RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 RXRBP28702 533 aa25.26■■□□□ 1.63
SF3A2-203ENST00000587637 UPF1Q92900 1129 aaKnown RBP eCLIP25.26■■□□□ 1.63
SF3A2-203ENST00000587637 CDK12Q9NYV4 1490 aaPredicted RBP25.25■■□□□ 1.63
SF3A2-203ENST00000587637 SOS2Q07890 1332 aaPredicted RBP25.24■■□□□ 1.63
SF3A2-203ENST00000587637 STK26Q9P289 416 aa25.24■■□□□ 1.63
SF3A2-203ENST00000587637 PIK3C2GO75747 1445 aa25.23■■□□□ 1.63
SF3A2-203ENST00000587637 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
SF3A2-203ENST00000587637 PXDNQ92626 1479 aa25.22■■□□□ 1.63
SF3A2-203ENST00000587637 MPHOSPH9Q99550 1183 aa25.22■■□□□ 1.63
SF3A2-203ENST00000587637 TECPR2O15040 1411 aa25.21■■□□□ 1.63
SF3A2-203ENST00000587637 NUTM2FA1L443 756 aa25.21■■□□□ 1.63
SF3A2-203ENST00000587637 XPCQ01831 940 aaPredicted RBP25.21■■□□□ 1.63
SF3A2-203ENST00000587637 WAPLQ7Z5K2 1190 aa25.21■■□□□ 1.63
SF3A2-203ENST00000587637 TMEM132EQ6IEE7 984 aa25.2■■□□□ 1.62
SF3A2-203ENST00000587637 LRPPRCP42704 1394 aaKnown RBP25.19■■□□□ 1.62
SF3A2-203ENST00000587637 MARF1Q9Y4F3 1742 aaKnown RBP25.19■■□□□ 1.62
SF3A2-203ENST00000587637 MYOM2P54296 1465 aa25.19■■□□□ 1.62
SF3A2-203ENST00000587637 RGPD8O14715 1765 aaPredicted RBP25.18■■□□□ 1.62
SF3A2-203ENST00000587637 ESCO1Q5FWF5 840 aa25.16■■□□□ 1.62
SF3A2-203ENST00000587637 QTRT2Q9H974 415 aaKnown RBP25.16■■□□□ 1.62
SF3A2-203ENST00000587637 ANKRD30BQ9BXX2 1392 aa25.16■■□□□ 1.62
SF3A2-203ENST00000587637 YTHDC2Q9H6S0 1430 aaKnown RBP25.14■■□□□ 1.62
SF3A2-203ENST00000587637 NGLY1Q96IV0 654 aa25.14■■□□□ 1.62
SF3A2-203ENST00000587637 RBM6P78332 1123 aaKnown RBP25.12■■□□□ 1.61
SF3A2-203ENST00000587637 KIF1AQ12756 1690 aa25.11■■□□□ 1.61
SF3A2-203ENST00000587637 NRXN1Q9ULB1 1477 aa25.11■■□□□ 1.61
SF3A2-203ENST00000587637 ABCC11Q96J66 1382 aa25.1■■□□□ 1.61
SF3A2-203ENST00000587637 FOXO3O43524 673 aa25.1■■□□□ 1.61
SF3A2-203ENST00000587637 ATRNO75882 1429 aa25.1■■□□□ 1.61
SF3A2-203ENST00000587637 NPHP3Q7Z494 1330 aa25.1■■□□□ 1.61
SF3A2-203ENST00000587637 USP21Q9UK80 565 aa25.09■■□□□ 1.61
SF3A2-203ENST00000587637 RAB3GAP2Q9H2M9 1393 aa25.06■■□□□ 1.6
SF3A2-203ENST00000587637 ABCA3Q99758 1704 aa25.06■■□□□ 1.6
SF3A2-203ENST00000587637 EP400Q96L91 3159 aa25.05■■□□□ 1.6
SF3A2-203ENST00000587637 USP32Q8NFA0 1604 aa25.04■■□□□ 1.6
SF3A2-203ENST00000587637 BCL9LQ86UU0 1499 aa25.04■■□□□ 1.6
SF3A2-203ENST00000587637 CFAP70Q5T0N1 1121 aa25.04■■□□□ 1.6
SF3A2-203ENST00000587637 SAFB2Q14151 953 aaKnown RBP eCLIP25.03■■□□□ 1.6
SF3A2-203ENST00000587637 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.03■■□□□ 1.6
SF3A2-203ENST00000587637 FNBP4Q8N3X1 1017 aaPredicted RBP25.02■■□□□ 1.6
SF3A2-203ENST00000587637 ADGRB1O14514 1584 aa25.01■■□□□ 1.59
SF3A2-203ENST00000587637 C14orf93Q9H972 538 aaKnown RBP25■■□□□ 1.59
SF3A2-203ENST00000587637 TRPC5Q9UL62 973 aaPredicted RBP25■■□□□ 1.59
SF3A2-203ENST00000587637 GLI3P10071 1580 aa25■■□□□ 1.59
SF3A2-203ENST00000587637 PLEKHG5O94827 1062 aa24.99■■□□□ 1.59
SF3A2-203ENST00000587637 PLCH1Q4KWH8 1693 aa24.98■■□□□ 1.59
SF3A2-203ENST00000587637 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
SF3A2-203ENST00000587637 TNS3Q68CZ2 1445 aa24.96■■□□□ 1.59
SF3A2-203ENST00000587637 SPATA31A3Q5VYP0 1347 aa24.96■■□□□ 1.59
SF3A2-203ENST00000587637 PRAM1Q96QH2 718 aa24.96■■□□□ 1.59
SF3A2-203ENST00000587637 DLC1Q96QB1 1528 aa24.96■■□□□ 1.59
SF3A2-203ENST00000587637 ATAD2Q6PL18 1390 aa24.95■■□□□ 1.59
SF3A2-203ENST00000587637 BRWD3Q6RI45 1802 aa24.95■■□□□ 1.58
SF3A2-203ENST00000587637 SLIT2O94813 1529 aa24.94■■□□□ 1.58
SF3A2-203ENST00000587637 DHX57Q6P158 1386 aaKnown RBP24.93■■□□□ 1.58
SF3A2-203ENST00000587637 TRPM3Q9HCF6 1732 aaPredicted RBP24.93■■□□□ 1.58
SF3A2-203ENST00000587637 RALGAPBQ86X10 1494 aa24.92■■□□□ 1.58
SF3A2-203ENST00000587637 KRT28Q7Z3Y7 464 aa24.92■■□□□ 1.58
SF3A2-203ENST00000587637 CABLES1Q8TDN4 633 aa24.92■■□□□ 1.58
SF3A2-203ENST00000587637 PHF8Q9UPP1 1060 aa24.92■■□□□ 1.58
SF3A2-203ENST00000587637 HIRIP3Q9BW71 556 aaPredicted RBP24.89■■□□□ 1.58
SF3A2-203ENST00000587637 ARHGEF28Q8N1W1 1705 aaKnown RBP24.89■■□□□ 1.57
SF3A2-203ENST00000587637 SIRT1Q96EB6 747 aa24.88■■□□□ 1.57
SF3A2-203ENST00000587637 SRCAPQ6ZRS2 3230 aa24.88■■□□□ 1.57
SF3A2-203ENST00000587637 NRAPQ86VF7 1730 aa24.87■■□□□ 1.57
SF3A2-203ENST00000587637 PMFBP1Q8TBY8 1022 aa24.87■■□□□ 1.57
SF3A2-203ENST00000587637 ALS2Q96Q42 1657 aa24.86■■□□□ 1.57
SF3A2-203ENST00000587637 GJD4Q96KN9 370 aaPredicted RBP24.86■■□□□ 1.57
SF3A2-203ENST00000587637 TRAK1Q9UPV9 953 aa24.86■■□□□ 1.57
SF3A2-203ENST00000587637 NWD2Q9ULI1 1742 aa24.86■■□□□ 1.57
SF3A2-203ENST00000587637 POGKQ9P215 609 aa24.85■■□□□ 1.57
SF3A2-203ENST00000587637 KDM2AQ9Y2K7 1162 aa24.85■■□□□ 1.57
SF3A2-203ENST00000587637 ANKARQ7Z5J8 1434 aa24.85■■□□□ 1.57
SF3A2-203ENST00000587637 MINK1Q8N4C8 1332 aaPredicted RBP24.85■■□□□ 1.57
SF3A2-203ENST00000587637 PRR36Q9H6K5 1346 aa24.85■■□□□ 1.57
SF3A2-203ENST00000587637 CRYBG1Q9Y4K1 1723 aa24.84■■□□□ 1.57
SF3A2-203ENST00000587637 UNC5CLQ8IV45 518 aa24.84■■□□□ 1.57
SF3A2-203ENST00000587637 SBNO1A3KN83 1393 aa24.83■■□□□ 1.57
SF3A2-203ENST00000587637 TULP4Q9NRJ4 1543 aa24.83■■□□□ 1.57
SF3A2-203ENST00000587637 LMOD2Q6P5Q4 547 aa24.83■■□□□ 1.57
SF3A2-203ENST00000587637 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
SF3A2-203ENST00000587637 DCAF11Q8TEB1 546 aa24.79■■□□□ 1.56
SF3A2-203ENST00000587637 ARHGEF10O15013 1369 aa24.77■■□□□ 1.56
SF3A2-203ENST00000587637 PSME1Q06323 249 aa24.76■■□□□ 1.55
SF3A2-203ENST00000587637 ITSN1Q15811 1721 aa24.75■■□□□ 1.55
SF3A2-203ENST00000587637 ACIN1Q9UKV3 1341 aaKnown RBP24.75■■□□□ 1.55
SF3A2-203ENST00000587637 ATP7BP35670 1465 aa24.75■■□□□ 1.55
SF3A2-203ENST00000587637 TOPAZ1Q8N9V7 1692 aa24.73■■□□□ 1.55
SF3A2-203ENST00000587637 COL14A1Q05707 1796 aaKnown RBP24.72■■□□□ 1.55
SF3A2-203ENST00000587637 PHRF1Q9P1Y6 1649 aaKnown RBP24.72■■□□□ 1.55
SF3A2-203ENST00000587637 CCDC9Q9Y3X0 531 aaKnown RBP24.72■■□□□ 1.55
SF3A2-203ENST00000587637 FAM83GA6ND36 823 aa24.71■■□□□ 1.55
SF3A2-203ENST00000587637 VPS72Q15906 364 aa24.71■■□□□ 1.55
SF3A2-203ENST00000587637 SEPT12Q8IYM1 358 aa24.71■■□□□ 1.55
SF3A2-203ENST00000587637 WASLO00401 505 aaPredicted RBP24.7■■□□□ 1.54
SF3A2-203ENST00000587637 DEFB132Q7Z7B7 95 aa24.69■■□□□ 1.54
SF3A2-203ENST00000587637 BLMP54132 1417 aaPredicted RBP24.69■■□□□ 1.54
SF3A2-203ENST00000587637 EIF3AQ14152 1382 aaKnown RBP24.67■■□□□ 1.54
SF3A2-203ENST00000587637 GPRASP1Q5JY77 1395 aa24.67■■□□□ 1.54
SF3A2-203ENST00000587637 KIAA1210Q9ULL0 1709 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 1521.2 ms