RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 TMEM2Q9UHN6 1383 aa8.39□□□□□ -1.07
VAPA-207ENST00000583879 LOC105371045A0A1W2PR82 267 aa8.39□□□□□ -1.07
VAPA-207ENST00000583879 PSEN1P49768 467 aa8.39□□□□□ -1.07
VAPA-207ENST00000583879 PROSER2Q86WR7 435 aaPredicted RBP8.39□□□□□ -1.07
VAPA-207ENST00000583879 EMP3P54852 163 aa8.38□□□□□ -1.07
VAPA-207ENST00000583879 POTEAQ6S8J7 498 aa8.38□□□□□ -1.07
VAPA-207ENST00000583879 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
VAPA-207ENST00000583879 RNF17Q9BXT8 1623 aaKnown RBP8.38□□□□□ -1.07
VAPA-207ENST00000583879 MAST1Q9Y2H9 1570 aa8.38□□□□□ -1.07
VAPA-207ENST00000583879 SLIT1O75093 1534 aa8.38□□□□□ -1.07
VAPA-207ENST00000583879 VPS8Q8N3P4 1428 aa8.37□□□□□ -1.07
VAPA-207ENST00000583879 TMEM94Q12767 1356 aa8.37□□□□□ -1.07
VAPA-207ENST00000583879 KIF15Q9NS87 1388 aa8.37□□□□□ -1.07
VAPA-207ENST00000583879 RBM33Q96EV2 1170 aaKnown RBP8.37□□□□□ -1.07
VAPA-207ENST00000583879 DUOX2Q9NRD8 1548 aa8.37□□□□□ -1.07
VAPA-207ENST00000583879 STRCP1A6NGW2 1772 aa8.37□□□□□ -1.07
VAPA-207ENST00000583879 SYNMO15061 1565 aa8.36□□□□□ -1.07
VAPA-207ENST00000583879 ZC3H13Q5T200 1668 aaKnown RBP8.36□□□□□ -1.07
VAPA-207ENST00000583879 ABCC5O15440 1437 aa8.36□□□□□ -1.07
VAPA-207ENST00000583879 MROH1Q8NDA8 1641 aa8.36□□□□□ -1.07
VAPA-207ENST00000583879 EIF2AK4Q9P2K8 1649 aaKnown RBP8.36□□□□□ -1.07
VAPA-207ENST00000583879 KANK1Q14678 1352 aa8.35□□□□□ -1.07
VAPA-207ENST00000583879 MAP3K1Q13233 1512 aa8.35□□□□□ -1.07
VAPA-207ENST00000583879 BCANQ96GW7 911 aa8.35□□□□□ -1.07
VAPA-207ENST00000583879 SLC52A1Q9NWF4 448 aa8.35□□□□□ -1.07
VAPA-207ENST00000583879 SLAIN2Q9P270 581 aa8.35□□□□□ -1.07
VAPA-207ENST00000583879 ERBINQ96RT1 1412 aa8.35□□□□□ -1.07
VAPA-207ENST00000583879 UBR1Q8IWV7 1749 aa8.34□□□□□ -1.07
VAPA-207ENST00000583879 HDGFP51858 240 aaKnown RBP8.34□□□□□ -1.07
VAPA-207ENST00000583879 PDAP1Q13442 181 aaKnown RBP8.34□□□□□ -1.07
VAPA-207ENST00000583879 CHIC2Q9UKJ5 165 aa8.34□□□□□ -1.07
VAPA-207ENST00000583879 G3V3G9 751 aa8.33□□□□□ -1.08
VAPA-207ENST00000583879 ANKRD30AQ9BXX3 1397 aa8.33□□□□□ -1.08
VAPA-207ENST00000583879 HS3ST6Q96QI5 342 aa8.32□□□□□ -1.08
VAPA-207ENST00000583879 TET3O43151 1660 aa8.32□□□□□ -1.08
VAPA-207ENST00000583879 PRDM15P57071 1507 aaPredicted RBP8.32□□□□□ -1.08
VAPA-207ENST00000583879 MSH6P52701 1360 aa8.32□□□□□ -1.08
VAPA-207ENST00000583879 NOS1P29475 1434 aa8.31□□□□□ -1.08
VAPA-207ENST00000583879 DAPK1P53355 1430 aa8.31□□□□□ -1.08
VAPA-207ENST00000583879 EFCAB6Q5THR3 1501 aa8.31□□□□□ -1.08
VAPA-207ENST00000583879 FAM205CA6NFA0 338 aa8.31□□□□□ -1.08
VAPA-207ENST00000583879 TBX22Q9Y458 520 aa8.31□□□□□ -1.08
VAPA-207ENST00000583879 LMTK2Q8IWU2 1503 aa8.3□□□□□ -1.08
VAPA-207ENST00000583879 PIK3C2BO00750 1634 aa8.3□□□□□ -1.08
VAPA-207ENST00000583879 CEP152O94986 1710 aa8.3□□□□□ -1.08
VAPA-207ENST00000583879 CABP2Q9NPB3 220 aa8.3□□□□□ -1.08
VAPA-207ENST00000583879 JCADQ9P266 1359 aa8.3□□□□□ -1.08
VAPA-207ENST00000583879 CFAP65Q6ZU64 1925 aaKnown RBP8.29□□□□□ -1.08
VAPA-207ENST00000583879 PPP1R15AO75807 674 aaPredicted RBP8.29□□□□□ -1.08
VAPA-207ENST00000583879 DPY19L2Q6NUT2 758 aa8.29□□□□□ -1.08
VAPA-207ENST00000583879 SPOCK2Q92563 424 aa8.29□□□□□ -1.08
VAPA-207ENST00000583879 CIZ1Q9ULV3 898 aaPredicted RBP8.29□□□□□ -1.08
VAPA-207ENST00000583879 PLEKHG1Q9ULL1 1385 aa8.28□□□□□ -1.08
VAPA-207ENST00000583879 ZNF772Q68DY9 489 aaPredicted RBP8.28□□□□□ -1.08
VAPA-207ENST00000583879 CADPS2Q86UW7 1296 aa8.28□□□□□ -1.08
VAPA-207ENST00000583879 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.28□□□□□ -1.08
VAPA-207ENST00000583879 C19orf44Q9H6X5 657 aa8.28□□□□□ -1.08
VAPA-207ENST00000583879 BOLA1Q9Y3E2 137 aa8.28□□□□□ -1.08
VAPA-207ENST00000583879 XIRP1Q702N8 1843 aaKnown RBP8.28□□□□□ -1.08
VAPA-207ENST00000583879 FGD6Q6ZV73 1430 aa8.28□□□□□ -1.08
VAPA-207ENST00000583879 NCOA3Q9Y6Q9 1424 aa8.28□□□□□ -1.08
VAPA-207ENST00000583879 SPATA31A6Q5VVP1 1343 aa8.28□□□□□ -1.08
VAPA-207ENST00000583879 NKTRP30414 1462 aaKnown RBP8.27□□□□□ -1.09
VAPA-207ENST00000583879 CHGAP10645 457 aaKnown RBP8.27□□□□□ -1.09
VAPA-207ENST00000583879 C14orf37Q86TY3 774 aa8.27□□□□□ -1.09
VAPA-207ENST00000583879 ROBO1Q9Y6N7 1651 aa8.27□□□□□ -1.09
VAPA-207ENST00000583879 PTPN23Q9H3S7 1636 aa8.26□□□□□ -1.09
VAPA-207ENST00000583879 POTEB3A0JP26 581 aa8.26□□□□□ -1.09
VAPA-207ENST00000583879 ATF3P18847 181 aa8.26□□□□□ -1.09
VAPA-207ENST00000583879 MEX3CQ5U5Q3 659 aaKnown RBP8.26□□□□□ -1.09
VAPA-207ENST00000583879 NUTM2DQ5VT03 806 aaPredicted RBP8.26□□□□□ -1.09
VAPA-207ENST00000583879 POTEBQ6S5H4 581 aa8.26□□□□□ -1.09
VAPA-207ENST00000583879 UPF1Q92900 1129 aaKnown RBP eCLIP8.26□□□□□ -1.09
VAPA-207ENST00000583879 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
VAPA-207ENST00000583879 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
VAPA-207ENST00000583879 KDM5AP29375 1690 aaKnown RBP8.26□□□□□ -1.09
VAPA-207ENST00000583879 ZFYVE9O95405 1425 aa8.26□□□□□ -1.09
VAPA-207ENST00000583879 RIMS2Q9UQ26 1411 aa8.26□□□□□ -1.09
VAPA-207ENST00000583879 FAM50AQ14320 339 aaKnown RBP8.25□□□□□ -1.09
VAPA-207ENST00000583879 AMOTL2Q9Y2J4 779 aa8.25□□□□□ -1.09
VAPA-207ENST00000583879 ANKRD50Q9ULJ7 1429 aa8.25□□□□□ -1.09
VAPA-207ENST00000583879 RPRD2Q5VT52 1461 aaKnown RBP8.25□□□□□ -1.09
VAPA-207ENST00000583879 ADGRB3O60242 1522 aa8.24□□□□□ -1.09
VAPA-207ENST00000583879 NWD1Q149M9 1564 aa8.24□□□□□ -1.09
VAPA-207ENST00000583879 RXRBP28702 533 aa8.24□□□□□ -1.09
VAPA-207ENST00000583879 IFNLR1Q8IU57 520 aaPredicted RBP8.24□□□□□ -1.09
VAPA-207ENST00000583879 ZNF710Q8N1W2 664 aa8.24□□□□□ -1.09
VAPA-207ENST00000583879 TRIM52Q96A61 297 aa8.24□□□□□ -1.09
VAPA-207ENST00000583879 PIK3R4Q99570 1358 aa8.23□□□□□ -1.09
VAPA-207ENST00000583879 BRINP3Q76B58 766 aa8.23□□□□□ -1.09
VAPA-207ENST00000583879 ADGRL2O95490 1459 aa8.23□□□□□ -1.09
VAPA-207ENST00000583879 ADAMTS13Q76LX8 1427 aa8.22□□□□□ -1.09
VAPA-207ENST00000583879 NUTM2BA6NNL0 878 aaPredicted RBP8.22□□□□□ -1.09
VAPA-207ENST00000583879 NUTM2EB1AL46 878 aaPredicted RBP8.22□□□□□ -1.09
VAPA-207ENST00000583879 HOXB3P14651 431 aaPredicted RBP8.22□□□□□ -1.09
VAPA-207ENST00000583879 NUTM2AQ8IVF1 878 aaPredicted RBP8.22□□□□□ -1.09
VAPA-207ENST00000583879 LRP6O75581 1613 aa8.21□□□□□ -1.09
VAPA-207ENST00000583879 CROCC2H7BZ55 1655 aa8.21□□□□□ -1.09
VAPA-207ENST00000583879 DOK7Q18PE1 504 aa8.21□□□□□ -1.1
VAPA-207ENST00000583879 LRRC59Q96AG4 307 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms