RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 CLTCL1P53675 1640 aa13.1□□□□□ -0.31
SDF2-204ENST00000587338 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.32
SDF2-204ENST00000587338 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
SDF2-204ENST00000587338 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
SDF2-204ENST00000587338 ESCO1Q5FWF5 840 aa13.07□□□□□ -0.32
SDF2-204ENST00000587338 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
SDF2-204ENST00000587338 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
SDF2-204ENST00000587338 PXDNQ92626 1479 aa13.05□□□□□ -0.32
SDF2-204ENST00000587338 MARF1Q9Y4F3 1742 aaKnown RBP13.05□□□□□ -0.32
SDF2-204ENST00000587338 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
SDF2-204ENST00000587338 KIF1BO60333 1816 aa13.04□□□□□ -0.32
SDF2-204ENST00000587338 CDC42BPGQ6DT37 1551 aa13.04□□□□□ -0.32
SDF2-204ENST00000587338 VGFO15240 615 aaPredicted RBP13.04□□□□□ -0.32
SDF2-204ENST00000587338 FOXO3O43524 673 aa13.04□□□□□ -0.32
SDF2-204ENST00000587338 DEFB132Q7Z7B7 95 aa13.04□□□□□ -0.32
SDF2-204ENST00000587338 RALGAPBQ86X10 1494 aa13.04□□□□□ -0.32
SDF2-204ENST00000587338 GLI3P10071 1580 aa13.03□□□□□ -0.32
SDF2-204ENST00000587338 NUTM2FA1L443 756 aa13.02□□□□□ -0.33
SDF2-204ENST00000587338 SF3B2Q13435 895 aaKnown RBP13.02□□□□□ -0.33
SDF2-204ENST00000587338 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.33
SDF2-204ENST00000587338 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.33
SDF2-204ENST00000587338 LRPPRCP42704 1394 aaKnown RBP13.01□□□□□ -0.33
SDF2-204ENST00000587338 SLIT2O94813 1529 aa13□□□□□ -0.33
SDF2-204ENST00000587338 NAIPQ13075 1403 aa13□□□□□ -0.33
SDF2-204ENST00000587338 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
SDF2-204ENST00000587338 LRP5O75197 1615 aa12.99□□□□□ -0.33
SDF2-204ENST00000587338 RPGRIP1LQ68CZ1 1315 aa12.98□□□□□ -0.33
SDF2-204ENST00000587338 BRWD3Q6RI45 1802 aa12.98□□□□□ -0.33
SDF2-204ENST00000587338 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
SDF2-204ENST00000587338 USP32Q8NFA0 1604 aa12.98□□□□□ -0.33
SDF2-204ENST00000587338 PSDA5PKW4 1024 aaPredicted RBP12.97□□□□□ -0.33
SDF2-204ENST00000587338 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
SDF2-204ENST00000587338 STK26Q9P289 416 aa12.97□□□□□ -0.33
SDF2-204ENST00000587338 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
SDF2-204ENST00000587338 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.33
SDF2-204ENST00000587338 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.33
SDF2-204ENST00000587338 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.33
SDF2-204ENST00000587338 PPLO60437 1756 aa12.96□□□□□ -0.34
SDF2-204ENST00000587338 A0A0G2JS52 829 aa12.95□□□□□ -0.34
SDF2-204ENST00000587338 MYT1Q01538 1121 aa12.95□□□□□ -0.34
SDF2-204ENST00000587338 PPARGC1BQ86YN6 1023 aaKnown RBP12.95□□□□□ -0.34
SDF2-204ENST00000587338 VPS72Q15906 364 aa12.94□□□□□ -0.34
SDF2-204ENST00000587338 KRT27Q7Z3Y8 459 aa12.94□□□□□ -0.34
SDF2-204ENST00000587338 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
SDF2-204ENST00000587338 BAG6P46379 1132 aa12.93□□□□□ -0.34
SDF2-204ENST00000587338 KRT28Q7Z3Y7 464 aa12.93□□□□□ -0.34
SDF2-204ENST00000587338 CABLES1Q8TDN4 633 aa12.93□□□□□ -0.34
SDF2-204ENST00000587338 TECPR2O15040 1411 aa12.93□□□□□ -0.34
SDF2-204ENST00000587338 TNS3Q68CZ2 1445 aa12.93□□□□□ -0.34
SDF2-204ENST00000587338 PLEKHH1Q9ULM0 1364 aa12.93□□□□□ -0.34
SDF2-204ENST00000587338 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
SDF2-204ENST00000587338 ADGRF5Q8IZF2 1346 aa12.92□□□□□ -0.34
SDF2-204ENST00000587338 HRCP23327 699 aa12.92□□□□□ -0.34
SDF2-204ENST00000587338 FMN2Q9NZ56 1722 aa12.92□□□□□ -0.34
SDF2-204ENST00000587338 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
SDF2-204ENST00000587338 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
SDF2-204ENST00000587338 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
SDF2-204ENST00000587338 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
SDF2-204ENST00000587338 TMEM132EQ6IEE7 984 aa12.9□□□□□ -0.34
SDF2-204ENST00000587338 NWD2Q9ULI1 1742 aa12.9□□□□□ -0.34
SDF2-204ENST00000587338 PSME1Q06323 249 aa12.89□□□□□ -0.35
SDF2-204ENST00000587338 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
SDF2-204ENST00000587338 ABCC11Q96J66 1382 aa12.89□□□□□ -0.35
SDF2-204ENST00000587338 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
SDF2-204ENST00000587338 FAM98CQ17RN3 349 aaKnown RBP12.88□□□□□ -0.35
SDF2-204ENST00000587338 RGL3Q3MIN7 710 aa12.88□□□□□ -0.35
SDF2-204ENST00000587338 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
SDF2-204ENST00000587338 ARHGEF10O15013 1369 aa12.87□□□□□ -0.35
SDF2-204ENST00000587338 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
SDF2-204ENST00000587338 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
SDF2-204ENST00000587338 R3HDM1Q15032 1099 aaKnown RBP12.87□□□□□ -0.35
SDF2-204ENST00000587338 YTHDC2Q9H6S0 1430 aaKnown RBP12.87□□□□□ -0.35
SDF2-204ENST00000587338 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
SDF2-204ENST00000587338 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
SDF2-204ENST00000587338 IFT172Q9UG01 1749 aa12.86□□□□□ -0.35
SDF2-204ENST00000587338 FAM182BQ5T319 152 aa12.86□□□□□ -0.35
SDF2-204ENST00000587338 PIK3C2GO75747 1445 aa12.85□□□□□ -0.35
SDF2-204ENST00000587338 NRXN1Q9ULB1 1477 aa12.85□□□□□ -0.35
SDF2-204ENST00000587338 RGPD8O14715 1765 aaPredicted RBP12.84□□□□□ -0.35
SDF2-204ENST00000587338 BTG4Q9NY30 223 aa12.84□□□□□ -0.35
SDF2-204ENST00000587338 RGPD1P0DJD0 1748 aa12.84□□□□□ -0.35
SDF2-204ENST00000587338 NRAPQ86VF7 1730 aa12.83□□□□□ -0.36
SDF2-204ENST00000587338 SPATA31E1Q6ZUB1 1445 aa12.83□□□□□ -0.36
SDF2-204ENST00000587338 SAFB2Q14151 953 aaKnown RBP eCLIP12.83□□□□□ -0.36
SDF2-204ENST00000587338 PMFBP1Q8TBY8 1022 aa12.82□□□□□ -0.36
SDF2-204ENST00000587338 DISP2A7MBM2 1401 aa12.8□□□□□ -0.36
SDF2-204ENST00000587338 EZH2Q15910 746 aaKnown RBP12.8□□□□□ -0.36
SDF2-204ENST00000587338 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
SDF2-204ENST00000587338 PRAM1Q96QH2 718 aa12.8□□□□□ -0.36
SDF2-204ENST00000587338 SPATA31A5Q5VU36 1347 aa12.8□□□□□ -0.36
SDF2-204ENST00000587338 SPATA31A7Q8IWB4 1347 aa12.8□□□□□ -0.36
SDF2-204ENST00000587338 TNS1Q9HBL0 1735 aaKnown RBP12.79□□□□□ -0.36
SDF2-204ENST00000587338 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
SDF2-204ENST00000587338 ADGRB2O60241 1585 aa12.79□□□□□ -0.36
SDF2-204ENST00000587338 DHX57Q6P158 1386 aaKnown RBP12.79□□□□□ -0.36
SDF2-204ENST00000587338 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
SDF2-204ENST00000587338 THSD7AQ9UPZ6 1657 aa12.78□□□□□ -0.36
SDF2-204ENST00000587338 YY1P25490 414 aa12.78□□□□□ -0.36
SDF2-204ENST00000587338 GPRASP1Q5JY77 1395 aa12.78□□□□□ -0.36
SDF2-204ENST00000587338 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms