RNA–Protein interactions for RNA: ENST00000586708.1

SPC24-204, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC24, Length 378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-204ENST00000586708 NEUROD1Q13562 356 aa19.79■□□□□ 0.76
SPC24-204ENST00000586708 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
SPC24-204ENST00000586708 COL16A1Q07092 1604 aaPredicted RBP19.77■□□□□ 0.76
SPC24-204ENST00000586708 PHLPP1O60346 1717 aa19.77■□□□□ 0.76
SPC24-204ENST00000586708 ARHGEF28Q8N1W1 1705 aaKnown RBP19.77■□□□□ 0.76
SPC24-204ENST00000586708 NHSL1Q5SYE7 1610 aa19.76■□□□□ 0.75
SPC24-204ENST00000586708 ADGRB2O60241 1585 aa19.76■□□□□ 0.75
SPC24-204ENST00000586708 PRAM1Q96QH2 718 aa19.76■□□□□ 0.75
SPC24-204ENST00000586708 FMN2Q9NZ56 1722 aa19.76■□□□□ 0.75
SPC24-204ENST00000586708 NBPF1Q3BBV0 1214 aa19.75■□□□□ 0.75
SPC24-204ENST00000586708 TRPM1Q7Z4N2 1603 aa19.75■□□□□ 0.75
SPC24-204ENST00000586708 TRAK1Q9UPV9 953 aa19.74■□□□□ 0.75
SPC24-204ENST00000586708 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
SPC24-204ENST00000586708 POGKQ9P215 609 aa19.7■□□□□ 0.74
SPC24-204ENST00000586708 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
SPC24-204ENST00000586708 NBPF8Q3BBV2 869 aa19.69■□□□□ 0.74
SPC24-204ENST00000586708 ORAI2Q96SN7 254 aa19.69■□□□□ 0.74
SPC24-204ENST00000586708 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
SPC24-204ENST00000586708 MED1Q15648 1581 aaPredicted RBP19.68■□□□□ 0.74
SPC24-204ENST00000586708 GPRASP1Q5JY77 1395 aa19.68■□□□□ 0.74
SPC24-204ENST00000586708 USP32Q8NFA0 1604 aa19.66■□□□□ 0.74
SPC24-204ENST00000586708 RGPD8O14715 1765 aaPredicted RBP19.66■□□□□ 0.74
SPC24-204ENST00000586708 JCADQ9P266 1359 aa19.66■□□□□ 0.74
SPC24-204ENST00000586708 SHPRHQ149N8 1683 aa19.65■□□□□ 0.74
SPC24-204ENST00000586708 ANKARQ7Z5J8 1434 aa19.65■□□□□ 0.74
SPC24-204ENST00000586708 SOS2Q07890 1332 aaPredicted RBP19.64■□□□□ 0.73
SPC24-204ENST00000586708 KIF1AQ12756 1690 aa19.63■□□□□ 0.73
SPC24-204ENST00000586708 RALGAPBQ86X10 1494 aa19.63■□□□□ 0.73
SPC24-204ENST00000586708 MINK1Q8N4C8 1332 aaPredicted RBP19.63■□□□□ 0.73
SPC24-204ENST00000586708 DDX17Q92841 729 aaKnown RBP19.63■□□□□ 0.73
SPC24-204ENST00000586708 TULP4Q9NRJ4 1543 aa19.62■□□□□ 0.73
SPC24-204ENST00000586708 ROCK2O75116 1388 aaKnown RBP19.62■□□□□ 0.73
SPC24-204ENST00000586708 WASLO00401 505 aaPredicted RBP19.62■□□□□ 0.73
SPC24-204ENST00000586708 ESCO1Q5FWF5 840 aa19.62■□□□□ 0.73
SPC24-204ENST00000586708 PXDNQ92626 1479 aa19.61■□□□□ 0.73
SPC24-204ENST00000586708 NUTM2FA1L443 756 aa19.61■□□□□ 0.73
SPC24-204ENST00000586708 HIRIP3Q9BW71 556 aaPredicted RBP19.61■□□□□ 0.73
SPC24-204ENST00000586708 EIF3AQ14152 1382 aaKnown RBP19.6■□□□□ 0.73
SPC24-204ENST00000586708 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
SPC24-204ENST00000586708 PRR36Q9H6K5 1346 aa19.59■□□□□ 0.73
SPC24-204ENST00000586708 CENPJQ9HC77 1338 aaPredicted RBP19.59■□□□□ 0.73
SPC24-204ENST00000586708 LRRC59Q96AG4 307 aaKnown RBP19.59■□□□□ 0.73
SPC24-204ENST00000586708 QRICH2Q9H0J4 1663 aa19.59■□□□□ 0.73
SPC24-204ENST00000586708 DISP3Q9P2K9 1392 aa19.58■□□□□ 0.73
SPC24-204ENST00000586708 TIMELESSQ9UNS1 1208 aa19.58■□□□□ 0.72
SPC24-204ENST00000586708 ATP7BP35670 1465 aa19.58■□□□□ 0.72
SPC24-204ENST00000586708 SPATA31A6Q5VVP1 1343 aa19.57■□□□□ 0.72
SPC24-204ENST00000586708 PNPLA6Q8IY17 1366 aa19.57■□□□□ 0.72
SPC24-204ENST00000586708 FOXO3O43524 673 aa19.56■□□□□ 0.72
SPC24-204ENST00000586708 PHF8Q9UPP1 1060 aa19.56■□□□□ 0.72
SPC24-204ENST00000586708 LRP6O75581 1613 aa19.55■□□□□ 0.72
SPC24-204ENST00000586708 TOPAZ1Q8N9V7 1692 aa19.55■□□□□ 0.72
SPC24-204ENST00000586708 COL22A1Q8NFW1 1626 aaPredicted RBP19.54■□□□□ 0.72
SPC24-204ENST00000586708 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
SPC24-204ENST00000586708 CDK19Q9BWU1 502 aa19.53■□□□□ 0.72
SPC24-204ENST00000586708 SBNO2Q9Y2G9 1366 aa19.52■□□□□ 0.72
SPC24-204ENST00000586708 NUDT16Q96DE0 195 aaKnown RBP19.51■□□□□ 0.71
SPC24-204ENST00000586708 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
SPC24-204ENST00000586708 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
SPC24-204ENST00000586708 TRPM3Q9HCF6 1732 aaPredicted RBP19.49■□□□□ 0.71
SPC24-204ENST00000586708 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
SPC24-204ENST00000586708 SPATA31A3Q5VYP0 1347 aa19.49■□□□□ 0.71
SPC24-204ENST00000586708 SBNO1A3KN83 1393 aa19.48■□□□□ 0.71
SPC24-204ENST00000586708 KRT28Q7Z3Y7 464 aa19.48■□□□□ 0.71
SPC24-204ENST00000586708 PMFBP1Q8TBY8 1022 aa19.48■□□□□ 0.71
SPC24-204ENST00000586708 RGS17Q9UGC6 210 aaPredicted RBP19.48■□□□□ 0.71
SPC24-204ENST00000586708 CCDC61Q9Y6R9 512 aa19.47■□□□□ 0.71
SPC24-204ENST00000586708 POLR3AO14802 1390 aaPredicted RBP19.46■□□□□ 0.71
SPC24-204ENST00000586708 TNS3Q68CZ2 1445 aa19.46■□□□□ 0.71
SPC24-204ENST00000586708 PLEKHG3A1L390 1219 aa19.46■□□□□ 0.71
SPC24-204ENST00000586708 PSME1Q06323 249 aa19.45■□□□□ 0.7
SPC24-204ENST00000586708 ALS2Q96Q42 1657 aa19.44■□□□□ 0.7
SPC24-204ENST00000586708 CABP2Q9NPB3 220 aa19.44■□□□□ 0.7
SPC24-204ENST00000586708 EVC2Q86UK5 1308 aa19.44■□□□□ 0.7
SPC24-204ENST00000586708 ILDR2Q71H61 639 aa19.43■□□□□ 0.7
SPC24-204ENST00000586708 PHF23Q9BUL5 403 aaPredicted RBP19.43■□□□□ 0.7
SPC24-204ENST00000586708 SRPK2P78362 688 aaKnown RBP19.42■□□□□ 0.7
SPC24-204ENST00000586708 NUTM2BA6NNL0 878 aaPredicted RBP19.41■□□□□ 0.7
SPC24-204ENST00000586708 NUTM2EB1AL46 878 aaPredicted RBP19.41■□□□□ 0.7
SPC24-204ENST00000586708 NUTM2AQ8IVF1 878 aaPredicted RBP19.41■□□□□ 0.7
SPC24-204ENST00000586708 NGDNQ8NEJ9 315 aaKnown RBP19.41■□□□□ 0.7
SPC24-204ENST00000586708 TESK2Q96S53 571 aa19.41■□□□□ 0.7
SPC24-204ENST00000586708 PPIP5K1Q6PFW1 1433 aa19.41■□□□□ 0.7
SPC24-204ENST00000586708 ACEP12821 1306 aa19.4■□□□□ 0.7
SPC24-204ENST00000586708 ARHGEF10O15013 1369 aa19.4■□□□□ 0.7
SPC24-204ENST00000586708 ABCA3Q99758 1704 aa19.39■□□□□ 0.69
SPC24-204ENST00000586708 MARF1Q9Y4F3 1742 aaKnown RBP19.39■□□□□ 0.69
SPC24-204ENST00000586708 CRYBG1Q9Y4K1 1723 aa19.37■□□□□ 0.69
SPC24-204ENST00000586708 ATAD2Q6PL18 1390 aa19.37■□□□□ 0.69
SPC24-204ENST00000586708 USP47Q96K76 1375 aa19.37■□□□□ 0.69
SPC24-204ENST00000586708 ST20-MTHFSA0A0A6YYL1 179 aa19.37■□□□□ 0.69
SPC24-204ENST00000586708 MEX3CQ5U5Q3 659 aaKnown RBP19.36■□□□□ 0.69
SPC24-204ENST00000586708 POTEAQ6S8J7 498 aa19.36■□□□□ 0.69
SPC24-204ENST00000586708 PUS7Q96PZ0 661 aaKnown RBP19.36■□□□□ 0.69
SPC24-204ENST00000586708 CABP1Q9NZU7 370 aa19.35■□□□□ 0.69
SPC24-204ENST00000586708 SSH2Q76I76 1423 aa19.34■□□□□ 0.69
SPC24-204ENST00000586708 BRD4O60885 1362 aaPredicted RBP19.34■□□□□ 0.69
SPC24-204ENST00000586708 AKAP12Q02952 1782 aa19.34■□□□□ 0.69
SPC24-204ENST00000586708 AFF2P51816 1311 aa19.33■□□□□ 0.69
SPC24-204ENST00000586708 ADAMTS2O95450 1211 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms