RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
DDX39A-206ENST00000587730 NSD2O96028 1365 aa23.98■■□□□ 1.43
DDX39A-206ENST00000587730 KIDINS220Q9ULH0 1771 aa23.98■■□□□ 1.43
DDX39A-206ENST00000587730 WWC1Q8IX03 1113 aa23.98■■□□□ 1.43
DDX39A-206ENST00000587730 RUNDC1Q96C34 613 aa23.98■■□□□ 1.43
DDX39A-206ENST00000587730 NEO1Q92859 1461 aa23.97■■□□□ 1.43
DDX39A-206ENST00000587730 MROH2AA6NES4 1674 aa23.97■■□□□ 1.43
DDX39A-206ENST00000587730 WDR63Q8IWG1 891 aa23.97■■□□□ 1.43
DDX39A-206ENST00000587730 NOS1P29475 1434 aa23.97■■□□□ 1.43
DDX39A-206ENST00000587730 CCDC27Q2M243 656 aa23.96■■□□□ 1.43
DDX39A-206ENST00000587730 MORC1Q86VD1 984 aa23.96■■□□□ 1.43
DDX39A-206ENST00000587730 C14orf93Q9H972 538 aaKnown RBP23.96■■□□□ 1.43
DDX39A-206ENST00000587730 CFAP53Q96M91 514 aa23.96■■□□□ 1.43
DDX39A-206ENST00000587730 SPINK5Q9NQ38 1064 aaPredicted RBP23.96■■□□□ 1.43
DDX39A-206ENST00000587730 NSD3Q9BZ95 1437 aa23.95■■□□□ 1.43
DDX39A-206ENST00000587730 ZC3H13Q5T200 1668 aaKnown RBP23.95■■□□□ 1.42
DDX39A-206ENST00000587730 CLUAP1Q96AJ1 413 aa23.95■■□□□ 1.42
DDX39A-206ENST00000587730 CANXP27824 592 aaKnown RBP23.94■■□□□ 1.42
DDX39A-206ENST00000587730 BCAR3O75815 825 aa23.94■■□□□ 1.42
DDX39A-206ENST00000587730 PMFBP1Q8TBY8 1022 aa23.94■■□□□ 1.42
DDX39A-206ENST00000587730 IQSEC2Q5JU85 1478 aa23.93■■□□□ 1.42
DDX39A-206ENST00000587730 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
DDX39A-206ENST00000587730 ADGRB1O14514 1584 aa23.92■■□□□ 1.42
DDX39A-206ENST00000587730 PPLO60437 1756 aa23.92■■□□□ 1.42
DDX39A-206ENST00000587730 MLH3Q9UHC1 1453 aa23.92■■□□□ 1.42
DDX39A-206ENST00000587730 SHPRHQ149N8 1683 aa23.91■■□□□ 1.42
DDX39A-206ENST00000587730 QRICH2Q9H0J4 1663 aa23.91■■□□□ 1.42
DDX39A-206ENST00000587730 SKAP1Q86WV1 359 aa23.91■■□□□ 1.42
DDX39A-206ENST00000587730 RAPGEF3O95398 923 aa23.91■■□□□ 1.42
DDX39A-206ENST00000587730 RGS3P49796 1198 aa23.9■■□□□ 1.42
DDX39A-206ENST00000587730 NFKBIBQ15653 356 aa23.89■■□□□ 1.42
DDX39A-206ENST00000587730 VIRMAQ69YN4 1812 aaKnown RBP23.89■■□□□ 1.42
DDX39A-206ENST00000587730 NPATQ14207 1427 aa23.88■■□□□ 1.41
DDX39A-206ENST00000587730 POGZQ7Z3K3 1410 aa23.88■■□□□ 1.41
DDX39A-206ENST00000587730 CT47B1P0C2W7 299 aaPredicted RBP23.88■■□□□ 1.41
DDX39A-206ENST00000587730 HECW2Q9P2P5 1572 aa23.88■■□□□ 1.41
DDX39A-206ENST00000587730 GSE1Q14687 1217 aa23.87■■□□□ 1.41
DDX39A-206ENST00000587730 MYH16Q9H6N6 1097 aa23.87■■□□□ 1.41
DDX39A-206ENST00000587730 EVC2Q86UK5 1308 aa23.85■■□□□ 1.41
DDX39A-206ENST00000587730 ANKRD36BQ8N2N9 1353 aa23.85■■□□□ 1.41
DDX39A-206ENST00000587730 RARSP54136 660 aaKnown RBP23.84■■□□□ 1.41
DDX39A-206ENST00000587730 BECN1Q14457 450 aa23.84■■□□□ 1.41
DDX39A-206ENST00000587730 TCP11L2Q8N4U5 519 aa23.84■■□□□ 1.41
DDX39A-206ENST00000587730 IGHDP01880 384 aa23.82■■□□□ 1.4
DDX39A-206ENST00000587730 TRAK1Q9UPV9 953 aa23.82■■□□□ 1.4
DDX39A-206ENST00000587730 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
DDX39A-206ENST00000587730 RICTORQ6R327 1708 aa23.82■■□□□ 1.4
DDX39A-206ENST00000587730 VGFO15240 615 aaPredicted RBP23.82■■□□□ 1.4
DDX39A-206ENST00000587730 FRMPD1Q5SYB0 1578 aa23.82■■□□□ 1.4
DDX39A-206ENST00000587730 ABCC3O15438 1527 aa23.81■■□□□ 1.4
DDX39A-206ENST00000587730 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
DDX39A-206ENST00000587730 UPF2Q9HAU5 1272 aaKnown RBP23.8■■□□□ 1.4
DDX39A-206ENST00000587730 SLC12A5Q9H2X9 1139 aa23.8■■□□□ 1.4
DDX39A-206ENST00000587730 COG6Q9Y2V7 657 aa23.8■■□□□ 1.4
DDX39A-206ENST00000587730 RWDD1Q9H446 243 aaPredicted RBP23.79■■□□□ 1.4
DDX39A-206ENST00000587730 ZFYVE9O95405 1425 aa23.78■■□□□ 1.4
DDX39A-206ENST00000587730 MTHFSP49914 203 aa23.77■■□□□ 1.4
DDX39A-206ENST00000587730 PANK1Q8TE04 598 aa23.77■■□□□ 1.4
DDX39A-206ENST00000587730 ADGRB2O60241 1585 aa23.77■■□□□ 1.4
DDX39A-206ENST00000587730 PIK3C2BO00750 1634 aa23.76■■□□□ 1.39
DDX39A-206ENST00000587730 ARHGAP31Q2M1Z3 1444 aa23.76■■□□□ 1.39
DDX39A-206ENST00000587730 KDM4FA0A1W2PPD8 638 aa23.75■■□□□ 1.39
DDX39A-206ENST00000587730 FRAT1Q92837 279 aaPredicted RBP23.75■■□□□ 1.39
DDX39A-206ENST00000587730 CAMSAP1Q5T5Y3 1602 aa23.75■■□□□ 1.39
DDX39A-206ENST00000587730 SLC4A3P48751 1232 aa23.73■■□□□ 1.39
DDX39A-206ENST00000587730 ABCC11Q96J66 1382 aa23.73■■□□□ 1.39
DDX39A-206ENST00000587730 TULP4Q9NRJ4 1543 aa23.73■■□□□ 1.39
DDX39A-206ENST00000587730 USP19O94966 1318 aa23.72■■□□□ 1.39
DDX39A-206ENST00000587730 ARHGEF28Q8N1W1 1705 aaKnown RBP23.72■■□□□ 1.39
DDX39A-206ENST00000587730 MED14O60244 1454 aa23.72■■□□□ 1.39
DDX39A-206ENST00000587730 NEXMIFQ5QGS0 1516 aa23.71■■□□□ 1.39
DDX39A-206ENST00000587730 IL16Q14005 1332 aa23.7■■□□□ 1.39
DDX39A-206ENST00000587730 NEUROD2Q15784 382 aa23.7■■□□□ 1.38
DDX39A-206ENST00000587730 ZKSCAN2Q63HK3 967 aa23.7■■□□□ 1.38
DDX39A-206ENST00000587730 PNNQ9H307 717 aaKnown RBP23.7■■□□□ 1.38
DDX39A-206ENST00000587730 GGT6Q6P531 493 aa23.69■■□□□ 1.38
DDX39A-206ENST00000587730 YEATS2Q9ULM3 1422 aa23.68■■□□□ 1.38
DDX39A-206ENST00000587730 ATAD2Q6PL18 1390 aa23.68■■□□□ 1.38
DDX39A-206ENST00000587730 TNNT2P45379 298 aaPredicted RBP23.68■■□□□ 1.38
DDX39A-206ENST00000587730 MVPQ14764 893 aaKnown RBP23.68■■□□□ 1.38
DDX39A-206ENST00000587730 DIP2CQ9Y2E4 1556 aa23.68■■□□□ 1.38
DDX39A-206ENST00000587730 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
DDX39A-206ENST00000587730 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.382e-6■□□□□ 8.3
DDX39A-206ENST00000587730 SLC52A1Q9NWF4 448 aa23.68■■□□□ 1.38
DDX39A-206ENST00000587730 RRP7AQ9Y3A4 280 aaKnown RBP23.68■■□□□ 1.38
DDX39A-206ENST00000587730 TMEM132EQ6IEE7 984 aa23.67■■□□□ 1.38
DDX39A-206ENST00000587730 NLRP1Q9C000 1473 aa23.67■■□□□ 1.38
DDX39A-206ENST00000587730 PCDHB15Q9Y5E8 787 aa23.66■■□□□ 1.38
DDX39A-206ENST00000587730 FTSJ3Q8IY81 847 aaKnown RBP23.65■■□□□ 1.38
DDX39A-206ENST00000587730 DZIP1LQ8IYY4 767 aaKnown RBP23.65■■□□□ 1.38
DDX39A-206ENST00000587730 TBC1D32Q96NH3 1257 aa23.64■■□□□ 1.38
DDX39A-206ENST00000587730 TERF2IPQ9NYB0 399 aa23.63■■□□□ 1.37
DDX39A-206ENST00000587730 PDZRN3Q9UPQ7 1066 aa23.63■■□□□ 1.37
DDX39A-206ENST00000587730 RLBP1P12271 317 aa23.63■■□□□ 1.37
DDX39A-206ENST00000587730 FRAT2O75474 233 aaPredicted RBP23.62■■□□□ 1.37
DDX39A-206ENST00000587730 DDX19BQ9UMR2 479 aa23.62■■□□□ 1.37
DDX39A-206ENST00000587730 HDAC1Q13547 482 aaPredicted RBP23.61■■□□□ 1.37
DDX39A-206ENST00000587730 COL3A1P02461 1466 aaPredicted RBP23.59■■□□□ 1.37
DDX39A-206ENST00000587730 A0A1W2PP64 1363 aa23.59■■□□□ 1.37
DDX39A-206ENST00000587730 ANKRD26Q9UPS8 1709 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms