RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 GRIPAP1Q4V328 841 aa10.04□□□□□ -0.8
TTC39C-210ENST00000584424 MSS51Q4VC12 460 aa10.03□□□□□ -0.8
TTC39C-210ENST00000584424 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
TTC39C-210ENST00000584424 TRIM32Q13049 653 aa10.02□□□□□ -0.81
TTC39C-210ENST00000584424 SNIP1Q8TAD8 396 aaKnown RBP10.02□□□□□ -0.81
TTC39C-210ENST00000584424 WNT7AO00755 349 aa10.01□□□□□ -0.81
TTC39C-210ENST00000584424 SMPD1P17405 629 aa10.01□□□□□ -0.81
TTC39C-210ENST00000584424 J3QL48 77 aa10□□□□□ -0.81
TTC39C-210ENST00000584424 Q3C1V9 767 aa10□□□□□ -0.81
TTC39C-210ENST00000584424 MRGPRX2Q96LB1 330 aa10□□□□□ -0.81
TTC39C-210ENST00000584424 NFX1Q12986 1120 aaKnown RBP9.99□□□□□ -0.81
TTC39C-210ENST00000584424 GPIHBP1Q8IV16 184 aa9.99□□□□□ -0.81
TTC39C-210ENST00000584424 CCDC24Q8N4L8 307 aa9.99□□□□□ -0.81
TTC39C-210ENST00000584424 ATP13A2Q9NQ11 1180 aa9.99□□□□□ -0.81
TTC39C-210ENST00000584424 SNRPBP14678 240 aaKnown RBP9.98□□□□□ -0.81
TTC39C-210ENST00000584424 MMP16P51512 607 aa9.95□□□□□ -0.82
TTC39C-210ENST00000584424 HPS1Q92902 700 aa9.95□□□□□ -0.82
TTC39C-210ENST00000584424 USB1Q9BQ65 265 aaKnown RBP9.95□□□□□ -0.82
TTC39C-210ENST00000584424 KDM4AO75164 1064 aa9.93□□□□□ -0.82
TTC39C-210ENST00000584424 CD46P15529 392 aa9.93□□□□□ -0.82
TTC39C-210ENST00000584424 HLA-CQ95604 372 aa9.93□□□□□ -0.82
TTC39C-210ENST00000584424 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
TTC39C-210ENST00000584424 INSM1Q01101 510 aaPredicted RBP9.92□□□□□ -0.82
TTC39C-210ENST00000584424 TRIM47Q96LD4 638 aa9.92□□□□□ -0.82
TTC39C-210ENST00000584424 REPIN1Q9BWE0 567 aaKnown RBP9.92□□□□□ -0.82
TTC39C-210ENST00000584424 STK17AQ9UEE5 414 aa9.92□□□□□ -0.82
TTC39C-210ENST00000584424 TERTO14746 1132 aaKnown RBP9.91□□□□□ -0.82
TTC39C-210ENST00000584424 DXOO77932 396 aaKnown RBP9.91□□□□□ -0.82
TTC39C-210ENST00000584424 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
TTC39C-210ENST00000584424 WIPF1O43516 503 aa9.9□□□□□ -0.82
TTC39C-210ENST00000584424 ALDH1A1P00352 501 aa9.89□□□□□ -0.83
TTC39C-210ENST00000584424 SKOR1P84550 965 aa9.89□□□□□ -0.83
TTC39C-210ENST00000584424 MDM2Q00987 491 aaPredicted RBP9.89□□□□□ -0.83
TTC39C-210ENST00000584424 LCE2CQ5TA81 110 aa9.88□□□□□ -0.83
TTC39C-210ENST00000584424 GUCA2AQ02747 115 aa9.87□□□□□ -0.83
TTC39C-210ENST00000584424 KIFC2Q96AC6 838 aa9.87□□□□□ -0.83
TTC39C-210ENST00000584424 WNT7BP56706 349 aa9.86□□□□□ -0.83
TTC39C-210ENST00000584424 MAP2K5Q13163 448 aa9.85□□□□□ -0.83
TTC39C-210ENST00000584424 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
TTC39C-210ENST00000584424 HOXA2O43364 376 aa9.84□□□□□ -0.83
TTC39C-210ENST00000584424 USP46P62068 366 aa9.84□□□□□ -0.83
TTC39C-210ENST00000584424 PLCB2Q00722 1185 aa9.83□□□□□ -0.84
TTC39C-210ENST00000584424 IRF6O14896 467 aa9.82□□□□□ -0.84
TTC39C-210ENST00000584424 JUNDP17535 347 aa9.82□□□□□ -0.84
TTC39C-210ENST00000584424 EHBP1Q8NDI1 1231 aa9.82□□□□□ -0.84
TTC39C-210ENST00000584424 BMP1P13497 986 aa9.81□□□□□ -0.84
TTC39C-210ENST00000584424 SLC16A10Q8TF71 515 aa9.81□□□□□ -0.84
TTC39C-210ENST00000584424 NUDT12Q9BQG2 462 aa9.8□□□□□ -0.84
TTC39C-210ENST00000584424 WASF2Q9Y6W5 498 aa9.8□□□□□ -0.84
TTC39C-210ENST00000584424 PTCRAQ6ISU1 281 aaPredicted RBP9.79□□□□□ -0.84
TTC39C-210ENST00000584424 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
TTC39C-210ENST00000584424 CAPN5O15484 640 aaPredicted RBP9.78□□□□□ -0.84
TTC39C-210ENST00000584424 NXF1Q9UBU9 619 aaKnown RBP9.78□□□□□ -0.84
TTC39C-210ENST00000584424 VEGFBP49765 207 aa9.77□□□□□ -0.85
TTC39C-210ENST00000584424 HAP1P54257 671 aaPredicted RBP9.77□□□□□ -0.85
TTC39C-210ENST00000584424 KRI1Q8N9T8 703 aaKnown RBP9.77□□□□□ -0.85
TTC39C-210ENST00000584424 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.85
TTC39C-210ENST00000584424 TULP1O00294 542 aaPredicted RBP9.76□□□□□ -0.85
TTC39C-210ENST00000584424 SIAH2O43255 324 aa9.76□□□□□ -0.85
TTC39C-210ENST00000584424 TRIM46Q7Z4K8 759 aa9.76□□□□□ -0.85
TTC39C-210ENST00000584424 RETREG3Q86VR2 466 aa9.76□□□□□ -0.85
TTC39C-210ENST00000584424 CCDC102AQ96A19 550 aa9.76□□□□□ -0.85
TTC39C-210ENST00000584424 C6orf229H3BNL8 230 aa9.75□□□□□ -0.85
TTC39C-210ENST00000584424 GPCPD1Q9NPB8 672 aa9.75□□□□□ -0.85
TTC39C-210ENST00000584424 GMPRP36959 345 aa9.74□□□□□ -0.85
TTC39C-210ENST00000584424 FAM217BQ9NTX9 383 aaPredicted RBP9.74□□□□□ -0.85
TTC39C-210ENST00000584424 FAM181BA6NEQ2 426 aa9.73□□□□□ -0.85
TTC39C-210ENST00000584424 CLCN1P35523 988 aa9.73□□□□□ -0.85
TTC39C-210ENST00000584424 SH3BP2P78314 561 aa9.73□□□□□ -0.85
TTC39C-210ENST00000584424 LINC01559Q495D7 138 aa9.73□□□□□ -0.85
TTC39C-210ENST00000584424 FDX1P10109 184 aa9.72□□□□□ -0.85
TTC39C-210ENST00000584424 MS4A1P11836 297 aa9.72□□□□□ -0.85
TTC39C-210ENST00000584424 IRF7Q92985 503 aa9.72□□□□□ -0.85
TTC39C-210ENST00000584424 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
TTC39C-210ENST00000584424 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
TTC39C-210ENST00000584424 ZSCAN1Q8NBB4 408 aa9.7□□□□□ -0.86
TTC39C-210ENST00000584424 KDM2AQ9Y2K7 1162 aa9.7□□□□□ -0.86
TTC39C-210ENST00000584424 TLL2Q9Y6L7 1015 aa9.7□□□□□ -0.86
TTC39C-210ENST00000584424 BAP1Q92560 729 aa9.69□□□□□ -0.86
TTC39C-210ENST00000584424 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
TTC39C-210ENST00000584424 UNC93B1Q9H1C4 597 aa9.69□□□□□ -0.86
TTC39C-210ENST00000584424 NDUFV2P19404 249 aa9.66□□□□□ -0.86
TTC39C-210ENST00000584424 NPAS3Q8IXF0 933 aa9.66□□□□□ -0.86
TTC39C-210ENST00000584424 ERBB4Q15303 1308 aa9.65□□□□□ -0.86
TTC39C-210ENST00000584424 H3BM21 787 aa9.65□□□□□ -0.86
TTC39C-210ENST00000584424 PTPRNQ16849 979 aa9.65□□□□□ -0.86
TTC39C-210ENST00000584424 EVA1BQ9NVM1 165 aa9.65□□□□□ -0.86
TTC39C-210ENST00000584424 SSTR3P32745 418 aaPredicted RBP9.64□□□□□ -0.87
TTC39C-210ENST00000584424 NNTQ13423 1086 aa9.64□□□□□ -0.87
TTC39C-210ENST00000584424 PRR7Q8TB68 274 aa9.64□□□□□ -0.87
TTC39C-210ENST00000584424 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
TTC39C-210ENST00000584424 PURBQ96QR8 312 aaKnown RBP9.64□□□□□ -0.87
TTC39C-210ENST00000584424 PLEKHG3A1L390 1219 aa9.63□□□□□ -0.87
TTC39C-210ENST00000584424 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
TTC39C-210ENST00000584424 KCNH2Q12809 1159 aa9.63□□□□□ -0.87
TTC39C-210ENST00000584424 ZNF511Q8NB15 262 aa9.63□□□□□ -0.87
TTC39C-210ENST00000584424 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
TTC39C-210ENST00000584424 SOBPA7XYQ1 873 aa9.62□□□□□ -0.87
TTC39C-210ENST00000584424 VARSP26640 1264 aaKnown RBP9.62□□□□□ -0.87
TTC39C-210ENST00000584424 SCARF1Q14162 830 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms