RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 YTHDC2Q9H6S0 1430 aaKnown RBP27.88■■■□□ 2.05
CLPTM1-206ENST00000586975 PLEKHH1Q9ULM0 1364 aa27.87■■■□□ 2.05
CLPTM1-206ENST00000586975 NUTM2FA1L443 756 aa27.87■■■□□ 2.05
CLPTM1-206ENST00000586975 MYOM2P54296 1465 aa27.87■■■□□ 2.05
CLPTM1-206ENST00000586975 TECPR2O15040 1411 aa27.86■■■□□ 2.05
CLPTM1-206ENST00000586975 DCAF11Q8TEB1 546 aa27.86■■■□□ 2.05
CLPTM1-206ENST00000586975 ESCO1Q5FWF5 840 aa27.85■■■□□ 2.05
CLPTM1-206ENST00000586975 LRP6O75581 1613 aa27.85■■■□□ 2.05
CLPTM1-206ENST00000586975 DHX57Q6P158 1386 aaKnown RBP27.85■■■□□ 2.05
CLPTM1-206ENST00000586975 NHSL1Q5SYE7 1610 aa27.84■■■□□ 2.05
CLPTM1-206ENST00000586975 NRXN1Q9ULB1 1477 aa27.83■■■□□ 2.05
CLPTM1-206ENST00000586975 SHPRHQ149N8 1683 aa27.81■■■□□ 2.04
CLPTM1-206ENST00000586975 SAFB2Q14151 953 aaKnown RBP eCLIP27.8■■■□□ 2.04
CLPTM1-206ENST00000586975 CDC42BPGQ6DT37 1551 aa27.78■■■□□ 2.04
CLPTM1-206ENST00000586975 SIRT1Q96EB6 747 aa27.77■■■□□ 2.04
CLPTM1-206ENST00000586975 PRAM1Q96QH2 718 aa27.77■■■□□ 2.04
CLPTM1-206ENST00000586975 POGKQ9P215 609 aa27.77■■■□□ 2.04
CLPTM1-206ENST00000586975 KNDC1Q76NI1 1749 aa27.77■■■□□ 2.04
CLPTM1-206ENST00000586975 PNPLA6Q8IY17 1366 aa27.76■■■□□ 2.03
CLPTM1-206ENST00000586975 LAMC1P11047 1609 aa27.75■■■□□ 2.03
CLPTM1-206ENST00000586975 SOS2Q07890 1332 aaPredicted RBP27.75■■■□□ 2.03
CLPTM1-206ENST00000586975 FOXO3O43524 673 aa27.74■■■□□ 2.03
CLPTM1-206ENST00000586975 XPCQ01831 940 aaPredicted RBP27.74■■■□□ 2.03
CLPTM1-206ENST00000586975 ZNF772Q68DY9 489 aaPredicted RBP27.74■■■□□ 2.03
CLPTM1-206ENST00000586975 TRAK1Q9UPV9 953 aa27.74■■■□□ 2.03
CLPTM1-206ENST00000586975 NPHP3Q7Z494 1330 aa27.73■■■□□ 2.03
CLPTM1-206ENST00000586975 ADAMTS2O95450 1211 aa27.71■■■□□ 2.03
CLPTM1-206ENST00000586975 STAC3Q96MF2 364 aa27.71■■■□□ 2.03
CLPTM1-206ENST00000586975 C8orf37Q96NL8 207 aa27.7■■■□□ 2.02
CLPTM1-206ENST00000586975 AFF2P51816 1311 aa27.67■■■□□ 2.02
CLPTM1-206ENST00000586975 ADGRB1O14514 1584 aa27.65■■■□□ 2.02
CLPTM1-206ENST00000586975 HIRIP3Q9BW71 556 aaPredicted RBP27.65■■■□□ 2.02
CLPTM1-206ENST00000586975 NGLY1Q96IV0 654 aa27.63■■■□□ 2.01
CLPTM1-206ENST00000586975 FMN2Q9NZ56 1722 aa27.63■■■□□ 2.01
CLPTM1-206ENST00000586975 MINK1Q8N4C8 1332 aaPredicted RBP27.63■■■□□ 2.01
CLPTM1-206ENST00000586975 DLC1Q96QB1 1528 aa27.62■■■□□ 2.01
CLPTM1-206ENST00000586975 PHF8Q9UPP1 1060 aa27.62■■■□□ 2.01
CLPTM1-206ENST00000586975 PXDNQ92626 1479 aa27.61■■■□□ 2.01
CLPTM1-206ENST00000586975 RXRBP28702 533 aa27.6■■■□□ 2.01
CLPTM1-206ENST00000586975 KRT28Q7Z3Y7 464 aa27.59■■■□□ 2.01
CLPTM1-206ENST00000586975 PMFBP1Q8TBY8 1022 aa27.56■■■□□ 2
CLPTM1-206ENST00000586975 QTRT2Q9H974 415 aaKnown RBP27.56■■■□□ 2
CLPTM1-206ENST00000586975 PLEKHG5O94827 1062 aa27.54■■■□□ 2
CLPTM1-206ENST00000586975 PSME1Q06323 249 aa27.54■■■□□ 2
CLPTM1-206ENST00000586975 KIF1AQ12756 1690 aa27.53■■■□□ 2
CLPTM1-206ENST00000586975 SIN3AQ96ST3 1273 aa27.53■■■□□ 2
CLPTM1-206ENST00000586975 SPATA31A3Q5VYP0 1347 aa27.52■■■□□ 2
CLPTM1-206ENST00000586975 NEUROD1Q13562 356 aa27.52■■■□□ 2
CLPTM1-206ENST00000586975 LMOD2Q6P5Q4 547 aa27.52■■■□□ 2
CLPTM1-206ENST00000586975 WASLO00401 505 aaPredicted RBP27.51■■□□□ 1.99
CLPTM1-206ENST00000586975 USP21Q9UK80 565 aa27.51■■□□□ 1.99
CLPTM1-206ENST00000586975 NBPF1Q3BBV0 1214 aa27.5■■□□□ 1.99
CLPTM1-206ENST00000586975 RGPD8O14715 1765 aaPredicted RBP27.5■■□□□ 1.99
CLPTM1-206ENST00000586975 COL22A1Q8NFW1 1626 aaPredicted RBP27.49■■□□□ 1.99
CLPTM1-206ENST00000586975 ANKARQ7Z5J8 1434 aa27.49■■□□□ 1.99
CLPTM1-206ENST00000586975 HAP1P54257 671 aaPredicted RBP27.48■■□□□ 1.99
CLPTM1-206ENST00000586975 L3MBTL2Q969R5 705 aa27.48■■□□□ 1.99
CLPTM1-206ENST00000586975 ADGRB2O60241 1585 aa27.48■■□□□ 1.99
CLPTM1-206ENST00000586975 EIF3AQ14152 1382 aaKnown RBP27.48■■□□□ 1.99
CLPTM1-206ENST00000586975 RBM6P78332 1123 aaKnown RBP27.47■■□□□ 1.99
CLPTM1-206ENST00000586975 PRR36Q9H6K5 1346 aa27.46■■□□□ 1.99
CLPTM1-206ENST00000586975 TNS3Q68CZ2 1445 aa27.44■■□□□ 1.98
CLPTM1-206ENST00000586975 FNBP4Q8N3X1 1017 aaPredicted RBP27.44■■□□□ 1.98
CLPTM1-206ENST00000586975 USP32Q8NFA0 1604 aa27.44■■□□□ 1.98
CLPTM1-206ENST00000586975 CABLES1Q8TDN4 633 aa27.43■■□□□ 1.98
CLPTM1-206ENST00000586975 NGDNQ8NEJ9 315 aaKnown RBP27.42■■□□□ 1.98
CLPTM1-206ENST00000586975 TRPC5Q9UL62 973 aaPredicted RBP27.42■■□□□ 1.98
CLPTM1-206ENST00000586975 TULP4Q9NRJ4 1543 aa27.41■■□□□ 1.98
CLPTM1-206ENST00000586975 ARHGEF28Q8N1W1 1705 aaKnown RBP27.41■■□□□ 1.98
CLPTM1-206ENST00000586975 SBNO1A3KN83 1393 aa27.41■■□□□ 1.98
CLPTM1-206ENST00000586975 CDK19Q9BWU1 502 aa27.41■■□□□ 1.98
CLPTM1-206ENST00000586975 GPRASP1Q5JY77 1395 aa27.4■■□□□ 1.98
CLPTM1-206ENST00000586975 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
CLPTM1-206ENST00000586975 KIAA1210Q9ULL0 1709 aa27.38■■□□□ 1.97
CLPTM1-206ENST00000586975 CDK12Q9NYV4 1490 aaPredicted RBP27.38■■□□□ 1.97
CLPTM1-206ENST00000586975 ARHGEF10O15013 1369 aa27.37■■□□□ 1.97
CLPTM1-206ENST00000586975 PAK3O75914 559 aaPredicted RBP27.37■■□□□ 1.97
CLPTM1-206ENST00000586975 RGS12O14924 1447 aa27.35■■□□□ 1.97
CLPTM1-206ENST00000586975 TRIM26Q12899 539 aaPredicted RBP27.35■■□□□ 1.97
CLPTM1-206ENST00000586975 CENPJQ9HC77 1338 aaPredicted RBP27.34■■□□□ 1.97
CLPTM1-206ENST00000586975 UPF1Q92900 1129 aaKnown RBP eCLIP27.33■■□□□ 1.97
CLPTM1-206ENST00000586975 ATRNO75882 1429 aa27.33■■□□□ 1.96
CLPTM1-206ENST00000586975 BCL9LQ86UU0 1499 aa27.32■■□□□ 1.96
CLPTM1-206ENST00000586975 ATP7BP35670 1465 aa27.32■■□□□ 1.96
CLPTM1-206ENST00000586975 SRPK2P78362 688 aaKnown RBP27.31■■□□□ 1.96
CLPTM1-206ENST00000586975 UNC5CLQ8IV45 518 aa27.3■■□□□ 1.96
CLPTM1-206ENST00000586975 MARF1Q9Y4F3 1742 aaKnown RBP27.3■■□□□ 1.96
CLPTM1-206ENST00000586975 CCDC61Q9Y6R9 512 aa27.29■■□□□ 1.96
CLPTM1-206ENST00000586975 GJD4Q96KN9 370 aaPredicted RBP27.28■■□□□ 1.96
CLPTM1-206ENST00000586975 ROCK2O75116 1388 aaKnown RBP27.27■■□□□ 1.96
CLPTM1-206ENST00000586975 CABP2Q9NPB3 220 aa27.27■■□□□ 1.96
CLPTM1-206ENST00000586975 ACEP12821 1306 aa27.25■■□□□ 1.95
CLPTM1-206ENST00000586975 SLIT2O94813 1529 aa27.25■■□□□ 1.95
CLPTM1-206ENST00000586975 TRPM3Q9HCF6 1732 aaPredicted RBP27.24■■□□□ 1.95
CLPTM1-206ENST00000586975 CCDC9Q9Y3X0 531 aaKnown RBP27.24■■□□□ 1.95
CLPTM1-206ENST00000586975 FAM83GA6ND36 823 aa27.23■■□□□ 1.95
CLPTM1-206ENST00000586975 NBPF8Q3BBV2 869 aa27.23■■□□□ 1.95
CLPTM1-206ENST00000586975 ITSN1Q15811 1721 aa27.23■■□□□ 1.95
CLPTM1-206ENST00000586975 NUTM2GQ5VZR2 741 aa27.22■■□□□ 1.95
CLPTM1-206ENST00000586975 PLEKHG3A1L390 1219 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms