RNA–Protein interactions for RNA: ENST00000584734.1

LINC01887-202, Transcript of long intergenic non-protein coding RNA 1887, humanhuman

TSL 3 BASIC

Gene LINC01887, Length 860 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01887-202ENST00000584734 LRPPRCP42704 1394 aaKnown RBP22.31■■□□□ 1.16
LINC01887-202ENST00000584734 RAB3GAP2Q9H2M9 1393 aa22.3■■□□□ 1.16
LINC01887-202ENST00000584734 ADAMTS2O95450 1211 aa22.3■■□□□ 1.16
LINC01887-202ENST00000584734 NUTM2FA1L443 756 aa22.29■■□□□ 1.16
LINC01887-202ENST00000584734 SOS2Q07890 1332 aaPredicted RBP22.29■■□□□ 1.16
LINC01887-202ENST00000584734 ABCC11Q96J66 1382 aa22.28■■□□□ 1.16
LINC01887-202ENST00000584734 NGLY1Q96IV0 654 aa22.28■■□□□ 1.16
LINC01887-202ENST00000584734 PIK3C2GO75747 1445 aa22.27■■□□□ 1.16
LINC01887-202ENST00000584734 NPHP3Q7Z494 1330 aa22.26■■□□□ 1.15
LINC01887-202ENST00000584734 FOXO3O43524 673 aa22.25■■□□□ 1.15
LINC01887-202ENST00000584734 C14orf93Q9H972 538 aaKnown RBP22.25■■□□□ 1.15
LINC01887-202ENST00000584734 TECPR2O15040 1411 aa22.24■■□□□ 1.15
LINC01887-202ENST00000584734 CFAP70Q5T0N1 1121 aa22.24■■□□□ 1.15
LINC01887-202ENST00000584734 QTRT2Q9H974 415 aaKnown RBP22.24■■□□□ 1.15
LINC01887-202ENST00000584734 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
LINC01887-202ENST00000584734 XPCQ01831 940 aaPredicted RBP22.23■■□□□ 1.15
LINC01887-202ENST00000584734 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
LINC01887-202ENST00000584734 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
LINC01887-202ENST00000584734 CDC42BPGQ6DT37 1551 aa22.22■■□□□ 1.15
LINC01887-202ENST00000584734 SIRT1Q96EB6 747 aa22.2■■□□□ 1.14
LINC01887-202ENST00000584734 IFT172Q9UG01 1749 aa22.2■■□□□ 1.14
LINC01887-202ENST00000584734 RBM6P78332 1123 aaKnown RBP22.19■■□□□ 1.14
LINC01887-202ENST00000584734 LAMC1P11047 1609 aa22.18■■□□□ 1.14
LINC01887-202ENST00000584734 SAFB2Q14151 953 aaKnown RBP eCLIP22.18■■□□□ 1.14
LINC01887-202ENST00000584734 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
LINC01887-202ENST00000584734 PRAM1Q96QH2 718 aa22.17■■□□□ 1.14
LINC01887-202ENST00000584734 POGKQ9P215 609 aa22.17■■□□□ 1.14
LINC01887-202ENST00000584734 USP21Q9UK80 565 aa22.17■■□□□ 1.14
LINC01887-202ENST00000584734 MYOM2P54296 1465 aa22.16■■□□□ 1.14
LINC01887-202ENST00000584734 UPF1Q92900 1129 aaKnown RBP eCLIP22.16■■□□□ 1.14
LINC01887-202ENST00000584734 CDK12Q9NYV4 1490 aaPredicted RBP22.15■■□□□ 1.14
LINC01887-202ENST00000584734 NRXN1Q9ULB1 1477 aa22.15■■□□□ 1.14
LINC01887-202ENST00000584734 DCAF11Q8TEB1 546 aa22.14■■□□□ 1.13
LINC01887-202ENST00000584734 HRCP23327 699 aa22.13■■□□□ 1.13
LINC01887-202ENST00000584734 PXDNQ92626 1479 aa22.13■■□□□ 1.13
LINC01887-202ENST00000584734 KRT28Q7Z3Y7 464 aa22.12■■□□□ 1.13
LINC01887-202ENST00000584734 TRPC5Q9UL62 973 aaPredicted RBP22.12■■□□□ 1.13
LINC01887-202ENST00000584734 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
LINC01887-202ENST00000584734 FNBP4Q8N3X1 1017 aaPredicted RBP22.11■■□□□ 1.13
LINC01887-202ENST00000584734 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
LINC01887-202ENST00000584734 TRAK1Q9UPV9 953 aa22.11■■□□□ 1.13
LINC01887-202ENST00000584734 PSME1Q06323 249 aa22.09■■□□□ 1.13
LINC01887-202ENST00000584734 HAP1P54257 671 aaPredicted RBP22.08■■□□□ 1.13
LINC01887-202ENST00000584734 SPATA31A3Q5VYP0 1347 aa22.07■■□□□ 1.12
LINC01887-202ENST00000584734 RGS12O14924 1447 aa22.07■■□□□ 1.12
LINC01887-202ENST00000584734 PLEKHG5O94827 1062 aa22.07■■□□□ 1.12
LINC01887-202ENST00000584734 STAC3Q96MF2 364 aa22.07■■□□□ 1.12
LINC01887-202ENST00000584734 LMOD2Q6P5Q4 547 aa22.06■■□□□ 1.12
LINC01887-202ENST00000584734 FMN2Q9NZ56 1722 aa22.06■■□□□ 1.12
LINC01887-202ENST00000584734 COL22A1Q8NFW1 1626 aaPredicted RBP22.06■■□□□ 1.12
LINC01887-202ENST00000584734 HIRIP3Q9BW71 556 aaPredicted RBP22.05■■□□□ 1.12
LINC01887-202ENST00000584734 MINK1Q8N4C8 1332 aaPredicted RBP22.04■■□□□ 1.12
LINC01887-202ENST00000584734 PMFBP1Q8TBY8 1022 aa22.03■■□□□ 1.12
LINC01887-202ENST00000584734 KIF1AQ12756 1690 aa22.01■■□□□ 1.11
LINC01887-202ENST00000584734 DLC1Q96QB1 1528 aa22.01■■□□□ 1.11
LINC01887-202ENST00000584734 ATRNO75882 1429 aa22■■□□□ 1.11
LINC01887-202ENST00000584734 ADGRB1O14514 1584 aa21.99■■□□□ 1.11
LINC01887-202ENST00000584734 CABLES1Q8TDN4 633 aa21.99■■□□□ 1.11
LINC01887-202ENST00000584734 TNS3Q68CZ2 1445 aa21.98■■□□□ 1.11
LINC01887-202ENST00000584734 ANKARQ7Z5J8 1434 aa21.98■■□□□ 1.11
LINC01887-202ENST00000584734 BCL9LQ86UU0 1499 aa21.98■■□□□ 1.11
LINC01887-202ENST00000584734 GJD4Q96KN9 370 aaPredicted RBP21.98■■□□□ 1.11
LINC01887-202ENST00000584734 EIF3AQ14152 1382 aaKnown RBP21.98■■□□□ 1.11
LINC01887-202ENST00000584734 ATAD2Q6PL18 1390 aa21.98■■□□□ 1.11
LINC01887-202ENST00000584734 UNC5CLQ8IV45 518 aa21.97■■□□□ 1.11
LINC01887-202ENST00000584734 SBNO1A3KN83 1393 aa21.97■■□□□ 1.11
LINC01887-202ENST00000584734 WASLO00401 505 aaPredicted RBP21.96■■□□□ 1.11
LINC01887-202ENST00000584734 ARHGEF10O15013 1369 aa21.96■■□□□ 1.11
LINC01887-202ENST00000584734 GPRASP1Q5JY77 1395 aa21.95■■□□□ 1.1
LINC01887-202ENST00000584734 NGDNQ8NEJ9 315 aaKnown RBP21.94■■□□□ 1.1
LINC01887-202ENST00000584734 PRR36Q9H6K5 1346 aa21.92■■□□□ 1.1
LINC01887-202ENST00000584734 CCDC9Q9Y3X0 531 aaKnown RBP21.92■■□□□ 1.1
LINC01887-202ENST00000584734 RGPD8O14715 1765 aaPredicted RBP21.92■■□□□ 1.1
LINC01887-202ENST00000584734 PAK3O75914 559 aaPredicted RBP21.91■■□□□ 1.1
LINC01887-202ENST00000584734 ADGRB2O60241 1585 aa21.91■■□□□ 1.1
LINC01887-202ENST00000584734 SLIT2O94813 1529 aa21.89■■□□□ 1.09
LINC01887-202ENST00000584734 TULP4Q9NRJ4 1543 aa21.88■■□□□ 1.09
LINC01887-202ENST00000584734 MARF1Q9Y4F3 1742 aaKnown RBP21.88■■□□□ 1.09
LINC01887-202ENST00000584734 USP32Q8NFA0 1604 aa21.88■■□□□ 1.09
LINC01887-202ENST00000584734 FAM83GA6ND36 823 aa21.87■■□□□ 1.09
LINC01887-202ENST00000584734 NUDT16Q96DE0 195 aaKnown RBP21.87■■□□□ 1.09
LINC01887-202ENST00000584734 RALGAPBQ86X10 1494 aa21.86■■□□□ 1.09
LINC01887-202ENST00000584734 VPS72Q15906 364 aa21.86■■□□□ 1.09
LINC01887-202ENST00000584734 CDK19Q9BWU1 502 aa21.86■■□□□ 1.09
LINC01887-202ENST00000584734 CCDC125Q86Z20 511 aa21.84■■□□□ 1.09
LINC01887-202ENST00000584734 NBPF1Q3BBV0 1214 aa21.83■■□□□ 1.09
LINC01887-202ENST00000584734 SEPT12Q8IYM1 358 aa21.83■■□□□ 1.09
LINC01887-202ENST00000584734 A0A0G2JS52 829 aa21.82■■□□□ 1.08
LINC01887-202ENST00000584734 MYT1Q01538 1121 aa21.82■■□□□ 1.08
LINC01887-202ENST00000584734 BTG4Q9NY30 223 aa21.81■■□□□ 1.08
LINC01887-202ENST00000584734 CCDC61Q9Y6R9 512 aa21.8■■□□□ 1.08
LINC01887-202ENST00000584734 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.79■■□□□ 1.08
LINC01887-202ENST00000584734 GLI3P10071 1580 aa21.78■■□□□ 1.08
LINC01887-202ENST00000584734 SRPK2P78362 688 aaKnown RBP21.77■■□□□ 1.08
LINC01887-202ENST00000584734 PRDM11Q9NQV5 511 aa21.77■■□□□ 1.08
LINC01887-202ENST00000584734 EP400Q96L91 3159 aa21.77■■□□□ 1.08
LINC01887-202ENST00000584734 ARHGEF28Q8N1W1 1705 aaKnown RBP21.77■■□□□ 1.08
LINC01887-202ENST00000584734 ATP7BP35670 1465 aa21.77■■□□□ 1.07
LINC01887-202ENST00000584734 ONECUT3O60422 494 aaPredicted RBP21.76■■□□□ 1.07
LINC01887-202ENST00000584734 NBPF8Q3BBV2 869 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms