RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 PROSER2Q86WR7 435 aaPredicted RBP17.98■□□□□ 0.47
TRIM47-202ENST00000585333 ADGRB2O60241 1585 aa17.98■□□□□ 0.47
TRIM47-202ENST00000585333 ATAD2Q6PL18 1390 aa17.95■□□□□ 0.46
TRIM47-202ENST00000585333 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
TRIM47-202ENST00000585333 WAPLQ7Z5K2 1190 aa17.95■□□□□ 0.46
TRIM47-202ENST00000585333 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
TRIM47-202ENST00000585333 ADGRL3Q9HAR2 1447 aa17.95■□□□□ 0.46
TRIM47-202ENST00000585333 SAFB2Q14151 953 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRIM47-202ENST00000585333 DCCP43146 1447 aa17.94■□□□□ 0.46
TRIM47-202ENST00000585333 MINK1Q8N4C8 1332 aaPredicted RBP17.94■□□□□ 0.46
TRIM47-202ENST00000585333 CDC42BPGQ6DT37 1551 aa17.92■□□□□ 0.46
TRIM47-202ENST00000585333 WASLO00401 505 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-202ENST00000585333 C19orf44Q9H6X5 657 aa17.92■□□□□ 0.46
TRIM47-202ENST00000585333 ZNF335Q9H4Z2 1342 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-202ENST00000585333 MSH6P52701 1360 aa17.91■□□□□ 0.46
TRIM47-202ENST00000585333 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
TRIM47-202ENST00000585333 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
TRIM47-202ENST00000585333 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
TRIM47-202ENST00000585333 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-202ENST00000585333 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
TRIM47-202ENST00000585333 ANKARQ7Z5J8 1434 aa17.89■□□□□ 0.46
TRIM47-202ENST00000585333 KIF7Q2M1P5 1343 aa17.89■□□□□ 0.45
TRIM47-202ENST00000585333 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
TRIM47-202ENST00000585333 TULP4Q9NRJ4 1543 aa17.88■□□□□ 0.45
TRIM47-202ENST00000585333 ATF3P18847 181 aa17.88■□□□□ 0.45
TRIM47-202ENST00000585333 CADPS2Q86UW7 1296 aa17.88■□□□□ 0.45
TRIM47-202ENST00000585333 CDK19Q9BWU1 502 aa17.88■□□□□ 0.45
TRIM47-202ENST00000585333 LRRC7Q96NW7 1537 aa17.88■□□□□ 0.45
TRIM47-202ENST00000585333 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-202ENST00000585333 STRCP1A6NGW2 1772 aa17.86■□□□□ 0.45
TRIM47-202ENST00000585333 CERKQ8TCT0 537 aa17.86■□□□□ 0.45
TRIM47-202ENST00000585333 WASHC2AQ641Q2 1341 aa17.86■□□□□ 0.45
TRIM47-202ENST00000585333 NALCNQ8IZF0 1738 aa17.85■□□□□ 0.45
TRIM47-202ENST00000585333 POLR3GLQ9BT43 218 aa17.85■□□□□ 0.45
TRIM47-202ENST00000585333 IQSEC2Q5JU85 1478 aa17.84■□□□□ 0.45
TRIM47-202ENST00000585333 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
TRIM47-202ENST00000585333 TERF2IPQ9NYB0 399 aa17.83■□□□□ 0.44
TRIM47-202ENST00000585333 ITSN1Q15811 1721 aa17.83■□□□□ 0.44
TRIM47-202ENST00000585333 LTBP4Q8N2S1 1624 aa17.83■□□□□ 0.44
TRIM47-202ENST00000585333 FMN2Q9NZ56 1722 aa17.82■□□□□ 0.44
TRIM47-202ENST00000585333 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
TRIM47-202ENST00000585333 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
TRIM47-202ENST00000585333 C11orf95C9JLR9 678 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-202ENST00000585333 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-202ENST00000585333 ATP7BP35670 1465 aa17.8■□□□□ 0.44
TRIM47-202ENST00000585333 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
TRIM47-202ENST00000585333 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-202ENST00000585333 PPIP5K1Q6PFW1 1433 aa17.78■□□□□ 0.44
TRIM47-202ENST00000585333 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
TRIM47-202ENST00000585333 BRD4O60885 1362 aaPredicted RBP17.77■□□□□ 0.43
TRIM47-202ENST00000585333 PLEKHG3A1L390 1219 aa17.76■□□□□ 0.43
TRIM47-202ENST00000585333 TOPAZ1Q8N9V7 1692 aa17.75■□□□□ 0.43
TRIM47-202ENST00000585333 RBM33Q96EV2 1170 aaKnown RBP17.75■□□□□ 0.43
TRIM47-202ENST00000585333 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
TRIM47-202ENST00000585333 KIF1AQ12756 1690 aa17.74■□□□□ 0.43
TRIM47-202ENST00000585333 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
TRIM47-202ENST00000585333 C1orf167Q5SNV9 1468 aa17.74■□□□□ 0.43
TRIM47-202ENST00000585333 MYOM1P52179 1685 aa17.74■□□□□ 0.43
TRIM47-202ENST00000585333 MST1RQ04912 1400 aa17.73■□□□□ 0.43
TRIM47-202ENST00000585333 TOM1O60784 492 aa17.73■□□□□ 0.43
TRIM47-202ENST00000585333 CABP1Q9NZU7 370 aa17.73■□□□□ 0.43
TRIM47-202ENST00000585333 KNSTRNQ9Y448 316 aa17.73■□□□□ 0.43
TRIM47-202ENST00000585333 NGDNQ8NEJ9 315 aaKnown RBP17.72■□□□□ 0.43
TRIM47-202ENST00000585333 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
TRIM47-202ENST00000585333 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
TRIM47-202ENST00000585333 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-202ENST00000585333 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
TRIM47-202ENST00000585333 SLC12A5Q9H2X9 1139 aa17.71■□□□□ 0.43
TRIM47-202ENST00000585333 PANK3Q9H999 370 aa17.71■□□□□ 0.43
TRIM47-202ENST00000585333 SLAIN2Q9P270 581 aa17.71■□□□□ 0.43
TRIM47-202ENST00000585333 USP32Q8NFA0 1604 aa17.71■□□□□ 0.43
TRIM47-202ENST00000585333 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
TRIM47-202ENST00000585333 NSD2O96028 1365 aa17.69■□□□□ 0.42
TRIM47-202ENST00000585333 KTN1Q86UP2 1357 aaKnown RBP17.69■□□□□ 0.42
TRIM47-202ENST00000585333 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
TRIM47-202ENST00000585333 EDC4Q6P2E9 1401 aaKnown RBP17.69■□□□□ 0.42
TRIM47-202ENST00000585333 CGNL1Q0VF96 1302 aa17.69■□□□□ 0.42
TRIM47-202ENST00000585333 ACEP12821 1306 aa17.68■□□□□ 0.42
TRIM47-202ENST00000585333 NPHP3Q7Z494 1330 aa17.68■□□□□ 0.42
TRIM47-202ENST00000585333 A0A1W2PP64 1363 aa17.67■□□□□ 0.42
TRIM47-202ENST00000585333 NPC1L1Q9UHC9 1359 aa17.67■□□□□ 0.42
TRIM47-202ENST00000585333 PSME1Q06323 249 aa17.67■□□□□ 0.42
TRIM47-202ENST00000585333 DIEXFQ68CQ4 756 aaKnown RBP17.67■□□□□ 0.42
TRIM47-202ENST00000585333 TTC21AQ8NDW8 1320 aa17.67■□□□□ 0.42
TRIM47-202ENST00000585333 USP6P35125 1406 aa17.65■□□□□ 0.42
TRIM47-202ENST00000585333 AKAP12Q02952 1782 aa17.65■□□□□ 0.42
TRIM47-202ENST00000585333 NSD3Q9BZ95 1437 aa17.64■□□□□ 0.42
TRIM47-202ENST00000585333 ANP32CO43423 234 aa17.64■□□□□ 0.41
TRIM47-202ENST00000585333 PMFBP1Q8TBY8 1022 aa17.64■□□□□ 0.41
TRIM47-202ENST00000585333 MON2Q7Z3U7 1717 aa17.64■□□□□ 0.41
TRIM47-202ENST00000585333 CD163L1Q9NR16 1453 aa17.63■□□□□ 0.41
TRIM47-202ENST00000585333 RGPD8O14715 1765 aaPredicted RBP17.63■□□□□ 0.41
TRIM47-202ENST00000585333 PER1O15534 1290 aaPredicted RBP17.62■□□□□ 0.41
TRIM47-202ENST00000585333 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
TRIM47-202ENST00000585333 ORAI2Q96SN7 254 aa17.62■□□□□ 0.41
TRIM47-202ENST00000585333 UBAP1LF5GYI3 381 aa17.6■□□□□ 0.41
TRIM47-202ENST00000585333 RALBP1Q15311 655 aa17.6■□□□□ 0.41
TRIM47-202ENST00000585333 SBNO1A3KN83 1393 aa17.59■□□□□ 0.41
TRIM47-202ENST00000585333 FOXO3O43524 673 aa17.59■□□□□ 0.41
TRIM47-202ENST00000585333 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms