RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 ARHGEF28Q8N1W1 1705 aaKnown RBP14.51□□□□□ -0.09
CNN1-207ENST00000588468 TMEM132EQ6IEE7 984 aa14.5□□□□□ -0.09
CNN1-207ENST00000588468 STK26Q9P289 416 aa14.5□□□□□ -0.09
CNN1-207ENST00000588468 CFAP70Q5T0N1 1121 aa14.49□□□□□ -0.09
CNN1-207ENST00000588468 DCAF11Q8TEB1 546 aa14.49□□□□□ -0.09
CNN1-207ENST00000588468 PHF23Q9BUL5 403 aaPredicted RBP14.49□□□□□ -0.09
CNN1-207ENST00000588468 PLEKHH1Q9ULM0 1364 aa14.48□□□□□ -0.09
CNN1-207ENST00000588468 SPATA31A6Q5VVP1 1343 aa14.47□□□□□ -0.09
CNN1-207ENST00000588468 RGPD8O14715 1765 aaPredicted RBP14.46□□□□□ -0.09
CNN1-207ENST00000588468 COL22A1Q8NFW1 1626 aaPredicted RBP14.45□□□□□ -0.1
CNN1-207ENST00000588468 ILDR2Q71H61 639 aa14.45□□□□□ -0.1
CNN1-207ENST00000588468 WAPLQ7Z5K2 1190 aa14.45□□□□□ -0.1
CNN1-207ENST00000588468 LRP6O75581 1613 aa14.44□□□□□ -0.1
CNN1-207ENST00000588468 KDM2AQ9Y2K7 1162 aa14.44□□□□□ -0.1
CNN1-207ENST00000588468 ITSN1Q15811 1721 aa14.44□□□□□ -0.1
CNN1-207ENST00000588468 ANKARQ7Z5J8 1434 aa14.43□□□□□ -0.1
CNN1-207ENST00000588468 TRIM26Q12899 539 aaPredicted RBP14.43□□□□□ -0.1
CNN1-207ENST00000588468 USP32Q8NFA0 1604 aa14.43□□□□□ -0.1
CNN1-207ENST00000588468 EIF3AQ14152 1382 aaKnown RBP14.43□□□□□ -0.1
CNN1-207ENST00000588468 PXDNQ92626 1479 aa14.43□□□□□ -0.1
CNN1-207ENST00000588468 SOS2Q07890 1332 aaPredicted RBP14.42□□□□□ -0.1
CNN1-207ENST00000588468 TRPM1Q7Z4N2 1603 aa14.42□□□□□ -0.1
CNN1-207ENST00000588468 LRRC59Q96AG4 307 aaKnown RBP14.42□□□□□ -0.1
CNN1-207ENST00000588468 PRAM1Q96QH2 718 aa14.42□□□□□ -0.1
CNN1-207ENST00000588468 PNPLA6Q8IY17 1366 aa14.42□□□□□ -0.1
CNN1-207ENST00000588468 NPHP3Q7Z494 1330 aa14.41□□□□□ -0.1
CNN1-207ENST00000588468 ORAI2Q96SN7 254 aa14.41□□□□□ -0.1
CNN1-207ENST00000588468 TULP4Q9NRJ4 1543 aa14.41□□□□□ -0.1
CNN1-207ENST00000588468 POGKQ9P215 609 aa14.4□□□□□ -0.1
CNN1-207ENST00000588468 MARF1Q9Y4F3 1742 aaKnown RBP14.39□□□□□ -0.11
CNN1-207ENST00000588468 ESCO1Q5FWF5 840 aa14.38□□□□□ -0.11
CNN1-207ENST00000588468 DDX17Q92841 729 aaKnown RBP14.38□□□□□ -0.11
CNN1-207ENST00000588468 TRAK1Q9UPV9 953 aa14.38□□□□□ -0.11
CNN1-207ENST00000588468 TOPAZ1Q8N9V7 1692 aa14.37□□□□□ -0.11
CNN1-207ENST00000588468 QRICH2Q9H0J4 1663 aa14.37□□□□□ -0.11
CNN1-207ENST00000588468 SOCS7O14512 581 aa14.37□□□□□ -0.11
CNN1-207ENST00000588468 SAFB2Q14151 953 aaKnown RBP eCLIP14.36□□□□□ -0.11
CNN1-207ENST00000588468 MEX3CQ5U5Q3 659 aaKnown RBP14.36□□□□□ -0.11
CNN1-207ENST00000588468 RGS17Q9UGC6 210 aaPredicted RBP14.36□□□□□ -0.11
CNN1-207ENST00000588468 ABCA3Q99758 1704 aa14.35□□□□□ -0.11
CNN1-207ENST00000588468 TRPM3Q9HCF6 1732 aaPredicted RBP14.35□□□□□ -0.11
CNN1-207ENST00000588468 ATP7BP35670 1465 aa14.34□□□□□ -0.11
CNN1-207ENST00000588468 NUTM2FA1L443 756 aa14.34□□□□□ -0.11
CNN1-207ENST00000588468 L3MBTL2Q969R5 705 aa14.34□□□□□ -0.11
CNN1-207ENST00000588468 SIN3AQ96ST3 1273 aa14.33□□□□□ -0.12
CNN1-207ENST00000588468 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
CNN1-207ENST00000588468 MINK1Q8N4C8 1332 aaPredicted RBP14.33□□□□□ -0.12
CNN1-207ENST00000588468 TNS3Q68CZ2 1445 aa14.32□□□□□ -0.12
CNN1-207ENST00000588468 FOXO3O43524 673 aa14.32□□□□□ -0.12
CNN1-207ENST00000588468 ALS2Q96Q42 1657 aa14.32□□□□□ -0.12
CNN1-207ENST00000588468 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
CNN1-207ENST00000588468 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
CNN1-207ENST00000588468 WASLO00401 505 aaPredicted RBP14.31□□□□□ -0.12
CNN1-207ENST00000588468 ZNF772Q68DY9 489 aaPredicted RBP14.31□□□□□ -0.12
CNN1-207ENST00000588468 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
CNN1-207ENST00000588468 SBNO1A3KN83 1393 aa14.31□□□□□ -0.12
CNN1-207ENST00000588468 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.3□□□□□ -0.12
CNN1-207ENST00000588468 HIRIP3Q9BW71 556 aaPredicted RBP14.3□□□□□ -0.12
CNN1-207ENST00000588468 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
CNN1-207ENST00000588468 NBPF1Q3BBV0 1214 aa14.29□□□□□ -0.12
CNN1-207ENST00000588468 POTEAQ6S8J7 498 aa14.29□□□□□ -0.12
CNN1-207ENST00000588468 SPATA31A3Q5VYP0 1347 aa14.29□□□□□ -0.12
CNN1-207ENST00000588468 PRR36Q9H6K5 1346 aa14.29□□□□□ -0.12
CNN1-207ENST00000588468 ARHGEF10O15013 1369 aa14.29□□□□□ -0.12
CNN1-207ENST00000588468 GPRASP1Q5JY77 1395 aa14.29□□□□□ -0.12
CNN1-207ENST00000588468 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
CNN1-207ENST00000588468 RALGAPBQ86X10 1494 aa14.29□□□□□ -0.12
CNN1-207ENST00000588468 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
CNN1-207ENST00000588468 XPCQ01831 940 aaPredicted RBP14.28□□□□□ -0.12
CNN1-207ENST00000588468 PSME1Q06323 249 aa14.28□□□□□ -0.12
CNN1-207ENST00000588468 CENPJQ9HC77 1338 aaPredicted RBP14.28□□□□□ -0.12
CNN1-207ENST00000588468 CDK12Q9NYV4 1490 aaPredicted RBP14.28□□□□□ -0.12
CNN1-207ENST00000588468 CRYBG1Q9Y4K1 1723 aa14.27□□□□□ -0.12
CNN1-207ENST00000588468 AFF2P51816 1311 aa14.27□□□□□ -0.12
CNN1-207ENST00000588468 KRT28Q7Z3Y7 464 aa14.27□□□□□ -0.13
CNN1-207ENST00000588468 NWD2Q9ULI1 1742 aa14.26□□□□□ -0.13
CNN1-207ENST00000588468 C8orf37Q96NL8 207 aa14.25□□□□□ -0.13
CNN1-207ENST00000588468 PLCH1Q4KWH8 1693 aa14.25□□□□□ -0.13
CNN1-207ENST00000588468 ADAMTS2O95450 1211 aa14.24□□□□□ -0.13
CNN1-207ENST00000588468 POLR3AO14802 1390 aaPredicted RBP14.23□□□□□ -0.13
CNN1-207ENST00000588468 SBNO2Q9Y2G9 1366 aa14.23□□□□□ -0.13
CNN1-207ENST00000588468 PMFBP1Q8TBY8 1022 aa14.23□□□□□ -0.13
CNN1-207ENST00000588468 NUDT16Q96DE0 195 aaKnown RBP14.23□□□□□ -0.13
CNN1-207ENST00000588468 CDK19Q9BWU1 502 aa14.23□□□□□ -0.13
CNN1-207ENST00000588468 PHRF1Q9P1Y6 1649 aaKnown RBP14.23□□□□□ -0.13
CNN1-207ENST00000588468 NGLY1Q96IV0 654 aa14.22□□□□□ -0.13
CNN1-207ENST00000588468 FNBP4Q8N3X1 1017 aaPredicted RBP14.21□□□□□ -0.13
CNN1-207ENST00000588468 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.13
CNN1-207ENST00000588468 CCDC61Q9Y6R9 512 aa14.21□□□□□ -0.13
CNN1-207ENST00000588468 CLSPNQ9HAW4 1339 aa14.2□□□□□ -0.14
CNN1-207ENST00000588468 AKAP12Q02952 1782 aa14.2□□□□□ -0.14
CNN1-207ENST00000588468 COL14A1Q05707 1796 aaKnown RBP14.2□□□□□ -0.14
CNN1-207ENST00000588468 NBPF8Q3BBV2 869 aa14.2□□□□□ -0.14
CNN1-207ENST00000588468 ATRNO75882 1429 aa14.2□□□□□ -0.14
CNN1-207ENST00000588468 PPIP5K1Q6PFW1 1433 aa14.2□□□□□ -0.14
CNN1-207ENST00000588468 SLIT2O94813 1529 aa14.2□□□□□ -0.14
CNN1-207ENST00000588468 NRAPQ86VF7 1730 aa14.19□□□□□ -0.14
CNN1-207ENST00000588468 BRD4O60885 1362 aaPredicted RBP14.19□□□□□ -0.14
CNN1-207ENST00000588468 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
CNN1-207ENST00000588468 PLEKHG3A1L390 1219 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms