564 aa11.49□□□□□ -0.57
GPATCH8-206ENST00000588554 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
GPATCH8-206ENST00000588554 C7P10643 843 aa11.48□□□□□ -0.57
GPATCH8-206ENST00000588554 MSH6P52701 1360 aa11.48□□□□□ -0.57
GPATCH8-206ENST00000588554 CHD2O14647 1828 aaKnown RBP11.48□□□□□ -0.57
GPATCH8-206ENST00000588554 NKTRP30414 1462 aaKnown RBP11.47□□□□□ -0.57
GPATCH8-206ENST00000588554 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
GPATCH8-206ENST00000588554 C14orf37Q86TY3 774 aa11.47□□□□□ -0.57
GPATCH8-206ENST00000588554 AMOTL2Q9Y2J4 779 aa11.47□□□□□ -0.57
GPATCH8-206ENST00000588554 PTPRUQ92729 1446 aa11.46□□□□□ -0.57
GPATCH8-206ENST00000588554 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
GPATCH8-206ENST00000588554 ZNF467Q7Z7K2 595 aaPredicted RBP11.46□□□□□ -0.57
GPATCH8-206ENST00000588554 METRNQ9UJH8 293 aa11.46□□□□□ -0.57
GPATCH8-206ENST00000588554 POTEAQ6S8J7 498 aa11.45□□□□□ -0.58
GPATCH8-206ENST00000588554 PCDHB8Q9UN66 801 aa11.45□□□□□ -0.58
GPATCH8-206ENST00000588554 TMEM106CQ9BVX2 250 aa11.44□□□□□ -0.58
GPATCH8-206ENST00000588554 TRIM52Q96A61 297 aa11.43□□□□□ -0.58
GPATCH8-206ENST00000588554 C19orf44Q9H6X5 657 aa11.43□□□□□ -0.58
GPATCH8-206ENST00000588554 NAIPQ13075 1403 aa11.43□□□□□ -0.58
GPATCH8-206ENST00000588554 METP08581 1390 aa11.42□□□□□ -0.58
GPATCH8-206ENST00000588554 RRBP1Q9P2E9 1410 aaKnown RBP11.42□□□□□ -0.58
GPATCH8-206ENST00000588554 ATF3P18847 181 aa11.41□□□□□ -0.58
GPATCH8-206ENST00000588554 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
GPATCH8-206ENST00000588554 NRXN3Q9Y4C0 1643 aa11.41□□□□□ -0.58
GPATCH8-206ENST00000588554 PHLPP1O60346 1717 aa11.4□□□□□ -0.58
GPATCH8-206ENST00000588554 SPHKAPQ2M3C7 1700 aa11.4□□□□□ -0.58
GPATCH8-206ENST00000588554 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
GPATCH8-206ENST00000588554 CLTCL1P53675 1640 aa11.4□□□□□ -0.58
GPATCH8-206ENST00000588554 PIK3R4Q99570 1358 aa11.4□□□□□ -0.59
GPATCH8-206ENST00000588554 BRINP3Q76B58 766 aa11.39□□□□□ -0.59
GPATCH8-206ENST00000588554 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
GPATCH8-206ENST00000588554 DDX17Q92841 729 aaKnown RBP11.39□□□□□ -0.59
GPATCH8-206ENST00000588554 TRPM2O94759 1503 aa11.39□□□□□ -0.59
GPATCH8-206ENST00000588554 NCOA3Q9Y6Q9 1424 aa11.38□□□□□ -0.59
GPATCH8-206ENST00000588554 OTUD5Q96G74 571 aa11.38□□□□□ -0.59
GPATCH8-206ENST00000588554 JCADQ9P266 1359 aa11.38□□□□□ -0.59
GPATCH8-206ENST00000588554 DIP2AQ14689 1571 aa11.37□□□□□ -0.59
GPATCH8-206ENST00000588554 COL16A1Q07092 1604 aaPredicted RBP11.37□□□□□ -0.59
GPATCH8-206ENST00000588554 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
GPATCH8-206ENST00000588554 LRP6O75581 1613 aa11.36□□□□□ -0.59
GPATCH8-206ENST00000588554 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
GPATCH8-206ENST00000588554 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
GPATCH8-206ENST00000588554 IER5LQ5T953 404 aa11.36□□□□□ -0.59
GPATCH8-206ENST00000588554 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
GPATCH8-206ENST00000588554 SETBP1Q9Y6X0 1596 aa11.36□□□□□ -0.59
GPATCH8-206ENST00000588554 SEC24BO95487 1268 aa11.35□□□□□ -0.59
GPATCH8-206ENST00000588554 XRN1Q8IZH2 1706 aaKnown RBP11.35□□□□□ -0.59
GPATCH8-206ENST00000588554 HFM1A2PYH4 1435 aa11.35□□□□□ -0.59
GPATCH8-206ENST00000588554 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
GPATCH8-206ENST00000588554 PSEN1P49768 467 aa11.33□□□□□ -0.6
GPATCH8-206ENST00000588554 MEX3CQ5U5Q3 659 aaKnown RBP11.33□□□□□ -0.6
GPATCH8-206ENST00000588554 MST1RQ04912 1400 aa11.33□□□□□ -0.6
GPATCH8-206ENST00000588554 ROBO2Q9HCK4 1378 aa11.32□□□□□ -0.6
GPATCH8-206ENST00000588554 VGFO15240 615 aaPredicted RBP11.32□□□□□ -0.6
GPATCH8-206ENST00000588554 PDAP1Q13442 181 aaKnown RBP11.32□□□□□ -0.6
GPATCH8-206ENST00000588554 RGL3Q3MIN7 710 aa11.32□□□□□ -0.6
GPATCH8-206ENST00000588554 ORAI2Q96SN7 254 aa11.32□□□□□ -0.6
GPATCH8-206ENST00000588554 SPATA31A6Q5VVP1 1343 aa11.32□□□□□ -0.6
GPATCH8-206ENST00000588554 AHDC1Q5TGY3 1603 aaPredicted RBP11.31□□□□□ -0.6
GPATCH8-206ENST00000588554 KIF1BO60333 1816 aa11.31□□□□□ -0.6
GPATCH8-206ENST00000588554 ASXL1Q8IXJ9 1541 aa11.3□□□□□ -0.6
GPATCH8-206ENST00000588554 GOLGA2Q08379 1002 aa11.3□□□□□ -0.6
GPATCH8-206ENST00000588554 MPHOSPH9Q99550 1183 aa11.3□□□□□ -0.6
GPATCH8-206ENST00000588554 ADGRF5Q8IZF2 1346 aa11.3□□□□□ -0.6
GPATCH8-206ENST00000588554 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
GPATCH8-206ENST00000588554 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
GPATCH8-206ENST00000588554 ADGRL3Q9HAR2 1447 aa11.29□□□□□ -0.6
GPATCH8-206ENST00000588554 POTEMA6NI47 508 aa11.29□□□□□ -0.6
GPATCH8-206ENST00000588554 DCCP43146 1447 aa11.28□□□□□ -0.6
GPATCH8-206ENST00000588554 POTEFA5A3E0 1075 aa11.28□□□□□ -0.6
GPATCH8-206ENST00000588554 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms