RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
ATG4D-202ENST00000585437 ATF3P18847 181 aa12.62□□□□□ -0.39
ATG4D-202ENST00000585437 PLEKHH1Q9ULM0 1364 aa12.61□□□□□ -0.39
ATG4D-202ENST00000585437 CFAP70Q5T0N1 1121 aa12.61□□□□□ -0.39
ATG4D-202ENST00000585437 TMEM132EQ6IEE7 984 aa12.6□□□□□ -0.39
ATG4D-202ENST00000585437 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
ATG4D-202ENST00000585437 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
ATG4D-202ENST00000585437 SIRT1Q96EB6 747 aa12.6□□□□□ -0.39
ATG4D-202ENST00000585437 ITSN1Q15811 1721 aa12.59□□□□□ -0.39
ATG4D-202ENST00000585437 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
ATG4D-202ENST00000585437 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
ATG4D-202ENST00000585437 DISP3Q9P2K9 1392 aa12.57□□□□□ -0.4
ATG4D-202ENST00000585437 QRICH2Q9H0J4 1663 aa12.57□□□□□ -0.4
ATG4D-202ENST00000585437 MARF1Q9Y4F3 1742 aaKnown RBP12.57□□□□□ -0.4
ATG4D-202ENST00000585437 JCADQ9P266 1359 aa12.56□□□□□ -0.4
ATG4D-202ENST00000585437 STK26Q9P289 416 aa12.56□□□□□ -0.4
ATG4D-202ENST00000585437 PXDNQ92626 1479 aa12.56□□□□□ -0.4
ATG4D-202ENST00000585437 LRP6O75581 1613 aa12.55□□□□□ -0.4
ATG4D-202ENST00000585437 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
ATG4D-202ENST00000585437 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
ATG4D-202ENST00000585437 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
ATG4D-202ENST00000585437 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
ATG4D-202ENST00000585437 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
ATG4D-202ENST00000585437 ANKARQ7Z5J8 1434 aa12.53□□□□□ -0.4
ATG4D-202ENST00000585437 ILDR2Q71H61 639 aa12.52□□□□□ -0.41
ATG4D-202ENST00000585437 L3MBTL2Q969R5 705 aa12.51□□□□□ -0.41
ATG4D-202ENST00000585437 PRAM1Q96QH2 718 aa12.51□□□□□ -0.41
ATG4D-202ENST00000585437 ORAI2Q96SN7 254 aa12.51□□□□□ -0.41
ATG4D-202ENST00000585437 SIN3AQ96ST3 1273 aa12.51□□□□□ -0.41
ATG4D-202ENST00000585437 SOS2Q07890 1332 aaPredicted RBP12.51□□□□□ -0.41
ATG4D-202ENST00000585437 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
ATG4D-202ENST00000585437 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
ATG4D-202ENST00000585437 CRYBG1Q9Y4K1 1723 aa12.51□□□□□ -0.41
ATG4D-202ENST00000585437 SPATA31A6Q5VVP1 1343 aa12.5□□□□□ -0.41
ATG4D-202ENST00000585437 ATP7BP35670 1465 aa12.5□□□□□ -0.41
ATG4D-202ENST00000585437 TRAK1Q9UPV9 953 aa12.49□□□□□ -0.41
ATG4D-202ENST00000585437 RALGAPBQ86X10 1494 aa12.48□□□□□ -0.41
ATG4D-202ENST00000585437 DDX17Q92841 729 aaKnown RBP12.48□□□□□ -0.41
ATG4D-202ENST00000585437 EIF3AQ14152 1382 aaKnown RBP12.47□□□□□ -0.41
ATG4D-202ENST00000585437 GPRASP1Q5JY77 1395 aa12.47□□□□□ -0.41
ATG4D-202ENST00000585437 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
ATG4D-202ENST00000585437 NBPF1Q3BBV0 1214 aa12.47□□□□□ -0.41
ATG4D-202ENST00000585437 LRRC59Q96AG4 307 aaKnown RBP12.46□□□□□ -0.41
ATG4D-202ENST00000585437 POGKQ9P215 609 aa12.46□□□□□ -0.41
ATG4D-202ENST00000585437 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.45□□□□□ -0.42
ATG4D-202ENST00000585437 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
ATG4D-202ENST00000585437 RGS17Q9UGC6 210 aaPredicted RBP12.45□□□□□ -0.42
ATG4D-202ENST00000585437 PRR36Q9H6K5 1346 aa12.44□□□□□ -0.42
ATG4D-202ENST00000585437 ESCO1Q5FWF5 840 aa12.44□□□□□ -0.42
ATG4D-202ENST00000585437 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
ATG4D-202ENST00000585437 MINK1Q8N4C8 1332 aaPredicted RBP12.43□□□□□ -0.42
ATG4D-202ENST00000585437 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
ATG4D-202ENST00000585437 NEUROD1Q13562 356 aa12.43□□□□□ -0.42
ATG4D-202ENST00000585437 TNS3Q68CZ2 1445 aa12.43□□□□□ -0.42
ATG4D-202ENST00000585437 TONSLQ96HA7 1378 aa12.43□□□□□ -0.42
ATG4D-202ENST00000585437 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
ATG4D-202ENST00000585437 PHRF1Q9P1Y6 1649 aaKnown RBP12.42□□□□□ -0.42
ATG4D-202ENST00000585437 WASLO00401 505 aaPredicted RBP12.42□□□□□ -0.42
ATG4D-202ENST00000585437 PHF23Q9BUL5 403 aaPredicted RBP12.42□□□□□ -0.42
ATG4D-202ENST00000585437 HIRIP3Q9BW71 556 aaPredicted RBP12.42□□□□□ -0.42
ATG4D-202ENST00000585437 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
ATG4D-202ENST00000585437 FOXO3O43524 673 aa12.41□□□□□ -0.42
ATG4D-202ENST00000585437 NBPF8Q3BBV2 869 aa12.41□□□□□ -0.42
ATG4D-202ENST00000585437 NWD2Q9ULI1 1742 aa12.41□□□□□ -0.42
ATG4D-202ENST00000585437 PHF8Q9UPP1 1060 aa12.41□□□□□ -0.42
ATG4D-202ENST00000585437 SBNO1A3KN83 1393 aa12.41□□□□□ -0.42
ATG4D-202ENST00000585437 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
ATG4D-202ENST00000585437 CENPJQ9HC77 1338 aaPredicted RBP12.4□□□□□ -0.42
ATG4D-202ENST00000585437 NRKQ7Z2Y5 1582 aa12.4□□□□□ -0.42
ATG4D-202ENST00000585437 SBNO2Q9Y2G9 1366 aa12.4□□□□□ -0.42
ATG4D-202ENST00000585437 SPATA31A3Q5VYP0 1347 aa12.39□□□□□ -0.43
ATG4D-202ENST00000585437 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
ATG4D-202ENST00000585437 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
ATG4D-202ENST00000585437 MON2Q7Z3U7 1717 aa12.39□□□□□ -0.43
ATG4D-202ENST00000585437 NRAPQ86VF7 1730 aa12.39□□□□□ -0.43
ATG4D-202ENST00000585437 XPCQ01831 940 aaPredicted RBP12.37□□□□□ -0.43
ATG4D-202ENST00000585437 USP54Q70EL1 1684 aa12.36□□□□□ -0.43
ATG4D-202ENST00000585437 ARHGEF10O15013 1369 aa12.36□□□□□ -0.43
ATG4D-202ENST00000585437 POTEAQ6S8J7 498 aa12.36□□□□□ -0.43
ATG4D-202ENST00000585437 KRT28Q7Z3Y7 464 aa12.36□□□□□ -0.43
ATG4D-202ENST00000585437 PIK3C2AO00443 1686 aa12.35□□□□□ -0.43
ATG4D-202ENST00000585437 CDK12Q9NYV4 1490 aaPredicted RBP12.35□□□□□ -0.43
ATG4D-202ENST00000585437 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
ATG4D-202ENST00000585437 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
ATG4D-202ENST00000585437 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
ATG4D-202ENST00000585437 PPIP5K1Q6PFW1 1433 aa12.35□□□□□ -0.43
ATG4D-202ENST00000585437 SLIT2O94813 1529 aa12.34□□□□□ -0.43
ATG4D-202ENST00000585437 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
ATG4D-202ENST00000585437 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
ATG4D-202ENST00000585437 SOCS7O14512 581 aa12.34□□□□□ -0.43
ATG4D-202ENST00000585437 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
ATG4D-202ENST00000585437 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
ATG4D-202ENST00000585437 AFF2P51816 1311 aa12.34□□□□□ -0.43
ATG4D-202ENST00000585437 PSME1Q06323 249 aa12.33□□□□□ -0.44
ATG4D-202ENST00000585437 MEX3CQ5U5Q3 659 aaKnown RBP12.33□□□□□ -0.44
ATG4D-202ENST00000585437 BCL9LQ86UU0 1499 aa12.33□□□□□ -0.44
ATG4D-202ENST00000585437 PLEKHG3A1L390 1219 aa12.32□□□□□ -0.44
ATG4D-202ENST00000585437 ZNF772Q68DY9 489 aaPredicted RBP12.32□□□□□ -0.44
ATG4D-202ENST00000585437 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
ATG4D-202ENST00000585437 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms