RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 KIF1AQ12756 1690 aa25.14■■□□□ 1.62
MBD3-204ENST00000585967 FMN2Q9NZ56 1722 aa25.14■■□□□ 1.61
MBD3-204ENST00000585967 ABCC11Q96J66 1382 aa25.12■■□□□ 1.61
MBD3-204ENST00000585967 COL22A1Q8NFW1 1626 aaPredicted RBP25.12■■□□□ 1.61
MBD3-204ENST00000585967 YTHDC2Q9H6S0 1430 aaKnown RBP25.11■■□□□ 1.61
MBD3-204ENST00000585967 NPHP3Q7Z494 1330 aa25.11■■□□□ 1.61
MBD3-204ENST00000585967 STK26Q9P289 416 aa25.1■■□□□ 1.61
MBD3-204ENST00000585967 NRXN1Q9ULB1 1477 aa25.09■■□□□ 1.61
MBD3-204ENST00000585967 MARF1Q9Y4F3 1742 aaKnown RBP25.09■■□□□ 1.61
MBD3-204ENST00000585967 SOS2Q07890 1332 aaPredicted RBP25.09■■□□□ 1.61
MBD3-204ENST00000585967 CDK12Q9NYV4 1490 aaPredicted RBP25.09■■□□□ 1.61
MBD3-204ENST00000585967 DDX17Q92841 729 aaKnown RBP25.08■■□□□ 1.61
MBD3-204ENST00000585967 ORAI2Q96SN7 254 aa25.08■■□□□ 1.61
MBD3-204ENST00000585967 AFF2P51816 1311 aa25.08■■□□□ 1.6
MBD3-204ENST00000585967 DHX57Q6P158 1386 aaKnown RBP25.06■■□□□ 1.6
MBD3-204ENST00000585967 RXRBP28702 533 aa25.06■■□□□ 1.6
MBD3-204ENST00000585967 ESCO1Q5FWF5 840 aa25.06■■□□□ 1.6
MBD3-204ENST00000585967 C8orf37Q96NL8 207 aa25.04■■□□□ 1.6
MBD3-204ENST00000585967 RGPD8O14715 1765 aaPredicted RBP25.03■■□□□ 1.6
MBD3-204ENST00000585967 TMEM132EQ6IEE7 984 aa25.03■■□□□ 1.6
MBD3-204ENST00000585967 SIRT1Q96EB6 747 aa25.02■■□□□ 1.6
MBD3-204ENST00000585967 C14orf93Q9H972 538 aaKnown RBP25.02■■□□□ 1.6
MBD3-204ENST00000585967 PXDNQ92626 1479 aa25.02■■□□□ 1.6
MBD3-204ENST00000585967 WAPLQ7Z5K2 1190 aa25.01■■□□□ 1.59
MBD3-204ENST00000585967 DLC1Q96QB1 1528 aa25.01■■□□□ 1.59
MBD3-204ENST00000585967 HRCP23327 699 aa24.99■■□□□ 1.59
MBD3-204ENST00000585967 NGLY1Q96IV0 654 aa24.99■■□□□ 1.59
MBD3-204ENST00000585967 ADAMTS2O95450 1211 aa24.98■■□□□ 1.59
MBD3-204ENST00000585967 STAC3Q96MF2 364 aa24.98■■□□□ 1.59
MBD3-204ENST00000585967 PLEKHH1Q9ULM0 1364 aa24.97■■□□□ 1.59
MBD3-204ENST00000585967 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
MBD3-204ENST00000585967 RBM6P78332 1123 aaKnown RBP24.95■■□□□ 1.58
MBD3-204ENST00000585967 CFAP70Q5T0N1 1121 aa24.95■■□□□ 1.58
MBD3-204ENST00000585967 NUTM2FA1L443 756 aa24.94■■□□□ 1.58
MBD3-204ENST00000585967 FOXO3O43524 673 aa24.94■■□□□ 1.58
MBD3-204ENST00000585967 QTRT2Q9H974 415 aaKnown RBP24.93■■□□□ 1.58
MBD3-204ENST00000585967 EIF3AQ14152 1382 aaKnown RBP24.93■■□□□ 1.58
MBD3-204ENST00000585967 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.92■■□□□ 1.58
MBD3-204ENST00000585967 POGKQ9P215 609 aa24.92■■□□□ 1.58
MBD3-204ENST00000585967 ADGRB1O14514 1584 aa24.92■■□□□ 1.58
MBD3-204ENST00000585967 USP21Q9UK80 565 aa24.9■■□□□ 1.58
MBD3-204ENST00000585967 ITSN1Q15811 1721 aa24.89■■□□□ 1.58
MBD3-204ENST00000585967 ANKARQ7Z5J8 1434 aa24.89■■□□□ 1.58
MBD3-204ENST00000585967 PRAM1Q96QH2 718 aa24.89■■□□□ 1.58
MBD3-204ENST00000585967 TRPC5Q9UL62 973 aaPredicted RBP24.89■■□□□ 1.58
MBD3-204ENST00000585967 RGS12O14924 1447 aa24.88■■□□□ 1.57
MBD3-204ENST00000585967 PSME1Q06323 249 aa24.88■■□□□ 1.57
MBD3-204ENST00000585967 DCAF11Q8TEB1 546 aa24.88■■□□□ 1.57
MBD3-204ENST00000585967 ARHGEF28Q8N1W1 1705 aaKnown RBP24.87■■□□□ 1.57
MBD3-204ENST00000585967 XPCQ01831 940 aaPredicted RBP24.87■■□□□ 1.57
MBD3-204ENST00000585967 USP32Q8NFA0 1604 aa24.86■■□□□ 1.57
MBD3-204ENST00000585967 KIAA1210Q9ULL0 1709 aa24.86■■□□□ 1.57
MBD3-204ENST00000585967 PHF8Q9UPP1 1060 aa24.86■■□□□ 1.57
MBD3-204ENST00000585967 TNS3Q68CZ2 1445 aa24.86■■□□□ 1.57
MBD3-204ENST00000585967 SAFB2Q14151 953 aaKnown RBP eCLIP24.85■■□□□ 1.57
MBD3-204ENST00000585967 FNBP4Q8N3X1 1017 aaPredicted RBP24.85■■□□□ 1.57
MBD3-204ENST00000585967 ABCA3Q99758 1704 aa24.84■■□□□ 1.57
MBD3-204ENST00000585967 UPF1Q92900 1129 aaKnown RBP eCLIP24.84■■□□□ 1.572e-6■■□□□ 13.1
MBD3-204ENST00000585967 KDM2AQ9Y2K7 1162 aa24.84■■□□□ 1.57
MBD3-204ENST00000585967 SPATA31A3Q5VYP0 1347 aa24.84■■□□□ 1.57
MBD3-204ENST00000585967 KRT28Q7Z3Y7 464 aa24.83■■□□□ 1.57
MBD3-204ENST00000585967 ARHGEF10O15013 1369 aa24.82■■□□□ 1.56
MBD3-204ENST00000585967 ATRNO75882 1429 aa24.82■■□□□ 1.56
MBD3-204ENST00000585967 HAP1P54257 671 aaPredicted RBP24.82■■□□□ 1.56
MBD3-204ENST00000585967 NWD2Q9ULI1 1742 aa24.82■■□□□ 1.56
MBD3-204ENST00000585967 TULP4Q9NRJ4 1543 aa24.81■■□□□ 1.56
MBD3-204ENST00000585967 TRAK1Q9UPV9 953 aa24.8■■□□□ 1.56
MBD3-204ENST00000585967 PLCH1Q4KWH8 1693 aa24.8■■□□□ 1.56
MBD3-204ENST00000585967 SBNO1A3KN83 1393 aa24.8■■□□□ 1.56
MBD3-204ENST00000585967 ATAD2Q6PL18 1390 aa24.8■■□□□ 1.56
MBD3-204ENST00000585967 TRPM3Q9HCF6 1732 aaPredicted RBP24.77■■□□□ 1.56
MBD3-204ENST00000585967 GPRASP1Q5JY77 1395 aa24.76■■□□□ 1.55
MBD3-204ENST00000585967 BCL9LQ86UU0 1499 aa24.75■■□□□ 1.55
MBD3-204ENST00000585967 MINK1Q8N4C8 1332 aaPredicted RBP24.74■■□□□ 1.55
MBD3-204ENST00000585967 ALS2Q96Q42 1657 aa24.74■■□□□ 1.55
MBD3-204ENST00000585967 SLIT2O94813 1529 aa24.73■■□□□ 1.55
MBD3-204ENST00000585967 LMOD2Q6P5Q4 547 aa24.73■■□□□ 1.55
MBD3-204ENST00000585967 HIRIP3Q9BW71 556 aaPredicted RBP24.72■■□□□ 1.55
MBD3-204ENST00000585967 WASLO00401 505 aaPredicted RBP24.7■■□□□ 1.54
MBD3-204ENST00000585967 UNC5CLQ8IV45 518 aa24.7■■□□□ 1.54
MBD3-204ENST00000585967 PMFBP1Q8TBY8 1022 aa24.7■■□□□ 1.54
MBD3-204ENST00000585967 GJD4Q96KN9 370 aaPredicted RBP24.69■■□□□ 1.54
MBD3-204ENST00000585967 COL14A1Q05707 1796 aaKnown RBP24.67■■□□□ 1.54
MBD3-204ENST00000585967 TOPAZ1Q8N9V7 1692 aa24.67■■□□□ 1.54
MBD3-204ENST00000585967 GLI3P10071 1580 aa24.66■■□□□ 1.54
MBD3-204ENST00000585967 ATP7BP35670 1465 aa24.65■■□□□ 1.54
MBD3-204ENST00000585967 RALGAPBQ86X10 1494 aa24.65■■□□□ 1.54
MBD3-204ENST00000585967 EP400Q96L91 3159 aa24.65■■□□□ 1.54
MBD3-204ENST00000585967 NGDNQ8NEJ9 315 aaKnown RBP24.65■■□□□ 1.54
MBD3-204ENST00000585967 CRYBG1Q9Y4K1 1723 aa24.65■■□□□ 1.54
MBD3-204ENST00000585967 BRWD3Q6RI45 1802 aa24.65■■□□□ 1.54
MBD3-204ENST00000585967 NRAPQ86VF7 1730 aa24.63■■□□□ 1.53
MBD3-204ENST00000585967 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
MBD3-204ENST00000585967 PRR36Q9H6K5 1346 aa24.61■■□□□ 1.53
MBD3-204ENST00000585967 PLEKHG5O94827 1062 aa24.61■■□□□ 1.53
MBD3-204ENST00000585967 CABLES1Q8TDN4 633 aa24.61■■□□□ 1.53
MBD3-204ENST00000585967 CCDC125Q86Z20 511 aa24.6■■□□□ 1.53
MBD3-204ENST00000585967 VPS72Q15906 364 aa24.59■■□□□ 1.53
MBD3-204ENST00000585967 PHRF1Q9P1Y6 1649 aaKnown RBP24.59■■□□□ 1.53
MBD3-204ENST00000585967 PAK3O75914 559 aaPredicted RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms