RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SIRT1Q96EB6 747 aa17.88■□□□□ 0.45
VMP1-202ENST00000585847 TMEM94Q12767 1356 aa17.88■□□□□ 0.45
VMP1-202ENST00000585847 FAM135BQ49AJ0 1406 aa17.88■□□□□ 0.45
VMP1-202ENST00000585847 PROSER2Q86WR7 435 aaPredicted RBP17.87■□□□□ 0.45
VMP1-202ENST00000585847 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
VMP1-202ENST00000585847 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
VMP1-202ENST00000585847 NCOA3Q9Y6Q9 1424 aa17.84■□□□□ 0.45
VMP1-202ENST00000585847 ZNF316A6NFI3 1004 aaPredicted RBP17.84■□□□□ 0.45
VMP1-202ENST00000585847 PRAM1Q96QH2 718 aa17.84■□□□□ 0.45
VMP1-202ENST00000585847 ROBO1Q9Y6N7 1651 aa17.81■□□□□ 0.44
VMP1-202ENST00000585847 ADGRL3Q9HAR2 1447 aa17.81■□□□□ 0.44
VMP1-202ENST00000585847 QRICH2Q9H0J4 1663 aa17.8■□□□□ 0.44
VMP1-202ENST00000585847 SAFB2Q14151 953 aaKnown RBP eCLIP17.79■□□□□ 0.44
VMP1-202ENST00000585847 RGS17Q9UGC6 210 aaPredicted RBP17.79■□□□□ 0.44
VMP1-202ENST00000585847 ADGRB2O60241 1585 aa17.78■□□□□ 0.44
VMP1-202ENST00000585847 USP47Q96K76 1375 aa17.78■□□□□ 0.44
VMP1-202ENST00000585847 CENPJQ9HC77 1338 aaPredicted RBP17.77■□□□□ 0.44
VMP1-202ENST00000585847 POGKQ9P215 609 aa17.77■□□□□ 0.44
VMP1-202ENST00000585847 MSH6P52701 1360 aa17.77■□□□□ 0.43
VMP1-202ENST00000585847 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
VMP1-202ENST00000585847 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
VMP1-202ENST00000585847 MINK1Q8N4C8 1332 aaPredicted RBP17.74■□□□□ 0.43
VMP1-202ENST00000585847 DCCP43146 1447 aa17.74■□□□□ 0.43
VMP1-202ENST00000585847 TULP4Q9NRJ4 1543 aa17.74■□□□□ 0.43
VMP1-202ENST00000585847 ST20-MTHFSA0A0A6YYL1 179 aa17.74■□□□□ 0.43
VMP1-202ENST00000585847 TESK2Q96S53 571 aa17.74■□□□□ 0.43
VMP1-202ENST00000585847 FMN2Q9NZ56 1722 aa17.74■□□□□ 0.43
VMP1-202ENST00000585847 EIF4G2P78344 907 aaKnown RBP eCLIP17.73■□□□□ 0.43
VMP1-202ENST00000585847 HIRIP3Q9BW71 556 aaPredicted RBP17.73■□□□□ 0.43
VMP1-202ENST00000585847 EIF3AQ14152 1382 aaKnown RBP17.73■□□□□ 0.43
VMP1-202ENST00000585847 SBNO2Q9Y2G9 1366 aa17.73■□□□□ 0.43
VMP1-202ENST00000585847 PHLPP1O60346 1717 aa17.72■□□□□ 0.43
VMP1-202ENST00000585847 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
VMP1-202ENST00000585847 USP32Q8NFA0 1604 aa17.72■□□□□ 0.43
VMP1-202ENST00000585847 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
VMP1-202ENST00000585847 POTEAQ6S8J7 498 aa17.71■□□□□ 0.43
VMP1-202ENST00000585847 C14orf37Q86TY3 774 aa17.71■□□□□ 0.43
VMP1-202ENST00000585847 SLAIN2Q9P270 581 aa17.71■□□□□ 0.43
VMP1-202ENST00000585847 MST1RQ04912 1400 aa17.71■□□□□ 0.43
VMP1-202ENST00000585847 WASLO00401 505 aaPredicted RBP17.69■□□□□ 0.42
VMP1-202ENST00000585847 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
VMP1-202ENST00000585847 PRR36Q9H6K5 1346 aa17.68■□□□□ 0.42
VMP1-202ENST00000585847 JCADQ9P266 1359 aa17.67■□□□□ 0.42
VMP1-202ENST00000585847 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
VMP1-202ENST00000585847 C1orf167Q5SNV9 1468 aa17.67■□□□□ 0.42
VMP1-202ENST00000585847 ATF3P18847 181 aa17.66■□□□□ 0.42
VMP1-202ENST00000585847 CDK19Q9BWU1 502 aa17.66■□□□□ 0.42
VMP1-202ENST00000585847 ATP7BP35670 1465 aa17.65■□□□□ 0.42
VMP1-202ENST00000585847 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
VMP1-202ENST00000585847 TOPAZ1Q8N9V7 1692 aa17.64■□□□□ 0.42
VMP1-202ENST00000585847 MEX3CQ5U5Q3 659 aaKnown RBP17.63■□□□□ 0.41
VMP1-202ENST00000585847 ANKARQ7Z5J8 1434 aa17.63■□□□□ 0.41
VMP1-202ENST00000585847 C11orf95C9JLR9 678 aaPredicted RBP17.62■□□□□ 0.41
VMP1-202ENST00000585847 CABP2Q9NPB3 220 aa17.62■□□□□ 0.41
VMP1-202ENST00000585847 EVC2Q86UK5 1308 aa17.62■□□□□ 0.41
VMP1-202ENST00000585847 ORAI2Q96SN7 254 aa17.61■□□□□ 0.41
VMP1-202ENST00000585847 COL16A1Q07092 1604 aaPredicted RBP17.61■□□□□ 0.41
VMP1-202ENST00000585847 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
VMP1-202ENST00000585847 NUDT16Q96DE0 195 aaKnown RBP17.6■□□□□ 0.41
VMP1-202ENST00000585847 SPATA31A6Q5VVP1 1343 aa17.59■□□□□ 0.41
VMP1-202ENST00000585847 ITSN1Q15811 1721 aa17.58■□□□□ 0.41
VMP1-202ENST00000585847 SRPK2P78362 688 aaKnown RBP17.57■□□□□ 0.4
VMP1-202ENST00000585847 TMF1P82094 1093 aa17.57■□□□□ 0.4
VMP1-202ENST00000585847 PUS7Q96PZ0 661 aaKnown RBP17.57■□□□□ 0.4
VMP1-202ENST00000585847 NHSL1Q5SYE7 1610 aa17.57■□□□□ 0.4
VMP1-202ENST00000585847 MYOM1P52179 1685 aa17.56■□□□□ 0.4
VMP1-202ENST00000585847 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
VMP1-202ENST00000585847 KIF1AQ12756 1690 aa17.55■□□□□ 0.4
VMP1-202ENST00000585847 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
VMP1-202ENST00000585847 DIEXFQ68CQ4 756 aaKnown RBP17.55■□□□□ 0.4
VMP1-202ENST00000585847 CCDC61Q9Y6R9 512 aa17.55■□□□□ 0.4
VMP1-202ENST00000585847 LRP6O75581 1613 aa17.54■□□□□ 0.4
VMP1-202ENST00000585847 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
VMP1-202ENST00000585847 DDX17Q92841 729 aaKnown RBP17.54■□□□□ 0.4
VMP1-202ENST00000585847 PHF8Q9UPP1 1060 aa17.54■□□□□ 0.4
VMP1-202ENST00000585847 SHPRHQ149N8 1683 aa17.54■□□□□ 0.4
VMP1-202ENST00000585847 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
VMP1-202ENST00000585847 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
VMP1-202ENST00000585847 CD163L1Q9NR16 1453 aa17.53■□□□□ 0.4
VMP1-202ENST00000585847 PLEKHG3A1L390 1219 aa17.53■□□□□ 0.4
VMP1-202ENST00000585847 PMFBP1Q8TBY8 1022 aa17.53■□□□□ 0.4
VMP1-202ENST00000585847 CABP1Q9NZU7 370 aa17.52■□□□□ 0.4
VMP1-202ENST00000585847 AKAP12Q02952 1782 aa17.52■□□□□ 0.4
VMP1-202ENST00000585847 POLR3AO14802 1390 aaPredicted RBP17.52■□□□□ 0.39
VMP1-202ENST00000585847 KIF7Q2M1P5 1343 aa17.51■□□□□ 0.39
VMP1-202ENST00000585847 CDCA8Q53HL2 280 aa17.51■□□□□ 0.39
VMP1-202ENST00000585847 PXDNQ92626 1479 aa17.5■□□□□ 0.39
VMP1-202ENST00000585847 NUTM2BA6NNL0 878 aaPredicted RBP17.5■□□□□ 0.39
VMP1-202ENST00000585847 NUTM2EB1AL46 878 aaPredicted RBP17.5■□□□□ 0.39
VMP1-202ENST00000585847 NUTM2AQ8IVF1 878 aaPredicted RBP17.5■□□□□ 0.39
VMP1-202ENST00000585847 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
VMP1-202ENST00000585847 ACEP12821 1306 aa17.49■□□□□ 0.39
VMP1-202ENST00000585847 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
VMP1-202ENST00000585847 CPSF1Q10570 1443 aaKnown RBP17.49■□□□□ 0.39
VMP1-202ENST00000585847 FOXO3O43524 673 aa17.49■□□□□ 0.39
VMP1-202ENST00000585847 TRPM3Q9HCF6 1732 aaPredicted RBP17.49■□□□□ 0.39
VMP1-202ENST00000585847 MON2Q7Z3U7 1717 aa17.48■□□□□ 0.39
VMP1-202ENST00000585847 CCDC7Q96M83 1385 aa17.48■□□□□ 0.39
VMP1-202ENST00000585847 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
VMP1-202ENST00000585847 RXRBP28702 533 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms