RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 PRAG1Q86YV5 1406 aa12.88□□□□□ -0.35
SRSF1-207ENST00000584668 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
SRSF1-207ENST00000584668 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
SRSF1-207ENST00000584668 FNBP4Q8N3X1 1017 aaPredicted RBP12.87□□□□□ -0.35
SRSF1-207ENST00000584668 ITGAEP38570 1179 aa12.85□□□□□ -0.35
SRSF1-207ENST00000584668 MYOM2P54296 1465 aa12.85□□□□□ -0.35
SRSF1-207ENST00000584668 PPLO60437 1756 aa12.84□□□□□ -0.35
SRSF1-207ENST00000584668 KIF1AQ12756 1690 aa12.83□□□□□ -0.35
SRSF1-207ENST00000584668 SF3B2Q13435 895 aaKnown RBP12.83□□□□□ -0.36
SRSF1-207ENST00000584668 RPGRIP1LQ68CZ1 1315 aa12.83□□□□□ -0.36
SRSF1-207ENST00000584668 ROBO2Q9HCK4 1378 aa12.82□□□□□ -0.36
SRSF1-207ENST00000584668 BLMP54132 1417 aaPredicted RBP12.82□□□□□ -0.36
SRSF1-207ENST00000584668 ORAI2Q96SN7 254 aa12.82□□□□□ -0.36
SRSF1-207ENST00000584668 PXDNQ92626 1479 aa12.81□□□□□ -0.36
SRSF1-207ENST00000584668 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
SRSF1-207ENST00000584668 GJD4Q96KN9 370 aaPredicted RBP12.8□□□□□ -0.36
SRSF1-207ENST00000584668 LRP5O75197 1615 aa12.8□□□□□ -0.36
SRSF1-207ENST00000584668 KNDC1Q76NI1 1749 aa12.79□□□□□ -0.36
SRSF1-207ENST00000584668 BCL9LQ86UU0 1499 aa12.79□□□□□ -0.36
SRSF1-207ENST00000584668 USP32Q8NFA0 1604 aa12.79□□□□□ -0.36
SRSF1-207ENST00000584668 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
SRSF1-207ENST00000584668 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
SRSF1-207ENST00000584668 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
SRSF1-207ENST00000584668 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.37
SRSF1-207ENST00000584668 RALGAPBQ86X10 1494 aa12.77□□□□□ -0.37
SRSF1-207ENST00000584668 BRWD3Q6RI45 1802 aa12.76□□□□□ -0.37
SRSF1-207ENST00000584668 NAIPQ13075 1403 aa12.76□□□□□ -0.37
SRSF1-207ENST00000584668 GLI3P10071 1580 aa12.76□□□□□ -0.37
SRSF1-207ENST00000584668 PLCH1Q4KWH8 1693 aa12.76□□□□□ -0.37
SRSF1-207ENST00000584668 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
SRSF1-207ENST00000584668 FOXO3O43524 673 aa12.75□□□□□ -0.37
SRSF1-207ENST00000584668 SLIT2O94813 1529 aa12.75□□□□□ -0.37
SRSF1-207ENST00000584668 IFT172Q9UG01 1749 aa12.75□□□□□ -0.37
SRSF1-207ENST00000584668 TECPR2O15040 1411 aa12.74□□□□□ -0.37
SRSF1-207ENST00000584668 RRBP1Q9P2E9 1410 aaKnown RBP12.73□□□□□ -0.37
SRSF1-207ENST00000584668 XPCQ01831 940 aaPredicted RBP12.73□□□□□ -0.37
SRSF1-207ENST00000584668 PSME1Q06323 249 aa12.72□□□□□ -0.37
SRSF1-207ENST00000584668 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
SRSF1-207ENST00000584668 TNS3Q68CZ2 1445 aa12.71□□□□□ -0.37
SRSF1-207ENST00000584668 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.37
SRSF1-207ENST00000584668 ABCA3Q99758 1704 aa12.71□□□□□ -0.37
SRSF1-207ENST00000584668 ANKRD30BQ9BXX2 1392 aa12.71□□□□□ -0.37
SRSF1-207ENST00000584668 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.37
SRSF1-207ENST00000584668 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
SRSF1-207ENST00000584668 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
SRSF1-207ENST00000584668 A0A0G2JS52 829 aa12.7□□□□□ -0.38
SRSF1-207ENST00000584668 BAG6P46379 1132 aa12.7□□□□□ -0.38
SRSF1-207ENST00000584668 MYT1Q01538 1121 aa12.7□□□□□ -0.38
SRSF1-207ENST00000584668 VPS72Q15906 364 aa12.69□□□□□ -0.38
SRSF1-207ENST00000584668 KRT27Q7Z3Y8 459 aa12.69□□□□□ -0.38
SRSF1-207ENST00000584668 SEPT12Q8IYM1 358 aa12.69□□□□□ -0.38
SRSF1-207ENST00000584668 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
SRSF1-207ENST00000584668 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
SRSF1-207ENST00000584668 DEFB132Q7Z7B7 95 aa12.68□□□□□ -0.38
SRSF1-207ENST00000584668 STK26Q9P289 416 aa12.68□□□□□ -0.38
SRSF1-207ENST00000584668 RGPD8O14715 1765 aaPredicted RBP12.68□□□□□ -0.38
SRSF1-207ENST00000584668 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
SRSF1-207ENST00000584668 ADGRB2O60241 1585 aa12.67□□□□□ -0.38
SRSF1-207ENST00000584668 SBNO1A3KN83 1393 aa12.67□□□□□ -0.38
SRSF1-207ENST00000584668 PIK3C2GO75747 1445 aa12.66□□□□□ -0.38
SRSF1-207ENST00000584668 YTHDC2Q9H6S0 1430 aaKnown RBP12.65□□□□□ -0.38
SRSF1-207ENST00000584668 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
SRSF1-207ENST00000584668 WAPLQ7Z5K2 1190 aa12.65□□□□□ -0.38
SRSF1-207ENST00000584668 COL14A1Q05707 1796 aaKnown RBP12.65□□□□□ -0.38
SRSF1-207ENST00000584668 NRAPQ86VF7 1730 aa12.65□□□□□ -0.38
SRSF1-207ENST00000584668 NRXN1Q9ULB1 1477 aa12.65□□□□□ -0.38
SRSF1-207ENST00000584668 PHF8Q9UPP1 1060 aa12.64□□□□□ -0.39
SRSF1-207ENST00000584668 EIF3AQ14152 1382 aaKnown RBP12.64□□□□□ -0.39
SRSF1-207ENST00000584668 ADGRF5Q8IZF2 1346 aa12.63□□□□□ -0.39
SRSF1-207ENST00000584668 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
SRSF1-207ENST00000584668 ANKARQ7Z5J8 1434 aa12.62□□□□□ -0.39
SRSF1-207ENST00000584668 DHX57Q6P158 1386 aaKnown RBP12.62□□□□□ -0.39
SRSF1-207ENST00000584668 PLEKHH1Q9ULM0 1364 aa12.62□□□□□ -0.39
SRSF1-207ENST00000584668 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
SRSF1-207ENST00000584668 SIRT1Q96EB6 747 aa12.62□□□□□ -0.39
SRSF1-207ENST00000584668 SPATA31E1Q6ZUB1 1445 aa12.62□□□□□ -0.39
SRSF1-207ENST00000584668 TNS1Q9HBL0 1735 aaKnown RBP12.6□□□□□ -0.39
SRSF1-207ENST00000584668 GPRASP1Q5JY77 1395 aa12.6□□□□□ -0.39
SRSF1-207ENST00000584668 PSDA5PKW4 1024 aaPredicted RBP12.6□□□□□ -0.39
SRSF1-207ENST00000584668 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
SRSF1-207ENST00000584668 HRCP23327 699 aa12.6□□□□□ -0.39
SRSF1-207ENST00000584668 TMEM132EQ6IEE7 984 aa12.6□□□□□ -0.39
SRSF1-207ENST00000584668 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
SRSF1-207ENST00000584668 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
SRSF1-207ENST00000584668 PPARGC1BQ86YN6 1023 aaKnown RBP12.59□□□□□ -0.39
SRSF1-207ENST00000584668 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
SRSF1-207ENST00000584668 DISP2A7MBM2 1401 aa12.59□□□□□ -0.39
SRSF1-207ENST00000584668 ITSN1Q15811 1721 aa12.59□□□□□ -0.39
SRSF1-207ENST00000584668 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
SRSF1-207ENST00000584668 DLC1Q96QB1 1528 aa12.58□□□□□ -0.4
SRSF1-207ENST00000584668 ALS2Q96Q42 1657 aa12.58□□□□□ -0.4
SRSF1-207ENST00000584668 BTG4Q9NY30 223 aa12.58□□□□□ -0.4
SRSF1-207ENST00000584668 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
SRSF1-207ENST00000584668 PARD3Q8TEW0 1356 aa12.57□□□□□ -0.4
SRSF1-207ENST00000584668 POGKQ9P215 609 aa12.57□□□□□ -0.4
SRSF1-207ENST00000584668 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
SRSF1-207ENST00000584668 DCAF8L1A6NGE4 600 aa12.55□□□□□ -0.4
SRSF1-207ENST00000584668 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-207ENST00000584668 PRAM1Q96QH2 718 aa12.55□□□□□ -0.4
SRSF1-207ENST00000584668 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms