RNA–Protein interactions for RNA: ENST00000584099.1

ERBB2-217, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-217ENST00000584099 CDC42BPGQ6DT37 1551 aa19.11■□□□□ 0.65
ERBB2-217ENST00000584099 PNPLA6Q8IY17 1366 aa19.09■□□□□ 0.65
ERBB2-217ENST00000584099 YTHDC2Q9H6S0 1430 aaKnown RBP19.08■□□□□ 0.65
ERBB2-217ENST00000584099 IFT172Q9UG01 1749 aa19.08■□□□□ 0.65
ERBB2-217ENST00000584099 NPHP3Q7Z494 1330 aa19.08■□□□□ 0.65
ERBB2-217ENST00000584099 ORAI2Q96SN7 254 aa19.08■□□□□ 0.64
ERBB2-217ENST00000584099 DHX57Q6P158 1386 aaKnown RBP19.07■□□□□ 0.64
ERBB2-217ENST00000584099 TMEM132EQ6IEE7 984 aa19.05■□□□□ 0.64
ERBB2-217ENST00000584099 STK26Q9P289 416 aa19.05■□□□□ 0.64
ERBB2-217ENST00000584099 WAPLQ7Z5K2 1190 aa19.04■□□□□ 0.64
ERBB2-217ENST00000584099 KNDC1Q76NI1 1749 aa19.03■□□□□ 0.64
ERBB2-217ENST00000584099 NUTM2BA6NNL0 878 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-217ENST00000584099 NUTM2EB1AL46 878 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-217ENST00000584099 ESCO1Q5FWF5 840 aa19.03■□□□□ 0.64
ERBB2-217ENST00000584099 NUTM2AQ8IVF1 878 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-217ENST00000584099 DDX17Q92841 729 aaKnown RBP19.03■□□□□ 0.64
ERBB2-217ENST00000584099 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-217ENST00000584099 RXRBP28702 533 aa19.01■□□□□ 0.63
ERBB2-217ENST00000584099 CFAP70Q5T0N1 1121 aa19.01■□□□□ 0.63
ERBB2-217ENST00000584099 DLC1Q96QB1 1528 aa19■□□□□ 0.63
ERBB2-217ENST00000584099 AFF2P51816 1311 aa19■□□□□ 0.63
ERBB2-217ENST00000584099 PLEKHH1Q9ULM0 1364 aa18.99■□□□□ 0.63
ERBB2-217ENST00000584099 PXDNQ92626 1479 aa18.97■□□□□ 0.63
ERBB2-217ENST00000584099 FOXO3O43524 673 aa18.97■□□□□ 0.63
ERBB2-217ENST00000584099 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
ERBB2-217ENST00000584099 C8orf37Q96NL8 207 aa18.96■□□□□ 0.63
ERBB2-217ENST00000584099 RBM6P78332 1123 aaKnown RBP18.95■□□□□ 0.62
ERBB2-217ENST00000584099 NGLY1Q96IV0 654 aa18.95■□□□□ 0.62
ERBB2-217ENST00000584099 PRAM1Q96QH2 718 aa18.95■□□□□ 0.62
ERBB2-217ENST00000584099 ADGRB1O14514 1584 aa18.94■□□□□ 0.62
ERBB2-217ENST00000584099 ANKARQ7Z5J8 1434 aa18.94■□□□□ 0.62
ERBB2-217ENST00000584099 COL22A1Q8NFW1 1626 aaPredicted RBP18.94■□□□□ 0.62
ERBB2-217ENST00000584099 DCAF11Q8TEB1 546 aa18.94■□□□□ 0.62
ERBB2-217ENST00000584099 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
ERBB2-217ENST00000584099 POGKQ9P215 609 aa18.93■□□□□ 0.62
ERBB2-217ENST00000584099 ADAMTS2O95450 1211 aa18.92■□□□□ 0.62
ERBB2-217ENST00000584099 PSME1Q06323 249 aa18.92■□□□□ 0.62
ERBB2-217ENST00000584099 QTRT2Q9H974 415 aaKnown RBP18.92■□□□□ 0.62
ERBB2-217ENST00000584099 PHF8Q9UPP1 1060 aa18.91■□□□□ 0.62
ERBB2-217ENST00000584099 SPATA31A3Q5VYP0 1347 aa18.91■□□□□ 0.62
ERBB2-217ENST00000584099 KIF1AQ12756 1690 aa18.91■□□□□ 0.62
ERBB2-217ENST00000584099 FMN2Q9NZ56 1722 aa18.91■□□□□ 0.62
ERBB2-217ENST00000584099 TRPC5Q9UL62 973 aaPredicted RBP18.9■□□□□ 0.62
ERBB2-217ENST00000584099 NUTM2FA1L443 756 aa18.89■□□□□ 0.61
ERBB2-217ENST00000584099 USP21Q9UK80 565 aa18.89■□□□□ 0.61
ERBB2-217ENST00000584099 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
ERBB2-217ENST00000584099 ADGRB2O60241 1585 aa18.89■□□□□ 0.61
ERBB2-217ENST00000584099 KRT28Q7Z3Y7 464 aa18.88■□□□□ 0.61
ERBB2-217ENST00000584099 KDM2AQ9Y2K7 1162 aa18.87■□□□□ 0.61
ERBB2-217ENST00000584099 TRAK1Q9UPV9 953 aa18.86■□□□□ 0.61
ERBB2-217ENST00000584099 ARHGEF10O15013 1369 aa18.85■□□□□ 0.61
ERBB2-217ENST00000584099 UPF1Q92900 1129 aaKnown RBP eCLIP18.85■□□□□ 0.61
ERBB2-217ENST00000584099 TNS3Q68CZ2 1445 aa18.84■□□□□ 0.61
ERBB2-217ENST00000584099 WASLO00401 505 aaPredicted RBP18.84■□□□□ 0.61
ERBB2-217ENST00000584099 XPCQ01831 940 aaPredicted RBP18.84■□□□□ 0.61
ERBB2-217ENST00000584099 ATRNO75882 1429 aa18.83■□□□□ 0.61
ERBB2-217ENST00000584099 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.6
ERBB2-217ENST00000584099 RGS12O14924 1447 aa18.83■□□□□ 0.6
ERBB2-217ENST00000584099 BCL9LQ86UU0 1499 aa18.82■□□□□ 0.6
ERBB2-217ENST00000584099 TULP4Q9NRJ4 1543 aa18.8■□□□□ 0.6
ERBB2-217ENST00000584099 GPRASP1Q5JY77 1395 aa18.8■□□□□ 0.6
ERBB2-217ENST00000584099 SLIT2O94813 1529 aa18.79■□□□□ 0.6
ERBB2-217ENST00000584099 MINK1Q8N4C8 1332 aaPredicted RBP18.78■□□□□ 0.6
ERBB2-217ENST00000584099 UNC5CLQ8IV45 518 aa18.78■□□□□ 0.6
ERBB2-217ENST00000584099 GJD4Q96KN9 370 aaPredicted RBP18.77■□□□□ 0.6
ERBB2-217ENST00000584099 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
ERBB2-217ENST00000584099 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
ERBB2-217ENST00000584099 PRR36Q9H6K5 1346 aa18.75■□□□□ 0.59
ERBB2-217ENST00000584099 KIAA1210Q9ULL0 1709 aa18.75■□□□□ 0.59
ERBB2-217ENST00000584099 HAP1P54257 671 aaPredicted RBP18.75■□□□□ 0.59
ERBB2-217ENST00000584099 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
ERBB2-217ENST00000584099 USP32Q8NFA0 1604 aa18.74■□□□□ 0.59
ERBB2-217ENST00000584099 CCDC125Q86Z20 511 aa18.73■□□□□ 0.59
ERBB2-217ENST00000584099 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
ERBB2-217ENST00000584099 VPS72Q15906 364 aa18.72■□□□□ 0.59
ERBB2-217ENST00000584099 NUDT16Q96DE0 195 aaKnown RBP18.72■□□□□ 0.59
ERBB2-217ENST00000584099 CCDC61Q9Y6R9 512 aa18.72■□□□□ 0.59
ERBB2-217ENST00000584099 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.71■□□□□ 0.59
ERBB2-217ENST00000584099 ATP7BP35670 1465 aa18.71■□□□□ 0.59
ERBB2-217ENST00000584099 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
ERBB2-217ENST00000584099 MARF1Q9Y4F3 1742 aaKnown RBP18.7■□□□□ 0.58
ERBB2-217ENST00000584099 POLR3AO14802 1390 aaPredicted RBP18.69■□□□□ 0.58
ERBB2-217ENST00000584099 PLEKHG3A1L390 1219 aa18.69■□□□□ 0.58
ERBB2-217ENST00000584099 ONECUT3O60422 494 aaPredicted RBP18.69■□□□□ 0.58
ERBB2-217ENST00000584099 CDK19Q9BWU1 502 aa18.69■□□□□ 0.58
ERBB2-217ENST00000584099 ARHGEF28Q8N1W1 1705 aaKnown RBP18.69■□□□□ 0.58
ERBB2-217ENST00000584099 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
ERBB2-217ENST00000584099 CABLES1Q8TDN4 633 aa18.68■□□□□ 0.58
ERBB2-217ENST00000584099 RALGAPBQ86X10 1494 aa18.68■□□□□ 0.58
ERBB2-217ENST00000584099 L3MBTL2Q969R5 705 aa18.67■□□□□ 0.58
ERBB2-217ENST00000584099 CENPJQ9HC77 1338 aaPredicted RBP18.67■□□□□ 0.58
ERBB2-217ENST00000584099 BRD4O60885 1362 aaPredicted RBP18.67■□□□□ 0.58
ERBB2-217ENST00000584099 RGPD8O14715 1765 aaPredicted RBP18.66■□□□□ 0.58
ERBB2-217ENST00000584099 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
ERBB2-217ENST00000584099 TRPM3Q9HCF6 1732 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-217ENST00000584099 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
ERBB2-217ENST00000584099 NBPF8Q3BBV2 869 aa18.63■□□□□ 0.57
ERBB2-217ENST00000584099 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
ERBB2-217ENST00000584099 PAK3O75914 559 aaPredicted RBP18.62■□□□□ 0.57
ERBB2-217ENST00000584099 ACEP12821 1306 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 524.1 ms