RNA–Protein interactions for RNA: ENST00000587215.1

PKN1-209, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 363 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-209ENST00000587215 TECPR2O15040 1411 aa24.5■■□□□ 1.51
PKN1-209ENST00000587215 ZNF772Q68DY9 489 aaPredicted RBP24.49■■□□□ 1.51
PKN1-209ENST00000587215 SOS2Q07890 1332 aaPredicted RBP24.49■■□□□ 1.51
PKN1-209ENST00000587215 PNPLA6Q8IY17 1366 aa24.48■■□□□ 1.51
PKN1-209ENST00000587215 PLEKHH1Q9ULM0 1364 aa24.47■■□□□ 1.51
PKN1-209ENST00000587215 HRCP23327 699 aa24.47■■□□□ 1.51
PKN1-209ENST00000587215 CFAP70Q5T0N1 1121 aa24.47■■□□□ 1.51
PKN1-209ENST00000587215 NRXN1Q9ULB1 1477 aa24.45■■□□□ 1.51
PKN1-209ENST00000587215 YTHDC2Q9H6S0 1430 aaKnown RBP24.45■■□□□ 1.51
PKN1-209ENST00000587215 ESCO1Q5FWF5 840 aa24.45■■□□□ 1.5
PKN1-209ENST00000587215 SIRT1Q96EB6 747 aa24.45■■□□□ 1.5
PKN1-209ENST00000587215 LAMC1P11047 1609 aa24.45■■□□□ 1.5
PKN1-209ENST00000587215 NUTM2FA1L443 756 aa24.42■■□□□ 1.5
PKN1-209ENST00000587215 CDC42BPGQ6DT37 1551 aa24.42■■□□□ 1.5
PKN1-209ENST00000587215 AFF2P51816 1311 aa24.41■■□□□ 1.5
PKN1-209ENST00000587215 MYOM2P54296 1465 aa24.41■■□□□ 1.5
PKN1-209ENST00000587215 C8orf37Q96NL8 207 aa24.39■■□□□ 1.49
PKN1-209ENST00000587215 DHX57Q6P158 1386 aaKnown RBP24.39■■□□□ 1.49
PKN1-209ENST00000587215 KNDC1Q76NI1 1749 aa24.38■■□□□ 1.49
PKN1-209ENST00000587215 FOXO3O43524 673 aa24.38■■□□□ 1.49
PKN1-209ENST00000587215 RXRBP28702 533 aa24.38■■□□□ 1.49
PKN1-209ENST00000587215 NPHP3Q7Z494 1330 aa24.37■■□□□ 1.49
PKN1-209ENST00000587215 ADAMTS2O95450 1211 aa24.37■■□□□ 1.49
PKN1-209ENST00000587215 KDM2AQ9Y2K7 1162 aa24.35■■□□□ 1.49
PKN1-209ENST00000587215 XPCQ01831 940 aaPredicted RBP24.34■■□□□ 1.49
PKN1-209ENST00000587215 DCAF11Q8TEB1 546 aa24.33■■□□□ 1.49
PKN1-209ENST00000587215 NGLY1Q96IV0 654 aa24.33■■□□□ 1.49
PKN1-209ENST00000587215 PRAM1Q96QH2 718 aa24.33■■□□□ 1.49
PKN1-209ENST00000587215 QTRT2Q9H974 415 aaKnown RBP24.33■■□□□ 1.49
PKN1-209ENST00000587215 PXDNQ92626 1479 aa24.32■■□□□ 1.48
PKN1-209ENST00000587215 SAFB2Q14151 953 aaKnown RBP eCLIP24.31■■□□□ 1.48
PKN1-209ENST00000587215 STAC3Q96MF2 364 aa24.29■■□□□ 1.48
PKN1-209ENST00000587215 FMN2Q9NZ56 1722 aa24.29■■□□□ 1.48
PKN1-209ENST00000587215 POGKQ9P215 609 aa24.28■■□□□ 1.48
PKN1-209ENST00000587215 RBM6P78332 1123 aaKnown RBP24.27■■□□□ 1.48
PKN1-209ENST00000587215 FNBP4Q8N3X1 1017 aaPredicted RBP24.27■■□□□ 1.48
PKN1-209ENST00000587215 TRAK1Q9UPV9 953 aa24.27■■□□□ 1.48
PKN1-209ENST00000587215 ADGRB1O14514 1584 aa24.27■■□□□ 1.48
PKN1-209ENST00000587215 COL22A1Q8NFW1 1626 aaPredicted RBP24.27■■□□□ 1.48
PKN1-209ENST00000587215 KRT28Q7Z3Y7 464 aa24.26■■□□□ 1.47
PKN1-209ENST00000587215 CDK12Q9NYV4 1490 aaPredicted RBP24.26■■□□□ 1.47
PKN1-209ENST00000587215 DLC1Q96QB1 1528 aa24.25■■□□□ 1.47
PKN1-209ENST00000587215 UPF1Q92900 1129 aaKnown RBP eCLIP24.25■■□□□ 1.47
PKN1-209ENST00000587215 USP21Q9UK80 565 aa24.25■■□□□ 1.47
PKN1-209ENST00000587215 PHF8Q9UPP1 1060 aa24.25■■□□□ 1.47
PKN1-209ENST00000587215 SPATA31A3Q5VYP0 1347 aa24.24■■□□□ 1.47
PKN1-209ENST00000587215 HIRIP3Q9BW71 556 aaPredicted RBP24.2■■□□□ 1.46
PKN1-209ENST00000587215 RGPD8O14715 1765 aaPredicted RBP24.2■■□□□ 1.46
PKN1-209ENST00000587215 TRPC5Q9UL62 973 aaPredicted RBP24.19■■□□□ 1.46
PKN1-209ENST00000587215 KIF1AQ12756 1690 aa24.18■■□□□ 1.46
PKN1-209ENST00000587215 PSME1Q06323 249 aa24.18■■□□□ 1.46
PKN1-209ENST00000587215 RGS12O14924 1447 aa24.18■■□□□ 1.46
PKN1-209ENST00000587215 PMFBP1Q8TBY8 1022 aa24.17■■□□□ 1.46
PKN1-209ENST00000587215 MINK1Q8N4C8 1332 aaPredicted RBP24.16■■□□□ 1.46
PKN1-209ENST00000587215 BCL9LQ86UU0 1499 aa24.15■■□□□ 1.46
PKN1-209ENST00000587215 USP32Q8NFA0 1604 aa24.14■■□□□ 1.46
PKN1-209ENST00000587215 WASLO00401 505 aaPredicted RBP24.14■■□□□ 1.45
PKN1-209ENST00000587215 ATRNO75882 1429 aa24.14■■□□□ 1.45
PKN1-209ENST00000587215 ANKARQ7Z5J8 1434 aa24.14■■□□□ 1.45
PKN1-209ENST00000587215 PRR36Q9H6K5 1346 aa24.13■■□□□ 1.45
PKN1-209ENST00000587215 ADGRB2O60241 1585 aa24.13■■□□□ 1.45
PKN1-209ENST00000587215 CABLES1Q8TDN4 633 aa24.12■■□□□ 1.45
PKN1-209ENST00000587215 SBNO1A3KN83 1393 aa24.12■■□□□ 1.45
PKN1-209ENST00000587215 TNS3Q68CZ2 1445 aa24.11■■□□□ 1.45
PKN1-209ENST00000587215 MARF1Q9Y4F3 1742 aaKnown RBP24.1■■□□□ 1.45
PKN1-209ENST00000587215 LMOD2Q6P5Q4 547 aa24.09■■□□□ 1.45
PKN1-209ENST00000587215 PLEKHG5O94827 1062 aa24.07■■□□□ 1.44
PKN1-209ENST00000587215 NBPF1Q3BBV0 1214 aa24.07■■□□□ 1.44
PKN1-209ENST00000587215 UNC5CLQ8IV45 518 aa24.07■■□□□ 1.44
PKN1-209ENST00000587215 GJD4Q96KN9 370 aaPredicted RBP24.07■■□□□ 1.44
PKN1-209ENST00000587215 SLIT2O94813 1529 aa24.06■■□□□ 1.44
PKN1-209ENST00000587215 EIF3AQ14152 1382 aaKnown RBP24.05■■□□□ 1.44
PKN1-209ENST00000587215 TULP4Q9NRJ4 1543 aa24.05■■□□□ 1.44
PKN1-209ENST00000587215 HAP1P54257 671 aaPredicted RBP24.04■■□□□ 1.44
PKN1-209ENST00000587215 ARHGEF10O15013 1369 aa24.03■■□□□ 1.44
PKN1-209ENST00000587215 NUDT16Q96DE0 195 aaKnown RBP24.03■■□□□ 1.44
PKN1-209ENST00000587215 ARHGEF28Q8N1W1 1705 aaKnown RBP24.03■■□□□ 1.44
PKN1-209ENST00000587215 NGDNQ8NEJ9 315 aaKnown RBP24.02■■□□□ 1.44
PKN1-209ENST00000587215 CDK19Q9BWU1 502 aa24.02■■□□□ 1.44
PKN1-209ENST00000587215 GPRASP1Q5JY77 1395 aa24.02■■□□□ 1.44
PKN1-209ENST00000587215 FAM83GA6ND36 823 aa24■■□□□ 1.43
PKN1-209ENST00000587215 L3MBTL2Q969R5 705 aa24■■□□□ 1.43
PKN1-209ENST00000587215 SIN3AQ96ST3 1273 aa24■■□□□ 1.43
PKN1-209ENST00000587215 KIAA1210Q9ULL0 1709 aa23.99■■□□□ 1.43
PKN1-209ENST00000587215 TRPM3Q9HCF6 1732 aaPredicted RBP23.98■■□□□ 1.43
PKN1-209ENST00000587215 ATAD2Q6PL18 1390 aa23.98■■□□□ 1.43
PKN1-209ENST00000587215 ATP7BP35670 1465 aa23.97■■□□□ 1.43
PKN1-209ENST00000587215 RALGAPBQ86X10 1494 aa23.97■■□□□ 1.43
PKN1-209ENST00000587215 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.97■■□□□ 1.43
PKN1-209ENST00000587215 VPS72Q15906 364 aa23.96■■□□□ 1.43
PKN1-209ENST00000587215 PAK3O75914 559 aaPredicted RBP23.95■■□□□ 1.42
PKN1-209ENST00000587215 GLI3P10071 1580 aa23.95■■□□□ 1.42
PKN1-209ENST00000587215 CCDC61Q9Y6R9 512 aa23.94■■□□□ 1.42
PKN1-209ENST00000587215 ALS2Q96Q42 1657 aa23.94■■□□□ 1.42
PKN1-209ENST00000587215 ABCA3Q99758 1704 aa23.93■■□□□ 1.42
PKN1-209ENST00000587215 PLEKHG3A1L390 1219 aa23.92■■□□□ 1.42
PKN1-209ENST00000587215 ACEP12821 1306 aa23.91■■□□□ 1.42
PKN1-209ENST00000587215 ONECUT3O60422 494 aaPredicted RBP23.91■■□□□ 1.42
PKN1-209ENST00000587215 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
PKN1-209ENST00000587215 NBPF8Q3BBV2 869 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms