RNA–Protein interactions for RNA: ENST00000586552.5

LINC00479-203, long intergenic non-protein coding RNA 479, humanhuman

TSL 1 (best)

Gene LINC00479, Length 292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479-203ENST00000586552 TRPC5Q9UL62 973 aaPredicted RBP12.79□□□□□ -0.36
LINC00479-203ENST00000586552 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
LINC00479-203ENST00000586552 LAMC1P11047 1609 aa12.78□□□□□ -0.36
LINC00479-203ENST00000586552 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
LINC00479-203ENST00000586552 CCDC144AA2RUR9 1427 aa12.78□□□□□ -0.36
LINC00479-203ENST00000586552 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
LINC00479-203ENST00000586552 FOXO3O43524 673 aa12.77□□□□□ -0.37
LINC00479-203ENST00000586552 XPCQ01831 940 aaPredicted RBP12.77□□□□□ -0.37
LINC00479-203ENST00000586552 ADGRF5Q8IZF2 1346 aa12.77□□□□□ -0.37
LINC00479-203ENST00000586552 ATAD2Q6PL18 1390 aa12.77□□□□□ -0.37
LINC00479-203ENST00000586552 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
LINC00479-203ENST00000586552 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
LINC00479-203ENST00000586552 LRPPRCP42704 1394 aaKnown RBP12.75□□□□□ -0.37
LINC00479-203ENST00000586552 CDC42BPGQ6DT37 1551 aa12.75□□□□□ -0.37
LINC00479-203ENST00000586552 COL22A1Q8NFW1 1626 aaPredicted RBP12.74□□□□□ -0.37
LINC00479-203ENST00000586552 TMEM132EQ6IEE7 984 aa12.74□□□□□ -0.37
LINC00479-203ENST00000586552 ATRNO75882 1429 aa12.73□□□□□ -0.37
LINC00479-203ENST00000586552 ANKRD30BQ9BXX2 1392 aa12.73□□□□□ -0.37
LINC00479-203ENST00000586552 MYOM2P54296 1465 aa12.72□□□□□ -0.37
LINC00479-203ENST00000586552 PXDNQ92626 1479 aa12.72□□□□□ -0.37
LINC00479-203ENST00000586552 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
LINC00479-203ENST00000586552 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.37
LINC00479-203ENST00000586552 TECPR2O15040 1411 aa12.71□□□□□ -0.38
LINC00479-203ENST00000586552 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
LINC00479-203ENST00000586552 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
LINC00479-203ENST00000586552 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
LINC00479-203ENST00000586552 GJD4Q96KN9 370 aaPredicted RBP12.7□□□□□ -0.38
LINC00479-203ENST00000586552 BCL9LQ86UU0 1499 aa12.7□□□□□ -0.38
LINC00479-203ENST00000586552 SPATA31E1Q6ZUB1 1445 aa12.7□□□□□ -0.38
LINC00479-203ENST00000586552 IFT172Q9UG01 1749 aa12.69□□□□□ -0.38
LINC00479-203ENST00000586552 MARF1Q9Y4F3 1742 aaKnown RBP12.69□□□□□ -0.38
LINC00479-203ENST00000586552 KRT28Q7Z3Y7 464 aa12.69□□□□□ -0.38
LINC00479-203ENST00000586552 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
LINC00479-203ENST00000586552 YTHDC2Q9H6S0 1430 aaKnown RBP12.69□□□□□ -0.38
LINC00479-203ENST00000586552 KNDC1Q76NI1 1749 aa12.68□□□□□ -0.38
LINC00479-203ENST00000586552 PIK3C2GO75747 1445 aa12.68□□□□□ -0.38
LINC00479-203ENST00000586552 SPATA31A3Q5VYP0 1347 aa12.67□□□□□ -0.38
LINC00479-203ENST00000586552 LMOD2Q6P5Q4 547 aa12.67□□□□□ -0.38
LINC00479-203ENST00000586552 CCDC125Q86Z20 511 aa12.67□□□□□ -0.38
LINC00479-203ENST00000586552 UNC5CLQ8IV45 518 aa12.67□□□□□ -0.38
LINC00479-203ENST00000586552 FMN2Q9NZ56 1722 aa12.67□□□□□ -0.38
LINC00479-203ENST00000586552 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
LINC00479-203ENST00000586552 PSME1Q06323 249 aa12.66□□□□□ -0.38
LINC00479-203ENST00000586552 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00479-203ENST00000586552 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
LINC00479-203ENST00000586552 DHX57Q6P158 1386 aaKnown RBP12.66□□□□□ -0.38
LINC00479-203ENST00000586552 CFAP70Q5T0N1 1121 aa12.65□□□□□ -0.38
LINC00479-203ENST00000586552 CCDC9Q9Y3X0 531 aaKnown RBP12.65□□□□□ -0.38
LINC00479-203ENST00000586552 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
LINC00479-203ENST00000586552 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
LINC00479-203ENST00000586552 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
LINC00479-203ENST00000586552 C14orf93Q9H972 538 aaKnown RBP12.64□□□□□ -0.39
LINC00479-203ENST00000586552 POGKQ9P215 609 aa12.64□□□□□ -0.39
LINC00479-203ENST00000586552 RALGAPBQ86X10 1494 aa12.64□□□□□ -0.39
LINC00479-203ENST00000586552 TNS3Q68CZ2 1445 aa12.63□□□□□ -0.39
LINC00479-203ENST00000586552 SLIT2O94813 1529 aa12.63□□□□□ -0.39
LINC00479-203ENST00000586552 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.63□□□□□ -0.39
LINC00479-203ENST00000586552 SF3B2Q13435 895 aaKnown RBP12.63□□□□□ -0.39
LINC00479-203ENST00000586552 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
LINC00479-203ENST00000586552 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
LINC00479-203ENST00000586552 PMFBP1Q8TBY8 1022 aa12.62□□□□□ -0.39
LINC00479-203ENST00000586552 ACIN1Q9UKV3 1341 aaKnown RBP12.62□□□□□ -0.39
LINC00479-203ENST00000586552 GLI3P10071 1580 aa12.61□□□□□ -0.39
LINC00479-203ENST00000586552 A0A0G2JS52 829 aa12.61□□□□□ -0.39
LINC00479-203ENST00000586552 MYT1Q01538 1121 aa12.61□□□□□ -0.39
LINC00479-203ENST00000586552 SEPT12Q8IYM1 358 aa12.61□□□□□ -0.39
LINC00479-203ENST00000586552 BLMP54132 1417 aaPredicted RBP12.6□□□□□ -0.39
LINC00479-203ENST00000586552 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
LINC00479-203ENST00000586552 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
LINC00479-203ENST00000586552 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
LINC00479-203ENST00000586552 VPS72Q15906 364 aa12.59□□□□□ -0.39
LINC00479-203ENST00000586552 DEFB132Q7Z7B7 95 aa12.59□□□□□ -0.39
LINC00479-203ENST00000586552 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
LINC00479-203ENST00000586552 TRAK1Q9UPV9 953 aa12.59□□□□□ -0.39
LINC00479-203ENST00000586552 BRWD3Q6RI45 1802 aa12.58□□□□□ -0.4
LINC00479-203ENST00000586552 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
LINC00479-203ENST00000586552 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
LINC00479-203ENST00000586552 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
LINC00479-203ENST00000586552 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
LINC00479-203ENST00000586552 ANKARQ7Z5J8 1434 aa12.56□□□□□ -0.4
LINC00479-203ENST00000586552 FAM83GA6ND36 823 aa12.56□□□□□ -0.4
LINC00479-203ENST00000586552 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
LINC00479-203ENST00000586552 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
LINC00479-203ENST00000586552 ABCA3Q99758 1704 aa12.55□□□□□ -0.4
LINC00479-203ENST00000586552 DCAF11Q8TEB1 546 aa12.55□□□□□ -0.4
LINC00479-203ENST00000586552 BTG4Q9NY30 223 aa12.55□□□□□ -0.4
LINC00479-203ENST00000586552 DLC1Q96QB1 1528 aa12.55□□□□□ -0.4
LINC00479-203ENST00000586552 RAB3GAP2Q9H2M9 1393 aa12.55□□□□□ -0.4
LINC00479-203ENST00000586552 ONECUT3O60422 494 aaPredicted RBP12.54□□□□□ -0.4
LINC00479-203ENST00000586552 PAK3O75914 559 aaPredicted RBP12.54□□□□□ -0.4
LINC00479-203ENST00000586552 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
LINC00479-203ENST00000586552 NGDNQ8NEJ9 315 aaKnown RBP12.54□□□□□ -0.4
LINC00479-203ENST00000586552 EIF3AQ14152 1382 aaKnown RBP12.54□□□□□ -0.4
LINC00479-203ENST00000586552 EP400Q96L91 3159 aa12.53□□□□□ -0.4
LINC00479-203ENST00000586552 ADGRB2O60241 1585 aa12.52□□□□□ -0.4
LINC00479-203ENST00000586552 WASLO00401 505 aaPredicted RBP12.52□□□□□ -0.41
LINC00479-203ENST00000586552 BAG6P46379 1132 aa12.52□□□□□ -0.41
LINC00479-203ENST00000586552 ADGRB1O14514 1584 aa12.52□□□□□ -0.41
LINC00479-203ENST00000586552 PRR36Q9H6K5 1346 aa12.51□□□□□ -0.41
LINC00479-203ENST00000586552 TULP4Q9NRJ4 1543 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms