RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 XRN1Q8IZH2 1706 aaKnown RBP9.35□□□□□ -0.91
NPC1-206ENST00000587223 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
NPC1-206ENST00000587223 XIRP1Q702N8 1843 aaKnown RBP9.35□□□□□ -0.91
NPC1-206ENST00000587223 LAMC1P11047 1609 aa9.34□□□□□ -0.91
NPC1-206ENST00000587223 PTCH1Q13635 1447 aa9.34□□□□□ -0.91
NPC1-206ENST00000587223 SAFB2Q14151 953 aaKnown RBP eCLIP9.34□□□□□ -0.91
NPC1-206ENST00000587223 PRAM1Q96QH2 718 aa9.34□□□□□ -0.91
NPC1-206ENST00000587223 TECPR2O15040 1411 aa9.33□□□□□ -0.92
NPC1-206ENST00000587223 ASXL1Q8IXJ9 1541 aa9.33□□□□□ -0.92
NPC1-206ENST00000587223 PLEKHH1Q9ULM0 1364 aa9.33□□□□□ -0.92
NPC1-206ENST00000587223 FAM135BQ49AJ0 1406 aa9.32□□□□□ -0.92
NPC1-206ENST00000587223 ROCK2O75116 1388 aaKnown RBP9.32□□□□□ -0.92
NPC1-206ENST00000587223 ADGRB1O14514 1584 aa9.32□□□□□ -0.92
NPC1-206ENST00000587223 ADGRL3Q9HAR2 1447 aa9.31□□□□□ -0.92
NPC1-206ENST00000587223 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.31□□□□□ -0.92
NPC1-206ENST00000587223 KIAA1210Q9ULL0 1709 aa9.31□□□□□ -0.92
NPC1-206ENST00000587223 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
NPC1-206ENST00000587223 NUTM2FA1L443 756 aa9.3□□□□□ -0.92
NPC1-206ENST00000587223 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
NPC1-206ENST00000587223 CARD11Q9BXL7 1154 aa9.3□□□□□ -0.92
NPC1-206ENST00000587223 DLC1Q96QB1 1528 aa9.3□□□□□ -0.92
NPC1-206ENST00000587223 DCCP43146 1447 aa9.3□□□□□ -0.92
NPC1-206ENST00000587223 KNDC1Q76NI1 1749 aa9.29□□□□□ -0.92
NPC1-206ENST00000587223 HSPA1LP34931 641 aa9.29□□□□□ -0.92
NPC1-206ENST00000587223 HIRIP3Q9BW71 556 aaPredicted RBP9.29□□□□□ -0.92
NPC1-206ENST00000587223 ESCO1Q5FWF5 840 aa9.28□□□□□ -0.92
NPC1-206ENST00000587223 BRINP3Q76B58 766 aa9.28□□□□□ -0.92
NPC1-206ENST00000587223 CENPJQ9HC77 1338 aaPredicted RBP9.28□□□□□ -0.92
NPC1-206ENST00000587223 WASLO00401 505 aaPredicted RBP9.27□□□□□ -0.93
NPC1-206ENST00000587223 ORAI2Q96SN7 254 aa9.27□□□□□ -0.93
NPC1-206ENST00000587223 MST1RQ04912 1400 aa9.27□□□□□ -0.93
NPC1-206ENST00000587223 NALCNQ8IZF0 1738 aa9.27□□□□□ -0.93
NPC1-206ENST00000587223 TRPM1Q7Z4N2 1603 aa9.27□□□□□ -0.93
NPC1-206ENST00000587223 CDK19Q9BWU1 502 aa9.26□□□□□ -0.93
NPC1-206ENST00000587223 C1orf167Q5SNV9 1468 aa9.26□□□□□ -0.93
NPC1-206ENST00000587223 EIF3AQ14152 1382 aaKnown RBP9.25□□□□□ -0.93
NPC1-206ENST00000587223 GPRASP1Q5JY77 1395 aa9.25□□□□□ -0.93
NPC1-206ENST00000587223 ROBO1Q9Y6N7 1651 aa9.24□□□□□ -0.93
NPC1-206ENST00000587223 RALGAPBQ86X10 1494 aa9.24□□□□□ -0.93
NPC1-206ENST00000587223 FOXO3O43524 673 aa9.24□□□□□ -0.93
NPC1-206ENST00000587223 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
NPC1-206ENST00000587223 CDC42BPGQ6DT37 1551 aa9.24□□□□□ -0.93
NPC1-206ENST00000587223 ARHGEF28Q8N1W1 1705 aaKnown RBP9.23□□□□□ -0.93
NPC1-206ENST00000587223 PMFBP1Q8TBY8 1022 aa9.23□□□□□ -0.93
NPC1-206ENST00000587223 DDX17Q92841 729 aaKnown RBP9.23□□□□□ -0.93
NPC1-206ENST00000587223 NUDT16Q96DE0 195 aaKnown RBP9.23□□□□□ -0.93
NPC1-206ENST00000587223 PHF8Q9UPP1 1060 aa9.23□□□□□ -0.93
NPC1-206ENST00000587223 EVC2Q86UK5 1308 aa9.23□□□□□ -0.93
NPC1-206ENST00000587223 ST20-MTHFSA0A0A6YYL1 179 aa9.22□□□□□ -0.93
NPC1-206ENST00000587223 PSME1Q06323 249 aa9.22□□□□□ -0.93
NPC1-206ENST00000587223 LRRC59Q96AG4 307 aaKnown RBP9.22□□□□□ -0.93
NPC1-206ENST00000587223 CABP2Q9NPB3 220 aa9.22□□□□□ -0.93
NPC1-206ENST00000587223 CCDC61Q9Y6R9 512 aa9.22□□□□□ -0.93
NPC1-206ENST00000587223 SLC24A1O60721 1099 aa9.21□□□□□ -0.94
NPC1-206ENST00000587223 NGDNQ8NEJ9 315 aaKnown RBP9.21□□□□□ -0.94
NPC1-206ENST00000587223 NPHP3Q7Z494 1330 aa9.21□□□□□ -0.94
NPC1-206ENST00000587223 ANKARQ7Z5J8 1434 aa9.21□□□□□ -0.94
NPC1-206ENST00000587223 FMN2Q9NZ56 1722 aa9.2□□□□□ -0.94
NPC1-206ENST00000587223 XPCQ01831 940 aaPredicted RBP9.2□□□□□ -0.94
NPC1-206ENST00000587223 KRT28Q7Z3Y7 464 aa9.2□□□□□ -0.94
NPC1-206ENST00000587223 PRR36Q9H6K5 1346 aa9.2□□□□□ -0.94
NPC1-206ENST00000587223 ADGRB2O60241 1585 aa9.2□□□□□ -0.94
NPC1-206ENST00000587223 PHLPP1O60346 1717 aa9.19□□□□□ -0.94
NPC1-206ENST00000587223 SLC4A2P04920 1241 aa9.19□□□□□ -0.94
NPC1-206ENST00000587223 SOS2Q07890 1332 aaPredicted RBP9.19□□□□□ -0.94
NPC1-206ENST00000587223 USP47Q96K76 1375 aa9.19□□□□□ -0.94
NPC1-206ENST00000587223 RGPD8O14715 1765 aaPredicted RBP9.19□□□□□ -0.94
NPC1-206ENST00000587223 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
NPC1-206ENST00000587223 TMF1P82094 1093 aa9.18□□□□□ -0.94
NPC1-206ENST00000587223 QRICH2Q9H0J4 1663 aa9.18□□□□□ -0.94
NPC1-206ENST00000587223 TULP4Q9NRJ4 1543 aa9.18□□□□□ -0.94
NPC1-206ENST00000587223 CABP1Q9NZU7 370 aa9.18□□□□□ -0.94
NPC1-206ENST00000587223 JCADQ9P266 1359 aa9.18□□□□□ -0.94
NPC1-206ENST00000587223 AHDC1Q5TGY3 1603 aaPredicted RBP9.17□□□□□ -0.94
NPC1-206ENST00000587223 SBNO2Q9Y2G9 1366 aa9.17□□□□□ -0.94
NPC1-206ENST00000587223 PLEKHG3A1L390 1219 aa9.17□□□□□ -0.94
NPC1-206ENST00000587223 LMOD2Q6P5Q4 547 aa9.17□□□□□ -0.94
NPC1-206ENST00000587223 TMC1Q8TDI8 760 aa9.17□□□□□ -0.94
NPC1-206ENST00000587223 TESK2Q96S53 571 aa9.17□□□□□ -0.94
NPC1-206ENST00000587223 ACEP12821 1306 aa9.16□□□□□ -0.94
NPC1-206ENST00000587223 NUTM2BA6NNL0 878 aaPredicted RBP9.16□□□□□ -0.94
NPC1-206ENST00000587223 NUTM2EB1AL46 878 aaPredicted RBP9.16□□□□□ -0.94
NPC1-206ENST00000587223 PAK3O75914 559 aaPredicted RBP9.16□□□□□ -0.94
NPC1-206ENST00000587223 NUTM2AQ8IVF1 878 aaPredicted RBP9.16□□□□□ -0.94
NPC1-206ENST00000587223 PUS7Q96PZ0 661 aaKnown RBP9.16□□□□□ -0.94
NPC1-206ENST00000587223 USP32Q8NFA0 1604 aa9.16□□□□□ -0.94
NPC1-206ENST00000587223 ATP7BP35670 1465 aa9.15□□□□□ -0.94
NPC1-206ENST00000587223 PPIP5K1Q6PFW1 1433 aa9.15□□□□□ -0.94
NPC1-206ENST00000587223 ATAD2Q6PL18 1390 aa9.15□□□□□ -0.94
NPC1-206ENST00000587223 HSPA5P11021 654 aaKnown RBP9.15□□□□□ -0.94
NPC1-206ENST00000587223 CDCA8Q53HL2 280 aa9.15□□□□□ -0.94
NPC1-206ENST00000587223 ZNF692Q9BU19 519 aaPredicted RBP9.15□□□□□ -0.94
NPC1-206ENST00000587223 KIF1AQ12756 1690 aa9.15□□□□□ -0.94
NPC1-206ENST00000587223 COL16A1Q07092 1604 aaPredicted RBP9.15□□□□□ -0.94
NPC1-206ENST00000587223 NHSL1Q5SYE7 1610 aa9.15□□□□□ -0.94
NPC1-206ENST00000587223 SPATA31A6Q5VVP1 1343 aa9.14□□□□□ -0.95
NPC1-206ENST00000587223 SPATA31A3Q5VYP0 1347 aa9.14□□□□□ -0.95
NPC1-206ENST00000587223 PLEKHG5O94827 1062 aa9.14□□□□□ -0.95
NPC1-206ENST00000587223 MEX3CQ5U5Q3 659 aaKnown RBP9.14□□□□□ -0.95
NPC1-206ENST00000587223 SBNO1A3KN83 1393 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms