RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 ORAI2Q96SN7 254 aa12.86□□□□□ -0.35
SDF2-207ENST00000588472 YTHDC2Q9H6S0 1430 aaKnown RBP12.86□□□□□ -0.35
SDF2-207ENST00000588472 MYOM2P54296 1465 aa12.85□□□□□ -0.35
SDF2-207ENST00000588472 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
SDF2-207ENST00000588472 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
SDF2-207ENST00000588472 ABCC11Q96J66 1382 aa12.84□□□□□ -0.35
SDF2-207ENST00000588472 NUTM2BA6NNL0 878 aaPredicted RBP12.84□□□□□ -0.35
SDF2-207ENST00000588472 NUTM2EB1AL46 878 aaPredicted RBP12.84□□□□□ -0.35
SDF2-207ENST00000588472 ESCO1Q5FWF5 840 aa12.84□□□□□ -0.35
SDF2-207ENST00000588472 NUTM2AQ8IVF1 878 aaPredicted RBP12.84□□□□□ -0.35
SDF2-207ENST00000588472 PRAM1Q96QH2 718 aa12.84□□□□□ -0.35
SDF2-207ENST00000588472 POGKQ9P215 609 aa12.84□□□□□ -0.35
SDF2-207ENST00000588472 TRAK1Q9UPV9 953 aa12.84□□□□□ -0.35
SDF2-207ENST00000588472 C1orf167Q5SNV9 1468 aa12.84□□□□□ -0.35
SDF2-207ENST00000588472 TRIM26Q12899 539 aaPredicted RBP12.83□□□□□ -0.36
SDF2-207ENST00000588472 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
SDF2-207ENST00000588472 AHDC1Q5TGY3 1603 aaPredicted RBP12.83□□□□□ -0.36
SDF2-207ENST00000588472 CDK12Q9NYV4 1490 aaPredicted RBP12.83□□□□□ -0.36
SDF2-207ENST00000588472 NRXN1Q9ULB1 1477 aa12.83□□□□□ -0.36
SDF2-207ENST00000588472 PRAG1Q86YV5 1406 aa12.81□□□□□ -0.36
SDF2-207ENST00000588472 AFF2P51816 1311 aa12.81□□□□□ -0.36
SDF2-207ENST00000588472 TECPR2O15040 1411 aa12.8□□□□□ -0.36
SDF2-207ENST00000588472 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
SDF2-207ENST00000588472 XPCQ01831 940 aaPredicted RBP12.8□□□□□ -0.36
SDF2-207ENST00000588472 LRRC59Q96AG4 307 aaKnown RBP12.8□□□□□ -0.36
SDF2-207ENST00000588472 HIRIP3Q9BW71 556 aaPredicted RBP12.8□□□□□ -0.36
SDF2-207ENST00000588472 LAMC1P11047 1609 aa12.8□□□□□ -0.36
SDF2-207ENST00000588472 SIRT1Q96EB6 747 aa12.79□□□□□ -0.36
SDF2-207ENST00000588472 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
SDF2-207ENST00000588472 KNDC1Q76NI1 1749 aa12.79□□□□□ -0.36
SDF2-207ENST00000588472 FOXO3O43524 673 aa12.78□□□□□ -0.36
SDF2-207ENST00000588472 MINK1Q8N4C8 1332 aaPredicted RBP12.78□□□□□ -0.36
SDF2-207ENST00000588472 RBM6P78332 1123 aaKnown RBP12.77□□□□□ -0.37
SDF2-207ENST00000588472 L3MBTL2Q969R5 705 aa12.77□□□□□ -0.37
SDF2-207ENST00000588472 C8orf37Q96NL8 207 aa12.77□□□□□ -0.37
SDF2-207ENST00000588472 QTRT2Q9H974 415 aaKnown RBP12.77□□□□□ -0.37
SDF2-207ENST00000588472 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.37
SDF2-207ENST00000588472 NHSL1Q5SYE7 1610 aa12.77□□□□□ -0.37
SDF2-207ENST00000588472 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
SDF2-207ENST00000588472 ADGRB1O14514 1584 aa12.75□□□□□ -0.37
SDF2-207ENST00000588472 PLEKHG5O94827 1062 aa12.75□□□□□ -0.37
SDF2-207ENST00000588472 RGS12O14924 1447 aa12.74□□□□□ -0.37
SDF2-207ENST00000588472 NPHP3Q7Z494 1330 aa12.74□□□□□ -0.37
SDF2-207ENST00000588472 ADAMTS2O95450 1211 aa12.74□□□□□ -0.37
SDF2-207ENST00000588472 SOS2Q07890 1332 aaPredicted RBP12.73□□□□□ -0.37
SDF2-207ENST00000588472 PMFBP1Q8TBY8 1022 aa12.73□□□□□ -0.37
SDF2-207ENST00000588472 NGLY1Q96IV0 654 aa12.73□□□□□ -0.37
SDF2-207ENST00000588472 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
SDF2-207ENST00000588472 DLC1Q96QB1 1528 aa12.72□□□□□ -0.37
SDF2-207ENST00000588472 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
SDF2-207ENST00000588472 FMN2Q9NZ56 1722 aa12.72□□□□□ -0.37
SDF2-207ENST00000588472 KRT28Q7Z3Y7 464 aa12.72□□□□□ -0.37
SDF2-207ENST00000588472 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.37
SDF2-207ENST00000588472 PSME1Q06323 249 aa12.71□□□□□ -0.37
SDF2-207ENST00000588472 LMOD2Q6P5Q4 547 aa12.71□□□□□ -0.37
SDF2-207ENST00000588472 RGPD8O14715 1765 aaPredicted RBP12.71□□□□□ -0.38
SDF2-207ENST00000588472 WASLO00401 505 aaPredicted RBP12.7□□□□□ -0.38
SDF2-207ENST00000588472 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
SDF2-207ENST00000588472 PXDNQ92626 1479 aa12.68□□□□□ -0.38
SDF2-207ENST00000588472 CDK19Q9BWU1 502 aa12.68□□□□□ -0.38
SDF2-207ENST00000588472 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
SDF2-207ENST00000588472 PCGF6Q9BYE7 350 aa12.67□□□□□ -0.38
SDF2-207ENST00000588472 USP21Q9UK80 565 aa12.67□□□□□ -0.38
SDF2-207ENST00000588472 ARHGEF28Q8N1W1 1705 aaKnown RBP12.67□□□□□ -0.38
SDF2-207ENST00000588472 PRR36Q9H6K5 1346 aa12.66□□□□□ -0.38
SDF2-207ENST00000588472 KIAA1210Q9ULL0 1709 aa12.66□□□□□ -0.38
SDF2-207ENST00000588472 NGDNQ8NEJ9 315 aaKnown RBP12.66□□□□□ -0.38
SDF2-207ENST00000588472 NUDT16Q96DE0 195 aaKnown RBP12.66□□□□□ -0.38
SDF2-207ENST00000588472 TRPC5Q9UL62 973 aaPredicted RBP12.66□□□□□ -0.38
SDF2-207ENST00000588472 TONSLQ96HA7 1378 aa12.66□□□□□ -0.38
SDF2-207ENST00000588472 SPATA31A3Q5VYP0 1347 aa12.65□□□□□ -0.38
SDF2-207ENST00000588472 KIF1AQ12756 1690 aa12.65□□□□□ -0.38
SDF2-207ENST00000588472 PAK3O75914 559 aaPredicted RBP12.65□□□□□ -0.38
SDF2-207ENST00000588472 NBPF8Q3BBV2 869 aa12.65□□□□□ -0.38
SDF2-207ENST00000588472 CABLES1Q8TDN4 633 aa12.65□□□□□ -0.38
SDF2-207ENST00000588472 ROCK2O75116 1388 aaKnown RBP12.65□□□□□ -0.38
SDF2-207ENST00000588472 EIF3AQ14152 1382 aaKnown RBP12.65□□□□□ -0.38
SDF2-207ENST00000588472 USP32Q8NFA0 1604 aa12.65□□□□□ -0.38
SDF2-207ENST00000588472 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
SDF2-207ENST00000588472 CENPJQ9HC77 1338 aaPredicted RBP12.64□□□□□ -0.39
SDF2-207ENST00000588472 ANKARQ7Z5J8 1434 aa12.64□□□□□ -0.39
SDF2-207ENST00000588472 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
SDF2-207ENST00000588472 TULP4Q9NRJ4 1543 aa12.63□□□□□ -0.39
SDF2-207ENST00000588472 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
SDF2-207ENST00000588472 SRCAPQ6ZRS2 3230 aa12.63□□□□□ -0.39
SDF2-207ENST00000588472 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
SDF2-207ENST00000588472 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
SDF2-207ENST00000588472 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
SDF2-207ENST00000588472 TRPM1Q7Z4N2 1603 aa12.61□□□□□ -0.39
SDF2-207ENST00000588472 TNS3Q68CZ2 1445 aa12.61□□□□□ -0.39
SDF2-207ENST00000588472 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
SDF2-207ENST00000588472 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
SDF2-207ENST00000588472 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
SDF2-207ENST00000588472 ATRNO75882 1429 aa12.6□□□□□ -0.39
SDF2-207ENST00000588472 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
SDF2-207ENST00000588472 NUTM2GQ5VZR2 741 aa12.59□□□□□ -0.39
SDF2-207ENST00000588472 ACEP12821 1306 aa12.59□□□□□ -0.39
SDF2-207ENST00000588472 ATP7BP35670 1465 aa12.59□□□□□ -0.39
SDF2-207ENST00000588472 QRICH2Q9H0J4 1663 aa12.58□□□□□ -0.4
SDF2-207ENST00000588472 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms