RNA–Protein interactions for RNA: ENST00000583704.1

TTC19-210, Transcript of tetratricopeptide repeat domain 19, human

TSL 2

Gene TTC19, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC19-210	ENST00000583704	LRPPRC	P42704	1394 aa	Known RBP	33.12	■■■□□ 2.89
TTC19-210	ENST00000583704	RAB3GAP2	Q9H2M9	1393 aa		33.11	■■■□□ 2.89
TTC19-210	ENST00000583704	AFF2	P51816	1311 aa		33.11	■■■□□ 2.89
TTC19-210	ENST00000583704	TMEM132E	Q6IEE7	984 aa		33.11	■■■□□ 2.89
TTC19-210	ENST00000583704	SOS2	Q07890	1332 aa	Predicted RBP	33.1	■■■□□ 2.89
TTC19-210	ENST00000583704	WAPL	Q7Z5K2	1190 aa		33.09	■■■□□ 2.89
TTC19-210	ENST00000583704	ABCC11	Q96J66	1382 aa		33.08	■■■□□ 2.89
TTC19-210	ENST00000583704	C8orf37	Q96NL8	207 aa		33.07	■■■□□ 2.88
TTC19-210	ENST00000583704	PLEKHH1	Q9ULM0	1364 aa		33.07	■■■□□ 2.88
TTC19-210	ENST00000583704	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.05	■■■□□ 2.88
TTC19-210	ENST00000583704	RXRB	P28702	533 aa		33.04	■■■□□ 2.88
TTC19-210	ENST00000583704	ESCO1	Q5FWF5	840 aa		33.04	■■■□□ 2.88
TTC19-210	ENST00000583704	NRXN1	Q9ULB1	1477 aa		33.04	■■■□□ 2.88
TTC19-210	ENST00000583704	MYOM2	P54296	1465 aa		33.03	■■■□□ 2.88
TTC19-210	ENST00000583704	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33	■■■□□ 2.87
TTC19-210	ENST00000583704	NUTM2F	A1L443	756 aa		33	■■■□□ 2.87
TTC19-210	ENST00000583704	ADAMTS2	O95450	1211 aa		33	■■■□□ 2.87
TTC19-210	ENST00000583704	NPHP3	Q7Z494	1330 aa		33	■■■□□ 2.87
TTC19-210	ENST00000583704	FMN2	Q9NZ56	1722 aa		32.99	■■■□□ 2.87
TTC19-210	ENST00000583704	PXDN	Q92626	1479 aa		32.99	■■■□□ 2.87
TTC19-210	ENST00000583704	C14orf93	Q9H972	538 aa	Known RBP	32.98	■■■□□ 2.87
TTC19-210	ENST00000583704	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.98	■■■□□ 2.87
TTC19-210	ENST00000583704	CFAP70	Q5T0N1	1121 aa		32.96	■■■□□ 2.87
TTC19-210	ENST00000583704	FOXO3	O43524	673 aa		32.94	■■■□□ 2.86
TTC19-210	ENST00000583704	XPC	Q01831	940 aa	Predicted RBP	32.94	■■■□□ 2.86
TTC19-210	ENST00000583704	NGLY1	Q96IV0	654 aa		32.94	■■■□□ 2.86
TTC19-210	ENST00000583704	QTRT2	Q9H974	415 aa	Known RBP	32.93	■■■□□ 2.86
TTC19-210	ENST00000583704	DHX57	Q6P158	1386 aa	Known RBP	32.92	■■■□□ 2.86
TTC19-210	ENST00000583704	KIF1A	Q12756	1690 aa		32.91	■■■□□ 2.86
TTC19-210	ENST00000583704	RGS12	O14924	1447 aa		32.89	■■■□□ 2.86
TTC19-210	ENST00000583704	SIRT1	Q96EB6	747 aa		32.89	■■■□□ 2.86
TTC19-210	ENST00000583704	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.88	■■■□□ 2.85
TTC19-210	ENST00000583704	RGPD8	O14715	1765 aa	Predicted RBP	32.88	■■■□□ 2.85
TTC19-210	ENST00000583704	RBM6	P78332	1123 aa	Known RBP	32.87	■■■□□ 2.85
TTC19-210	ENST00000583704	MARF1	Q9Y4F3	1742 aa	Known RBP	32.85	■■■□□ 2.85
TTC19-210	ENST00000583704	USP21	Q9UK80	565 aa		32.84	■■■□□ 2.85
TTC19-210	ENST00000583704	DLC1	Q96QB1	1528 aa		32.83	■■■□□ 2.85
TTC19-210	ENST00000583704	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.83	■■■□□ 2.85
TTC19-210	ENST00000583704	PRAM1	Q96QH2	718 aa		32.83	■■■□□ 2.85
TTC19-210	ENST00000583704	ADGRB1	O14514	1584 aa		32.83	■■■□□ 2.85
TTC19-210	ENST00000583704	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.8	■■■□□ 2.84
TTC19-210	ENST00000583704	TRPC5	Q9UL62	973 aa	Predicted RBP	32.77	■■■□□ 2.84
TTC19-210	ENST00000583704	KDM2A	Q9Y2K7	1162 aa		32.77	■■■□□ 2.84
TTC19-210	ENST00000583704	DCAF11	Q8TEB1	546 aa		32.76	■■■□□ 2.83
TTC19-210	ENST00000583704	POGK	Q9P215	609 aa		32.76	■■■□□ 2.83
TTC19-210	ENST00000583704	ATRN	O75882	1429 aa		32.76	■■■□□ 2.83
TTC19-210	ENST00000583704	SPATA31A3	Q5VYP0	1347 aa		32.76	■■■□□ 2.83
TTC19-210	ENST00000583704	ADGRB2	O60241	1585 aa		32.75	■■■□□ 2.83
TTC19-210	ENST00000583704	HRC	P23327	699 aa		32.75	■■■□□ 2.83
TTC19-210	ENST00000583704	PHF8	Q9UPP1	1060 aa		32.75	■■■□□ 2.83
TTC19-210	ENST00000583704	USP32	Q8NFA0	1604 aa		32.74	■■■□□ 2.83
TTC19-210	ENST00000583704	KRT28	Q7Z3Y7	464 aa		32.74	■■■□□ 2.83
TTC19-210	ENST00000583704	TRAK1	Q9UPV9	953 aa		32.73	■■■□□ 2.83
TTC19-210	ENST00000583704	BCL9L	Q86UU0	1499 aa		32.72	■■■□□ 2.83
TTC19-210	ENST00000583704	TNS3	Q68CZ2	1445 aa		32.7	■■■□□ 2.83
TTC19-210	ENST00000583704	ANKAR	Q7Z5J8	1434 aa		32.68	■■■□□ 2.82
TTC19-210	ENST00000583704	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.67	■■■□□ 2.82
TTC19-210	ENST00000583704	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.67	■■■□□ 2.82
TTC19-210	ENST00000583704	PSME1	Q06323	249 aa		32.65	■■■□□ 2.82
TTC19-210	ENST00000583704	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.64	■■■□□ 2.82
TTC19-210	ENST00000583704	STAC3	Q96MF2	364 aa		32.64	■■■□□ 2.82
TTC19-210	ENST00000583704	ABCA3	Q99758	1704 aa		32.63	■■■□□ 2.81
TTC19-210	ENST00000583704	SBNO1	A3KN83	1393 aa		32.63	■■■□□ 2.81
TTC19-210	ENST00000583704	PMFBP1	Q8TBY8	1022 aa		32.63	■■■□□ 2.81
TTC19-210	ENST00000583704	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.63	■■■□□ 2.81
TTC19-210	ENST00000583704	SLIT2	O94813	1529 aa		32.61	■■■□□ 2.81
TTC19-210	ENST00000583704	ATAD2	Q6PL18	1390 aa		32.61	■■■□□ 2.81
TTC19-210	ENST00000583704	TULP4	Q9NRJ4	1543 aa		32.61	■■■□□ 2.81
TTC19-210	ENST00000583704	PLEKHG5	O94827	1062 aa		32.6	■■■□□ 2.81
TTC19-210	ENST00000583704	HAP1	P54257	671 aa	Predicted RBP	32.59	■■■□□ 2.81
TTC19-210	ENST00000583704	LMOD2	Q6P5Q4	547 aa		32.59	■■■□□ 2.81
TTC19-210	ENST00000583704	CABLES1	Q8TDN4	633 aa		32.59	■■■□□ 2.81
TTC19-210	ENST00000583704	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.58	■■■□□ 2.81
TTC19-210	ENST00000583704	ARHGEF10	O15013	1369 aa		32.58	■■■□□ 2.81
TTC19-210	ENST00000583704	EIF3A	Q14152	1382 aa	Known RBP	32.58	■■■□□ 2.81
TTC19-210	ENST00000583704	PRR36	Q9H6K5	1346 aa		32.57	■■■□□ 2.8
TTC19-210	ENST00000583704	GJD4	Q96KN9	370 aa	Predicted RBP	32.57	■■■□□ 2.8
TTC19-210	ENST00000583704	PLCH1	Q4KWH8	1693 aa		32.56	■■■□□ 2.8
TTC19-210	ENST00000583704	UNC5CL	Q8IV45	518 aa		32.56	■■■□□ 2.8
TTC19-210	ENST00000583704	GLI3	P10071	1580 aa		32.55	■■■□□ 2.8
TTC19-210	ENST00000583704	WASL	O00401	505 aa	Predicted RBP	32.54	■■■□□ 2.8
TTC19-210	ENST00000583704	EP400	Q96L91	3159 aa		32.54	■■■□□ 2.8
TTC19-210	ENST00000583704	RALGAPB	Q86X10	1494 aa		32.54	■■■□□ 2.8
TTC19-210	ENST00000583704	ALS2	Q96Q42	1657 aa		32.52	■■■□□ 2.8
TTC19-210	ENST00000583704	NWD2	Q9ULI1	1742 aa		32.51	■■■□□ 2.8
TTC19-210	ENST00000583704	ITSN1	Q15811	1721 aa		32.49	■■■□□ 2.79
TTC19-210	ENST00000583704	KIAA1210	Q9ULL0	1709 aa		32.49	■■■□□ 2.79
TTC19-210	ENST00000583704	GPRASP1	Q5JY77	1395 aa		32.49	■■■□□ 2.79
TTC19-210	ENST00000583704	ATP7B	P35670	1465 aa		32.47	■■■□□ 2.79
TTC19-210	ENST00000583704	NGDN	Q8NEJ9	315 aa	Known RBP	32.43	■■■□□ 2.78
TTC19-210	ENST00000583704	BRWD3	Q6RI45	1802 aa		32.42	■■■□□ 2.78
TTC19-210	ENST00000583704	CRYBG1	Q9Y4K1	1723 aa		32.41	■■■□□ 2.78
TTC19-210	ENST00000583704	VPS72	Q15906	364 aa		32.41	■■■□□ 2.78
TTC19-210	ENST00000583704	FAM83G	A6ND36	823 aa		32.4	■■■□□ 2.78
TTC19-210	ENST00000583704	NRAP	Q86VF7	1730 aa		32.4	■■■□□ 2.78
TTC19-210	ENST00000583704	NUDT16	Q96DE0	195 aa	Known RBP	32.39	■■■□□ 2.78
TTC19-210	ENST00000583704	TOPAZ1	Q8N9V7	1692 aa		32.38	■■■□□ 2.77
TTC19-210	ENST00000583704	CCDC9	Q9Y3X0	531 aa	Known RBP	32.38	■■■□□ 2.77
TTC19-210	ENST00000583704	PAK3	O75914	559 aa	Predicted RBP	32.37	■■■□□ 2.77
TTC19-210	ENST00000583704	NBPF1	Q3BBV0	1214 aa		32.37	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 50 ms