RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 DDX17Q92841 729 aaKnown RBP14.2□□□□□ -0.14
SDF2-203ENST00000585749 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
SDF2-203ENST00000585749 FAM50AQ14320 339 aaKnown RBP14.19□□□□□ -0.14
SDF2-203ENST00000585749 E9PCH4 1651 aa14.19□□□□□ -0.14
SDF2-203ENST00000585749 ADAMTS2O95450 1211 aa14.18□□□□□ -0.14
SDF2-203ENST00000585749 LAMC1P11047 1609 aa14.18□□□□□ -0.14
SDF2-203ENST00000585749 ANKRD50Q9ULJ7 1429 aa14.17□□□□□ -0.14
SDF2-203ENST00000585749 NALCNQ8IZF0 1738 aa14.17□□□□□ -0.14
SDF2-203ENST00000585749 ADGRL3Q9HAR2 1447 aa14.16□□□□□ -0.14
SDF2-203ENST00000585749 USP21Q9UK80 565 aa14.16□□□□□ -0.14
SDF2-203ENST00000585749 ATRNO75882 1429 aa14.15□□□□□ -0.14
SDF2-203ENST00000585749 TRPC5Q9UL62 973 aaPredicted RBP14.15□□□□□ -0.14
SDF2-203ENST00000585749 FNBP4Q8N3X1 1017 aaPredicted RBP14.14□□□□□ -0.15
SDF2-203ENST00000585749 RRBP1Q9P2E9 1410 aaKnown RBP14.14□□□□□ -0.15
SDF2-203ENST00000585749 ROCK1Q13464 1354 aa14.13□□□□□ -0.15
SDF2-203ENST00000585749 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
SDF2-203ENST00000585749 CCDC125Q86Z20 511 aa14.13□□□□□ -0.15
SDF2-203ENST00000585749 PTCH1Q13635 1447 aa14.13□□□□□ -0.15
SDF2-203ENST00000585749 C1orf167Q5SNV9 1468 aa14.12□□□□□ -0.15
SDF2-203ENST00000585749 IQGAP3Q86VI3 1631 aa14.12□□□□□ -0.15
SDF2-203ENST00000585749 COL22A1Q8NFW1 1626 aaPredicted RBP14.12□□□□□ -0.15
SDF2-203ENST00000585749 METP08581 1390 aa14.12□□□□□ -0.15
SDF2-203ENST00000585749 SOS2Q07890 1332 aaPredicted RBP14.11□□□□□ -0.15
SDF2-203ENST00000585749 LRP5O75197 1615 aa14.1□□□□□ -0.15
SDF2-203ENST00000585749 BCL9LQ86UU0 1499 aa14.09□□□□□ -0.15
SDF2-203ENST00000585749 MARF1Q9Y4F3 1742 aaKnown RBP14.09□□□□□ -0.15
SDF2-203ENST00000585749 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
SDF2-203ENST00000585749 MYOM2P54296 1465 aa14.07□□□□□ -0.16
SDF2-203ENST00000585749 ORAI2Q96SN7 254 aa14.06□□□□□ -0.16
SDF2-203ENST00000585749 BLMP54132 1417 aaPredicted RBP14.06□□□□□ -0.16
SDF2-203ENST00000585749 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.05□□□□□ -0.16
SDF2-203ENST00000585749 SPHKAPQ2M3C7 1700 aa14.04□□□□□ -0.16
SDF2-203ENST00000585749 GJD4Q96KN9 370 aaPredicted RBP14.03□□□□□ -0.16
SDF2-203ENST00000585749 NEXMIFQ5QGS0 1516 aa14.03□□□□□ -0.16
SDF2-203ENST00000585749 GLI3P10071 1580 aa14.03□□□□□ -0.16
SDF2-203ENST00000585749 BRWD3Q6RI45 1802 aa14.03□□□□□ -0.16
SDF2-203ENST00000585749 ITGAEP38570 1179 aa14.02□□□□□ -0.17
SDF2-203ENST00000585749 DEFB132Q7Z7B7 95 aa14.01□□□□□ -0.17
SDF2-203ENST00000585749 RALGAPBQ86X10 1494 aa14□□□□□ -0.17
SDF2-203ENST00000585749 PXDNQ92626 1479 aa14□□□□□ -0.17
SDF2-203ENST00000585749 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
SDF2-203ENST00000585749 ZNF326Q5BKZ1 582 aaKnown RBP14□□□□□ -0.17
SDF2-203ENST00000585749 PRAG1Q86YV5 1406 aa13.99□□□□□ -0.17
SDF2-203ENST00000585749 NUP155O75694 1391 aa13.99□□□□□ -0.17
SDF2-203ENST00000585749 SLIT2O94813 1529 aa13.99□□□□□ -0.17
SDF2-203ENST00000585749 NAIPQ13075 1403 aa13.98□□□□□ -0.17
SDF2-203ENST00000585749 CLTCL1P53675 1640 aa13.97□□□□□ -0.17
SDF2-203ENST00000585749 NPHP3Q7Z494 1330 aa13.97□□□□□ -0.17
SDF2-203ENST00000585749 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.17
SDF2-203ENST00000585749 UNC5CLQ8IV45 518 aa13.96□□□□□ -0.17
SDF2-203ENST00000585749 HFM1A2PYH4 1435 aa13.96□□□□□ -0.18
SDF2-203ENST00000585749 CDC42BPGQ6DT37 1551 aa13.96□□□□□ -0.18
SDF2-203ENST00000585749 SF3B2Q13435 895 aaKnown RBP13.95□□□□□ -0.18
SDF2-203ENST00000585749 USP32Q8NFA0 1604 aa13.93□□□□□ -0.18
SDF2-203ENST00000585749 KIF1BO60333 1816 aa13.93□□□□□ -0.18
SDF2-203ENST00000585749 PSDA5PKW4 1024 aaPredicted RBP13.93□□□□□ -0.18
SDF2-203ENST00000585749 HRCP23327 699 aa13.93□□□□□ -0.18
SDF2-203ENST00000585749 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
SDF2-203ENST00000585749 ESCO1Q5FWF5 840 aa13.93□□□□□ -0.18
SDF2-203ENST00000585749 FOXO3O43524 673 aa13.92□□□□□ -0.18
SDF2-203ENST00000585749 SEPT12Q8IYM1 358 aa13.92□□□□□ -0.18
SDF2-203ENST00000585749 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
SDF2-203ENST00000585749 PLCH1Q4KWH8 1693 aa13.89□□□□□ -0.19
SDF2-203ENST00000585749 LRPPRCP42704 1394 aaKnown RBP13.89□□□□□ -0.19
SDF2-203ENST00000585749 ONECUT3O60422 494 aaPredicted RBP13.89□□□□□ -0.19
SDF2-203ENST00000585749 NWD2Q9ULI1 1742 aa13.89□□□□□ -0.19
SDF2-203ENST00000585749 VPS72Q15906 364 aa13.88□□□□□ -0.19
SDF2-203ENST00000585749 SPATA31A3Q5VYP0 1347 aa13.88□□□□□ -0.19
SDF2-203ENST00000585749 VGFO15240 615 aaPredicted RBP13.87□□□□□ -0.19
SDF2-203ENST00000585749 BAG6P46379 1132 aa13.87□□□□□ -0.19
SDF2-203ENST00000585749 KRT27Q7Z3Y8 459 aa13.87□□□□□ -0.19
SDF2-203ENST00000585749 KIF1AQ12756 1690 aa13.86□□□□□ -0.19
SDF2-203ENST00000585749 ABCA3Q99758 1704 aa13.86□□□□□ -0.19
SDF2-203ENST00000585749 PPLO60437 1756 aa13.86□□□□□ -0.19
SDF2-203ENST00000585749 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
SDF2-203ENST00000585749 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
SDF2-203ENST00000585749 CCDC144AA2RUR9 1427 aa13.84□□□□□ -0.19
SDF2-203ENST00000585749 NUTM2FA1L443 756 aa13.84□□□□□ -0.19
SDF2-203ENST00000585749 NRAPQ86VF7 1730 aa13.83□□□□□ -0.2
SDF2-203ENST00000585749 TNS3Q68CZ2 1445 aa13.82□□□□□ -0.2
SDF2-203ENST00000585749 TNS1Q9HBL0 1735 aaKnown RBP13.82□□□□□ -0.2
SDF2-203ENST00000585749 EN1Q05925 392 aaPredicted RBP13.82□□□□□ -0.2
SDF2-203ENST00000585749 R3HDM1Q15032 1099 aaKnown RBP13.82□□□□□ -0.2
SDF2-203ENST00000585749 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
SDF2-203ENST00000585749 DISP2A7MBM2 1401 aa13.81□□□□□ -0.2
SDF2-203ENST00000585749 TECPR2O15040 1411 aa13.81□□□□□ -0.2
SDF2-203ENST00000585749 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
SDF2-203ENST00000585749 RPGRIP1LQ68CZ1 1315 aa13.81□□□□□ -0.2
SDF2-203ENST00000585749 KRT28Q7Z3Y7 464 aa13.8□□□□□ -0.2
SDF2-203ENST00000585749 WAPLQ7Z5K2 1190 aa13.8□□□□□ -0.2
SDF2-203ENST00000585749 KNDC1Q76NI1 1749 aa13.8□□□□□ -0.2
SDF2-203ENST00000585749 RGPD8O14715 1765 aaPredicted RBP13.79□□□□□ -0.2
SDF2-203ENST00000585749 YY1P25490 414 aa13.79□□□□□ -0.2
SDF2-203ENST00000585749 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
SDF2-203ENST00000585749 PLEKHH1Q9ULM0 1364 aa13.79□□□□□ -0.2
SDF2-203ENST00000585749 A0A0G2JS52 829 aa13.78□□□□□ -0.2
SDF2-203ENST00000585749 MYT1Q01538 1121 aa13.78□□□□□ -0.2
SDF2-203ENST00000585749 FAM98CQ17RN3 349 aaKnown RBP13.78□□□□□ -0.2
SDF2-203ENST00000585749 ACIN1Q9UKV3 1341 aaKnown RBP13.78□□□□□ -0.2
SDF2-203ENST00000585749 IFT172Q9UG01 1749 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms