RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 CDR1P51861 262 aa16.02■□□□□ 0.15
RAB11FIP4-210ENST00000585058 WASHC4Q2M389 1173 aa16.02■□□□□ 0.15
RAB11FIP4-210ENST00000585058 PDILTQ8N807 584 aa16.02■□□□□ 0.15
RAB11FIP4-210ENST00000585058 RUNDC1Q96C34 613 aa16.02■□□□□ 0.15
RAB11FIP4-210ENST00000585058 KDM4AO75164 1064 aa16.01■□□□□ 0.15
RAB11FIP4-210ENST00000585058 HMOX1P09601 288 aa16.01■□□□□ 0.15
RAB11FIP4-210ENST00000585058 HSP90AB4PQ58FF6 505 aa16.01■□□□□ 0.15
RAB11FIP4-210ENST00000585058 ACBD3Q9H3P7 528 aa16.01■□□□□ 0.15
RAB11FIP4-210ENST00000585058 PSME1Q06323 249 aa16■□□□□ 0.15
RAB11FIP4-210ENST00000585058 HSP90B2PQ58FF3 399 aa16■□□□□ 0.15
RAB11FIP4-210ENST00000585058 ODF2Q5BJF6 829 aa16■□□□□ 0.15
RAB11FIP4-210ENST00000585058 AIMP1Q12904 312 aaKnown RBP16■□□□□ 0.15
RAB11FIP4-210ENST00000585058 RNF214Q8ND24 703 aa16■□□□□ 0.15
RAB11FIP4-210ENST00000585058 OLFM4Q6UX06 510 aa16■□□□□ 0.15
RAB11FIP4-210ENST00000585058 PANK1Q8TE04 598 aa16■□□□□ 0.15
RAB11FIP4-210ENST00000585058 R3HCC1Q9Y3T6 440 aaKnown RBP15.99■□□□□ 0.15
RAB11FIP4-210ENST00000585058 GNAI1P63096 354 aa15.99■□□□□ 0.15
RAB11FIP4-210ENST00000585058 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
RAB11FIP4-210ENST00000585058 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.99■□□□□ 0.156e-6■■■■■ 48.1
RAB11FIP4-210ENST00000585058 MTMR7Q9Y216 660 aa15.99■□□□□ 0.15
RAB11FIP4-210ENST00000585058 CCDC27Q2M243 656 aa15.98■□□□□ 0.15
RAB11FIP4-210ENST00000585058 TTLL5Q6EMB2 1281 aa15.98■□□□□ 0.15
RAB11FIP4-210ENST00000585058 OFD1O75665 1012 aa15.98■□□□□ 0.15
RAB11FIP4-210ENST00000585058 EPS15P42566 896 aa15.98■□□□□ 0.15
RAB11FIP4-210ENST00000585058 NASPP49321 788 aaPredicted RBP15.98■□□□□ 0.15
RAB11FIP4-210ENST00000585058 SDF4Q9BRK5 362 aa15.98■□□□□ 0.15
RAB11FIP4-210ENST00000585058 NAT10Q9H0A0 1025 aaKnown RBP15.98■□□□□ 0.15
RAB11FIP4-210ENST00000585058 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
RAB11FIP4-210ENST00000585058 CDC45O75419 566 aa15.97■□□□□ 0.15
RAB11FIP4-210ENST00000585058 CAGE1Q8TC20 777 aa15.97■□□□□ 0.15
RAB11FIP4-210ENST00000585058 ZFYVE27Q5T4F4 411 aa15.97■□□□□ 0.15
RAB11FIP4-210ENST00000585058 RBM33Q96EV2 1170 aaKnown RBP15.97■□□□□ 0.15
RAB11FIP4-210ENST00000585058 CWC22Q9HCG8 908 aaKnown RBP15.97■□□□□ 0.15
RAB11FIP4-210ENST00000585058 KRI1Q8N9T8 703 aaKnown RBP15.97■□□□□ 0.15
RAB11FIP4-210ENST00000585058 JPH4Q96JJ6 628 aa15.97■□□□□ 0.15
RAB11FIP4-210ENST00000585058 CALRP27797 417 aaKnown RBP15.97■□□□□ 0.15
RAB11FIP4-210ENST00000585058 CCDC39Q9UFE4 941 aa15.97■□□□□ 0.15
RAB11FIP4-210ENST00000585058 BRMS1Q9HCU9 246 aa15.96■□□□□ 0.15
RAB11FIP4-210ENST00000585058 FGD5Q6ZNL6 1462 aa15.96■□□□□ 0.15
RAB11FIP4-210ENST00000585058 NOM1Q5C9Z4 860 aaKnown RBP15.96■□□□□ 0.14
RAB11FIP4-210ENST00000585058 UBTFL1P0CB47 393 aaPredicted RBP15.95■□□□□ 0.14
RAB11FIP4-210ENST00000585058 HSP90AB2PQ58FF8 381 aa15.95■□□□□ 0.14
RAB11FIP4-210ENST00000585058 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.95■□□□□ 0.14
RAB11FIP4-210ENST00000585058 NCAPD3P42695 1498 aa15.95■□□□□ 0.14
RAB11FIP4-210ENST00000585058 MRE11P49959 708 aa15.94■□□□□ 0.14
RAB11FIP4-210ENST00000585058 CCDC173Q0VFZ6 552 aa15.94■□□□□ 0.14
RAB11FIP4-210ENST00000585058 RAPGEF4Q8WZA2 1011 aa15.93■□□□□ 0.14
RAB11FIP4-210ENST00000585058 FSD1Q9BTV5 496 aa15.93■□□□□ 0.14
RAB11FIP4-210ENST00000585058 NINLQ9Y2I6 1382 aa15.93■□□□□ 0.14
RAB11FIP4-210ENST00000585058 TRIM5Q9C035 493 aa15.93■□□□□ 0.14
RAB11FIP4-210ENST00000585058 XBP1P17861 261 aa15.93■□□□□ 0.14
RAB11FIP4-210ENST00000585058 PSMA5P28066 241 aa15.93■□□□□ 0.14
RAB11FIP4-210ENST00000585058 CAVIN1Q6NZI2 390 aaKnown RBP15.92■□□□□ 0.14
RAB11FIP4-210ENST00000585058 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
RAB11FIP4-210ENST00000585058 CNTROBQ8N137 903 aa15.92■□□□□ 0.14
RAB11FIP4-210ENST00000585058 ATP2B1P20020 1258 aa15.92■□□□□ 0.14
RAB11FIP4-210ENST00000585058 SKIDA1Q1XH10 827 aa15.92■□□□□ 0.14
RAB11FIP4-210ENST00000585058 GGNBP2Q9H3C7 697 aa15.92■□□□□ 0.14
RAB11FIP4-210ENST00000585058 SMC2O95347 1197 aa15.92■□□□□ 0.14
RAB11FIP4-210ENST00000585058 MAP7D2Q96T17 732 aa15.91■□□□□ 0.14
RAB11FIP4-210ENST00000585058 FMNL2Q96PY5 1086 aa15.91■□□□□ 0.14
RAB11FIP4-210ENST00000585058 NUTM2GQ5VZR2 741 aa15.9■□□□□ 0.14
RAB11FIP4-210ENST00000585058 KLHL34Q8N239 644 aa15.9■□□□□ 0.14
RAB11FIP4-210ENST00000585058 H0YHG0 523 aa15.9■□□□□ 0.14
RAB11FIP4-210ENST00000585058 IKQ13123 557 aaPredicted RBP15.9■□□□□ 0.14
RAB11FIP4-210ENST00000585058 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
RAB11FIP4-210ENST00000585058 TRAK2O60296 914 aa15.9■□□□□ 0.14
RAB11FIP4-210ENST00000585058 DNAJC2Q99543 621 aaKnown RBP15.9■□□□□ 0.14
RAB11FIP4-210ENST00000585058 NLRP2Q9NX02 1062 aa15.89■□□□□ 0.13
RAB11FIP4-210ENST00000585058 KINO60870 393 aaKnown RBP15.89■□□□□ 0.13
RAB11FIP4-210ENST00000585058 BRPF1P55201 1214 aaPredicted RBP15.88■□□□□ 0.13
RAB11FIP4-210ENST00000585058 DCTN1Q14203 1278 aa15.88■□□□□ 0.13
RAB11FIP4-210ENST00000585058 ERCC4Q92889 916 aaPredicted RBP15.88■□□□□ 0.13
RAB11FIP4-210ENST00000585058 SURF6O75683 361 aaKnown RBP15.88■□□□□ 0.13
RAB11FIP4-210ENST00000585058 NEK4P51957 841 aa15.88■□□□□ 0.13
RAB11FIP4-210ENST00000585058 CLASRPQ8N2M8 674 aaKnown RBP15.88■□□□□ 0.13
RAB11FIP4-210ENST00000585058 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
RAB11FIP4-210ENST00000585058 PRPF40AO75400 957 aaKnown RBP15.88■□□□□ 0.13
RAB11FIP4-210ENST00000585058 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
RAB11FIP4-210ENST00000585058 KIF7Q2M1P5 1343 aa15.87■□□□□ 0.13
RAB11FIP4-210ENST00000585058 TSPY26PQ9H489 355 aa15.87■□□□□ 0.13
RAB11FIP4-210ENST00000585058 LETM1O95202 739 aaPredicted RBP15.87■□□□□ 0.13
RAB11FIP4-210ENST00000585058 CCDC191Q8NCU4 936 aa15.87■□□□□ 0.13
RAB11FIP4-210ENST00000585058 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
RAB11FIP4-210ENST00000585058 CEBPZQ03701 1054 aaKnown RBP15.86■□□□□ 0.13
RAB11FIP4-210ENST00000585058 AAMPQ13685 434 aa15.86■□□□□ 0.13
RAB11FIP4-210ENST00000585058 FAM177BA6PVY3 158 aa15.86■□□□□ 0.13
RAB11FIP4-210ENST00000585058 TBC1D2BQ9UPU7 963 aa15.86■□□□□ 0.13
RAB11FIP4-210ENST00000585058 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
RAB11FIP4-210ENST00000585058 FIBPO43427 364 aa15.85■□□□□ 0.13
RAB11FIP4-210ENST00000585058 CWC15Q9P013 229 aaKnown RBP15.85■□□□□ 0.13
RAB11FIP4-210ENST00000585058 MBD3O95983 291 aa15.85■□□□□ 0.13
RAB11FIP4-210ENST00000585058 FILIP1LQ4L180 1135 aa15.85■□□□□ 0.13
RAB11FIP4-210ENST00000585058 SMARCE1Q969G3 411 aa15.85■□□□□ 0.13
RAB11FIP4-210ENST00000585058 CDK5RAP3Q96JB5 506 aa15.85■□□□□ 0.13
RAB11FIP4-210ENST00000585058 MYO6Q9UM54 1294 aa15.85■□□□□ 0.13
RAB11FIP4-210ENST00000585058 MAGEC2Q9UBF1 373 aaPredicted RBP15.85■□□□□ 0.13
RAB11FIP4-210ENST00000585058 ADAMTS8Q9UP79 889 aa15.85■□□□□ 0.13
RAB11FIP4-210ENST00000585058 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
RAB11FIP4-210ENST00000585058 SPC24Q8NBT2 197 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms