RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 RBM33Q96EV2 1170 aaKnown RBP19.72■□□□□ 0.75
CCDC130-208ENST00000588071 TESK2Q96S53 571 aa19.72■□□□□ 0.75
CCDC130-208ENST00000588071 NKTRP30414 1462 aaKnown RBP19.72■□□□□ 0.75
CCDC130-208ENST00000588071 EVC2Q86UK5 1308 aa19.7■□□□□ 0.74
CCDC130-208ENST00000588071 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.69■□□□□ 0.74
CCDC130-208ENST00000588071 SBNO2Q9Y2G9 1366 aa19.69■□□□□ 0.74
CCDC130-208ENST00000588071 POLR3GLQ9BT43 218 aa19.68■□□□□ 0.74
CCDC130-208ENST00000588071 CDCA8Q53HL2 280 aa19.67■□□□□ 0.74
CCDC130-208ENST00000588071 C11orf95C9JLR9 678 aaPredicted RBP19.66■□□□□ 0.74
CCDC130-208ENST00000588071 CDK19Q9BWU1 502 aa19.66■□□□□ 0.74
CCDC130-208ENST00000588071 TMEM94Q12767 1356 aa19.66■□□□□ 0.74
CCDC130-208ENST00000588071 WASLO00401 505 aaPredicted RBP19.65■□□□□ 0.74
CCDC130-208ENST00000588071 SRPK2P78362 688 aaKnown RBP19.65■□□□□ 0.74
CCDC130-208ENST00000588071 DISP3Q9P2K9 1392 aa19.64■□□□□ 0.73
CCDC130-208ENST00000588071 NCOA3Q9Y6Q9 1424 aa19.64■□□□□ 0.73
CCDC130-208ENST00000588071 LRRC7Q96NW7 1537 aa19.64■□□□□ 0.73
CCDC130-208ENST00000588071 C19orf44Q9H6X5 657 aa19.63■□□□□ 0.73
CCDC130-208ENST00000588071 XIRP1Q702N8 1843 aaKnown RBP19.62■□□□□ 0.73
CCDC130-208ENST00000588071 NALCNQ8IZF0 1738 aa19.62■□□□□ 0.73
CCDC130-208ENST00000588071 CABP2Q9NPB3 220 aa19.62■□□□□ 0.73
CCDC130-208ENST00000588071 ADGRL3Q9HAR2 1447 aa19.61■□□□□ 0.73
CCDC130-208ENST00000588071 KIF7Q2M1P5 1343 aa19.6■□□□□ 0.73
CCDC130-208ENST00000588071 ATF3P18847 181 aa19.6■□□□□ 0.73
CCDC130-208ENST00000588071 LTBP4Q8N2S1 1624 aa19.6■□□□□ 0.73
CCDC130-208ENST00000588071 ADGRB2O60241 1585 aa19.6■□□□□ 0.73
CCDC130-208ENST00000588071 TULP4Q9NRJ4 1543 aa19.6■□□□□ 0.73
CCDC130-208ENST00000588071 MSH6P52701 1360 aa19.59■□□□□ 0.73
CCDC130-208ENST00000588071 WASHC2AQ641Q2 1341 aa19.59■□□□□ 0.73
CCDC130-208ENST00000588071 PUS7Q96PZ0 661 aaKnown RBP19.59■□□□□ 0.73
CCDC130-208ENST00000588071 CCDC7Q96M83 1385 aa19.58■□□□□ 0.73
CCDC130-208ENST00000588071 NUTM2FA1L443 756 aa19.58■□□□□ 0.72
CCDC130-208ENST00000588071 NUDT16Q96DE0 195 aaKnown RBP19.57■□□□□ 0.72
CCDC130-208ENST00000588071 CADPS2Q86UW7 1296 aa19.56■□□□□ 0.72
CCDC130-208ENST00000588071 TMC1Q8TDI8 760 aa19.56■□□□□ 0.72
CCDC130-208ENST00000588071 RGPD8O14715 1765 aaPredicted RBP19.55■□□□□ 0.72
CCDC130-208ENST00000588071 CDC42BPGQ6DT37 1551 aa19.55■□□□□ 0.72
CCDC130-208ENST00000588071 ATAD2Q6PL18 1390 aa19.55■□□□□ 0.72
CCDC130-208ENST00000588071 FMN2Q9NZ56 1722 aa19.54■□□□□ 0.72
CCDC130-208ENST00000588071 CCDC61Q9Y6R9 512 aa19.53■□□□□ 0.72
CCDC130-208ENST00000588071 DCCP43146 1447 aa19.51■□□□□ 0.71
CCDC130-208ENST00000588071 DDX10Q13206 875 aaKnown RBP19.51■□□□□ 0.71
CCDC130-208ENST00000588071 SLC12A5Q9H2X9 1139 aa19.51■□□□□ 0.71
CCDC130-208ENST00000588071 PRR36Q9H6K5 1346 aa19.51■□□□□ 0.71
CCDC130-208ENST00000588071 CABP1Q9NZU7 370 aa19.5■□□□□ 0.71
CCDC130-208ENST00000588071 ITSN1Q15811 1721 aa19.5■□□□□ 0.71
CCDC130-208ENST00000588071 ESCO1Q5FWF5 840 aa19.49■□□□□ 0.71
CCDC130-208ENST00000588071 ANKARQ7Z5J8 1434 aa19.49■□□□□ 0.71
CCDC130-208ENST00000588071 USP32Q8NFA0 1604 aa19.48■□□□□ 0.71
CCDC130-208ENST00000588071 PPIP5K1Q6PFW1 1433 aa19.48■□□□□ 0.71
CCDC130-208ENST00000588071 ATP7BP35670 1465 aa19.48■□□□□ 0.71
CCDC130-208ENST00000588071 NINLQ9Y2I6 1382 aa19.47■□□□□ 0.71
CCDC130-208ENST00000588071 CERKQ8TCT0 537 aa19.47■□□□□ 0.71
CCDC130-208ENST00000588071 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
CCDC130-208ENST00000588071 SLAIN2Q9P270 581 aa19.46■□□□□ 0.71
CCDC130-208ENST00000588071 MST1RQ04912 1400 aa19.45■□□□□ 0.7
CCDC130-208ENST00000588071 PLEKHG3A1L390 1219 aa19.45■□□□□ 0.7
CCDC130-208ENST00000588071 NGDNQ8NEJ9 315 aaKnown RBP19.45■□□□□ 0.7
CCDC130-208ENST00000588071 PANK3Q9H999 370 aa19.45■□□□□ 0.7
CCDC130-208ENST00000588071 TERF2IPQ9NYB0 399 aa19.45■□□□□ 0.7
CCDC130-208ENST00000588071 C1orf167Q5SNV9 1468 aa19.45■□□□□ 0.7
CCDC130-208ENST00000588071 MYOM1P52179 1685 aa19.45■□□□□ 0.7
CCDC130-208ENST00000588071 HDGFL2Q7Z4V5 671 aaPredicted RBP19.44■□□□□ 0.7
CCDC130-208ENST00000588071 ORAI2Q96SN7 254 aa19.44■□□□□ 0.7
CCDC130-208ENST00000588071 PHF8Q9UPP1 1060 aa19.44■□□□□ 0.7
CCDC130-208ENST00000588071 TOPAZ1Q8N9V7 1692 aa19.43■□□□□ 0.7
CCDC130-208ENST00000588071 TOM1O60784 492 aa19.43■□□□□ 0.7
CCDC130-208ENST00000588071 ZNF692Q9BU19 519 aaPredicted RBP19.42■□□□□ 0.7
CCDC130-208ENST00000588071 ACEP12821 1306 aa19.42■□□□□ 0.7
CCDC130-208ENST00000588071 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
CCDC130-208ENST00000588071 ANKRD36BQ8N2N9 1353 aa19.4■□□□□ 0.7
CCDC130-208ENST00000588071 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
CCDC130-208ENST00000588071 PSME1Q06323 249 aa19.39■□□□□ 0.69
CCDC130-208ENST00000588071 AKAP12Q02952 1782 aa19.39■□□□□ 0.69
CCDC130-208ENST00000588071 KIF1AQ12756 1690 aa19.38■□□□□ 0.69
CCDC130-208ENST00000588071 KNSTRNQ9Y448 316 aa19.38■□□□□ 0.69
CCDC130-208ENST00000588071 A0A1W2PP64 1363 aa19.37■□□□□ 0.69
CCDC130-208ENST00000588071 KTN1Q86UP2 1357 aaKnown RBP19.37■□□□□ 0.69
CCDC130-208ENST00000588071 FOXO3O43524 673 aa19.37■□□□□ 0.69
CCDC130-208ENST00000588071 POLR3AO14802 1390 aaPredicted RBP19.36■□□□□ 0.69
CCDC130-208ENST00000588071 BRINP3Q76B58 766 aa19.36■□□□□ 0.69
CCDC130-208ENST00000588071 CARD14Q9BXL6 1004 aa19.36■□□□□ 0.69
CCDC130-208ENST00000588071 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
CCDC130-208ENST00000588071 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
CCDC130-208ENST00000588071 PIP4K2BP78356 416 aa19.35■□□□□ 0.69
CCDC130-208ENST00000588071 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
CCDC130-208ENST00000588071 DIEXFQ68CQ4 756 aaKnown RBP19.34■□□□□ 0.69
CCDC130-208ENST00000588071 PER1O15534 1290 aaPredicted RBP19.33■□□□□ 0.68
CCDC130-208ENST00000588071 MON2Q7Z3U7 1717 aa19.33■□□□□ 0.68
CCDC130-208ENST00000588071 NSD3Q9BZ95 1437 aa19.33■□□□□ 0.68
CCDC130-208ENST00000588071 NPHP3Q7Z494 1330 aa19.32■□□□□ 0.68
CCDC130-208ENST00000588071 PAK3O75914 559 aaPredicted RBP19.32■□□□□ 0.68
CCDC130-208ENST00000588071 KRT28Q7Z3Y7 464 aa19.32■□□□□ 0.68
CCDC130-208ENST00000588071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.32■□□□□ 0.68
CCDC130-208ENST00000588071 ROBO1Q9Y6N7 1651 aa19.31■□□□□ 0.68
CCDC130-208ENST00000588071 XPCQ01831 940 aaPredicted RBP19.31■□□□□ 0.68
CCDC130-208ENST00000588071 CNGB1Q14028 1251 aaPredicted RBP19.31■□□□□ 0.68
CCDC130-208ENST00000588071 DDX17Q92841 729 aaKnown RBP19.31■□□□□ 0.68
CCDC130-208ENST00000588071 USP6P35125 1406 aa19.3■□□□□ 0.68
CCDC130-208ENST00000588071 CGNL1Q0VF96 1302 aa19.29■□□□□ 0.68
CCDC130-208ENST00000588071 TTC21BQ7Z4L5 1316 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms