RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 TMF1P82094 1093 aa31.29■■■□□ 2.6
LAMA3-204ENST00000585600 CHD2O14647 1828 aaKnown RBP31.27■■■□□ 2.6
LAMA3-204ENST00000585600 GTF3C3Q9Y5Q9 886 aa31.27■■■□□ 2.6
LAMA3-204ENST00000585600 CCDC7Q96M83 1385 aa31.26■■■□□ 2.6
LAMA3-204ENST00000585600 MINK1Q8N4C8 1332 aaPredicted RBP31.26■■■□□ 2.59
LAMA3-204ENST00000585600 DMRT2Q9Y5R5 561 aa31.26■■■□□ 2.59
LAMA3-204ENST00000585600 QRICH2Q9H0J4 1663 aa31.25■■■□□ 2.59
LAMA3-204ENST00000585600 SLC24A1O60721 1099 aa31.24■■■□□ 2.59
LAMA3-204ENST00000585600 NWD1Q149M9 1564 aa31.22■■■□□ 2.59
LAMA3-204ENST00000585600 RBM33Q96EV2 1170 aaKnown RBP31.19■■■□□ 2.58
LAMA3-204ENST00000585600 POLR3GLQ9BT43 218 aa31.18■■■□□ 2.58
LAMA3-204ENST00000585600 TULP4Q9NRJ4 1543 aa31.18■■■□□ 2.58
LAMA3-204ENST00000585600 EVC2Q86UK5 1308 aa31.17■■■□□ 2.58
LAMA3-204ENST00000585600 ZNF335Q9H4Z2 1342 aaPredicted RBP31.17■■■□□ 2.58
LAMA3-204ENST00000585600 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.15■■■□□ 2.58
LAMA3-204ENST00000585600 CDCA8Q53HL2 280 aa31.14■■■□□ 2.58
LAMA3-204ENST00000585600 DDX10Q13206 875 aaKnown RBP31.14■■■□□ 2.58
LAMA3-204ENST00000585600 NKTRP30414 1462 aaKnown RBP31.14■■■□□ 2.58
LAMA3-204ENST00000585600 PROSER2Q86WR7 435 aaPredicted RBP31.13■■■□□ 2.57
LAMA3-204ENST00000585600 CDK19Q9BWU1 502 aa31.13■■■□□ 2.57
LAMA3-204ENST00000585600 STRCP1A6NGW2 1772 aa31.13■■■□□ 2.57
LAMA3-204ENST00000585600 WASLO00401 505 aaPredicted RBP31.12■■■□□ 2.57
LAMA3-204ENST00000585600 CABP2Q9NPB3 220 aa31.12■■■□□ 2.57
LAMA3-204ENST00000585600 PUS7Q96PZ0 661 aaKnown RBP31.1■■■□□ 2.57
LAMA3-204ENST00000585600 SRPK2P78362 688 aaKnown RBP31.08■■■□□ 2.57
LAMA3-204ENST00000585600 ADGRB2O60241 1585 aa31.05■■■□□ 2.56
LAMA3-204ENST00000585600 TMEM94Q12767 1356 aa31.05■■■□□ 2.56
LAMA3-204ENST00000585600 ADGRL3Q9HAR2 1447 aa31.02■■■□□ 2.56
LAMA3-204ENST00000585600 LRRC7Q96NW7 1537 aa30.99■■■□□ 2.55
LAMA3-204ENST00000585600 NCOA3Q9Y6Q9 1424 aa30.99■■■□□ 2.55
LAMA3-204ENST00000585600 C14orf37Q86TY3 774 aa30.99■■■□□ 2.55
LAMA3-204ENST00000585600 PRR36Q9H6K5 1346 aa30.98■■■□□ 2.55
LAMA3-204ENST00000585600 SLC12A5Q9H2X9 1139 aa30.98■■■□□ 2.55
LAMA3-204ENST00000585600 NALCNQ8IZF0 1738 aa30.98■■■□□ 2.55
LAMA3-204ENST00000585600 ATAD2Q6PL18 1390 aa30.98■■■□□ 2.55
LAMA3-204ENST00000585600 NUTM2FA1L443 756 aa30.97■■■□□ 2.55
LAMA3-204ENST00000585600 NUDT16Q96DE0 195 aaKnown RBP30.97■■■□□ 2.55
LAMA3-204ENST00000585600 TMC1Q8TDI8 760 aa30.96■■■□□ 2.55
LAMA3-204ENST00000585600 C19orf44Q9H6X5 657 aa30.96■■■□□ 2.55
LAMA3-204ENST00000585600 PANK3Q9H999 370 aa30.94■■■□□ 2.54
LAMA3-204ENST00000585600 ATP7BP35670 1465 aa30.93■■■□□ 2.54
LAMA3-204ENST00000585600 CDC42BPGQ6DT37 1551 aa30.92■■■□□ 2.54
LAMA3-204ENST00000585600 CABP1Q9NZU7 370 aa30.92■■■□□ 2.54
LAMA3-204ENST00000585600 CCDC61Q9Y6R9 512 aa30.92■■■□□ 2.54
LAMA3-204ENST00000585600 MYOM1P52179 1685 aa30.92■■■□□ 2.54
LAMA3-204ENST00000585600 CCER2I3L3R5 266 aa30.91■■■□□ 2.54
LAMA3-204ENST00000585600 LTBP4Q8N2S1 1624 aa30.89■■■□□ 2.54
LAMA3-204ENST00000585600 ANP32CO43423 234 aa30.88■■■□□ 2.53
LAMA3-204ENST00000585600 NINLQ9Y2I6 1382 aa30.88■■■□□ 2.53
LAMA3-204ENST00000585600 PER1O15534 1290 aaPredicted RBP30.87■■■□□ 2.53
LAMA3-204ENST00000585600 PPIP5K1Q6PFW1 1433 aa30.86■■■□□ 2.53
LAMA3-204ENST00000585600 USP32Q8NFA0 1604 aa30.86■■■□□ 2.53
LAMA3-204ENST00000585600 ANKARQ7Z5J8 1434 aa30.85■■■□□ 2.53
LAMA3-204ENST00000585600 XIRP1Q702N8 1843 aaKnown RBP30.85■■■□□ 2.53
LAMA3-204ENST00000585600 FMN2Q9NZ56 1722 aa30.84■■■□□ 2.53
LAMA3-204ENST00000585600 MSH6P52701 1360 aa30.84■■■□□ 2.53
LAMA3-204ENST00000585600 CARD14Q9BXL6 1004 aa30.84■■■□□ 2.53
LAMA3-204ENST00000585600 DCCP43146 1447 aa30.84■■■□□ 2.53
LAMA3-204ENST00000585600 CD163L1Q9NR16 1453 aa30.84■■■□□ 2.53
LAMA3-204ENST00000585600 ATF3P18847 181 aa30.82■■■□□ 2.52
LAMA3-204ENST00000585600 ANKRD36BQ8N2N9 1353 aa30.82■■■□□ 2.52
LAMA3-204ENST00000585600 PLEKHG3A1L390 1219 aa30.82■■■□□ 2.52
LAMA3-204ENST00000585600 CADPS2Q86UW7 1296 aa30.8■■■□□ 2.52
LAMA3-204ENST00000585600 A0A1W2PP64 1363 aa30.8■■■□□ 2.52
LAMA3-204ENST00000585600 PMFBP1Q8TBY8 1022 aa30.77■■■□□ 2.52
LAMA3-204ENST00000585600 TERF2IPQ9NYB0 399 aa30.77■■■□□ 2.52
LAMA3-204ENST00000585600 MST1RQ04912 1400 aa30.77■■■□□ 2.52
LAMA3-204ENST00000585600 TOPAZ1Q8N9V7 1692 aa30.77■■■□□ 2.52
LAMA3-204ENST00000585600 C1orf167Q5SNV9 1468 aa30.76■■■□□ 2.52
LAMA3-204ENST00000585600 CPSF1Q10570 1443 aaKnown RBP30.76■■■□□ 2.51
LAMA3-204ENST00000585600 ORAI2Q96SN7 254 aa30.75■■■□□ 2.51
LAMA3-204ENST00000585600 ACEP12821 1306 aa30.75■■■□□ 2.51
LAMA3-204ENST00000585600 HDGFL2Q7Z4V5 671 aaPredicted RBP30.75■■■□□ 2.51
LAMA3-204ENST00000585600 ESCO1Q5FWF5 840 aa30.74■■■□□ 2.51
LAMA3-204ENST00000585600 PHF8Q9UPP1 1060 aa30.73■■■□□ 2.51
LAMA3-204ENST00000585600 KNSTRNQ9Y448 316 aa30.73■■■□□ 2.51
LAMA3-204ENST00000585600 RGPD8O14715 1765 aaPredicted RBP30.72■■■□□ 2.51
LAMA3-204ENST00000585600 NSD3Q9BZ95 1437 aa30.72■■■□□ 2.51
LAMA3-204ENST00000585600 POLR3AO14802 1390 aaPredicted RBP30.71■■■□□ 2.51
LAMA3-204ENST00000585600 AMER1Q5JTC6 1135 aaPredicted RBP30.7■■■□□ 2.5
LAMA3-204ENST00000585600 ZNF692Q9BU19 519 aaPredicted RBP30.7■■■□□ 2.5
LAMA3-204ENST00000585600 NGDNQ8NEJ9 315 aaKnown RBP30.68■■■□□ 2.5
LAMA3-204ENST00000585600 KTN1Q86UP2 1357 aaKnown RBP30.68■■■□□ 2.5
LAMA3-204ENST00000585600 SLAIN2Q9P270 581 aa30.67■■■□□ 2.5
LAMA3-204ENST00000585600 CNGB1Q14028 1251 aaPredicted RBP30.66■■■□□ 2.5
LAMA3-204ENST00000585600 ITSN1Q15811 1721 aa30.66■■■□□ 2.5
LAMA3-204ENST00000585600 CC2D1BQ5T0F9 858 aaKnown RBP30.63■■■□□ 2.49
LAMA3-204ENST00000585600 USP6P35125 1406 aa30.62■■■□□ 2.49
LAMA3-204ENST00000585600 PRKRIP1Q9H875 184 aaPredicted RBP30.62■■■□□ 2.49
LAMA3-204ENST00000585600 FOXO3O43524 673 aa30.61■■■□□ 2.49
LAMA3-204ENST00000585600 PELP1Q8IZL8 1130 aaKnown RBP30.61■■■□□ 2.49
LAMA3-204ENST00000585600 EDC4Q6P2E9 1401 aaKnown RBP30.61■■■□□ 2.49
LAMA3-204ENST00000585600 NPC1L1Q9UHC9 1359 aa30.6■■■□□ 2.49
LAMA3-204ENST00000585600 SSH2Q76I76 1423 aa30.6■■■□□ 2.49
LAMA3-204ENST00000585600 CGNL1Q0VF96 1302 aa30.59■■■□□ 2.49
LAMA3-204ENST00000585600 BRINP3Q76B58 766 aa30.59■■■□□ 2.49
LAMA3-204ENST00000585600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.59■■■□□ 2.49
LAMA3-204ENST00000585600 AKAP12Q02952 1782 aa30.59■■■□□ 2.49
LAMA3-204ENST00000585600 FYB1O15117 783 aa30.58■■■□□ 2.49
LAMA3-204ENST00000585600 TTC21BQ7Z4L5 1316 aa30.57■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms