RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 BAG6P46379 1132 aa17.08■□□□□ 0.32
CASC3-208ENST00000583649 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
CASC3-208ENST00000583649 MYOM2P54296 1465 aa17.07■□□□□ 0.32
CASC3-208ENST00000583649 VGFO15240 615 aaPredicted RBP17.07■□□□□ 0.32
CASC3-208ENST00000583649 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
CASC3-208ENST00000583649 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
CASC3-208ENST00000583649 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
CASC3-208ENST00000583649 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
CASC3-208ENST00000583649 RALGAPBQ86X10 1494 aa17.04■□□□□ 0.32
CASC3-208ENST00000583649 FOXO3O43524 673 aa17.03■□□□□ 0.32
CASC3-208ENST00000583649 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
CASC3-208ENST00000583649 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.32
CASC3-208ENST00000583649 HRCP23327 699 aa17.02■□□□□ 0.32
CASC3-208ENST00000583649 KRT27Q7Z3Y8 459 aa17.02■□□□□ 0.32
CASC3-208ENST00000583649 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
CASC3-208ENST00000583649 A0A0G2JS52 829 aa17.01■□□□□ 0.31
CASC3-208ENST00000583649 MYT1Q01538 1121 aa17.01■□□□□ 0.31
CASC3-208ENST00000583649 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.01■□□□□ 0.31
CASC3-208ENST00000583649 ROBO2Q9HCK4 1378 aa17.01■□□□□ 0.31
CASC3-208ENST00000583649 PSDA5PKW4 1024 aaPredicted RBP17■□□□□ 0.31
CASC3-208ENST00000583649 MARF1Q9Y4F3 1742 aaKnown RBP17■□□□□ 0.31
CASC3-208ENST00000583649 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
CASC3-208ENST00000583649 VPS72Q15906 364 aa16.99■□□□□ 0.31
CASC3-208ENST00000583649 SLIT2O94813 1529 aa16.98■□□□□ 0.31
CASC3-208ENST00000583649 XPCQ01831 940 aaPredicted RBP16.98■□□□□ 0.31
CASC3-208ENST00000583649 PXDNQ92626 1479 aa16.98■□□□□ 0.31
CASC3-208ENST00000583649 RPGRIP1LQ68CZ1 1315 aa16.96■□□□□ 0.31
CASC3-208ENST00000583649 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
CASC3-208ENST00000583649 NEXMIFQ5QGS0 1516 aa16.96■□□□□ 0.31
CASC3-208ENST00000583649 ONECUT3O60422 494 aaPredicted RBP16.96■□□□□ 0.31
CASC3-208ENST00000583649 PSME1Q06323 249 aa16.96■□□□□ 0.31
CASC3-208ENST00000583649 GLI3P10071 1580 aa16.95■□□□□ 0.3
CASC3-208ENST00000583649 YY1P25490 414 aa16.95■□□□□ 0.3
CASC3-208ENST00000583649 CCDC144AA2RUR9 1427 aa16.94■□□□□ 0.3
CASC3-208ENST00000583649 SPATA31A3Q5VYP0 1347 aa16.94■□□□□ 0.3
CASC3-208ENST00000583649 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
CASC3-208ENST00000583649 R3HDM1Q15032 1099 aaKnown RBP16.91■□□□□ 0.3
CASC3-208ENST00000583649 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
CASC3-208ENST00000583649 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
CASC3-208ENST00000583649 KIF1BO60333 1816 aa16.89■□□□□ 0.29
CASC3-208ENST00000583649 USP32Q8NFA0 1604 aa16.89■□□□□ 0.29
CASC3-208ENST00000583649 ITGAEP38570 1179 aa16.89■□□□□ 0.29
CASC3-208ENST00000583649 EN1Q05925 392 aaPredicted RBP16.89■□□□□ 0.29
CASC3-208ENST00000583649 BRWD3Q6RI45 1802 aa16.89■□□□□ 0.29
CASC3-208ENST00000583649 NAIPQ13075 1403 aa16.88■□□□□ 0.29
CASC3-208ENST00000583649 LMOD2Q6P5Q4 547 aa16.88■□□□□ 0.29
CASC3-208ENST00000583649 ARHGEF10O15013 1369 aa16.87■□□□□ 0.29
CASC3-208ENST00000583649 CLTCL1P53675 1640 aa16.86■□□□□ 0.29
CASC3-208ENST00000583649 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
CASC3-208ENST00000583649 KIF1AQ12756 1690 aa16.85■□□□□ 0.29
CASC3-208ENST00000583649 NWD2Q9ULI1 1742 aa16.85■□□□□ 0.29
CASC3-208ENST00000583649 TNS3Q68CZ2 1445 aa16.85■□□□□ 0.29
CASC3-208ENST00000583649 STK26Q9P289 416 aa16.84■□□□□ 0.29
CASC3-208ENST00000583649 PPP1R1BQ9UD71 204 aaPredicted RBP16.84■□□□□ 0.29
CASC3-208ENST00000583649 PLEKHG5O94827 1062 aa16.83■□□□□ 0.28
CASC3-208ENST00000583649 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
CASC3-208ENST00000583649 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
CASC3-208ENST00000583649 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
CASC3-208ENST00000583649 PARD3Q8TEW0 1356 aa16.82■□□□□ 0.28
CASC3-208ENST00000583649 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
CASC3-208ENST00000583649 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
CASC3-208ENST00000583649 CABLES1Q8TDN4 633 aa16.82■□□□□ 0.28
CASC3-208ENST00000583649 DISP2A7MBM2 1401 aa16.81■□□□□ 0.28
CASC3-208ENST00000583649 WAPLQ7Z5K2 1190 aa16.81■□□□□ 0.28
CASC3-208ENST00000583649 FAM83GA6ND36 823 aa16.8■□□□□ 0.28
CASC3-208ENST00000583649 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
CASC3-208ENST00000583649 FAM196AQ6ZSG2 479 aa16.79■□□□□ 0.28
CASC3-208ENST00000583649 ADGRB2O60241 1585 aa16.79■□□□□ 0.28
CASC3-208ENST00000583649 TECPR2O15040 1411 aa16.79■□□□□ 0.28
CASC3-208ENST00000583649 PLCH1Q4KWH8 1693 aa16.78■□□□□ 0.28
CASC3-208ENST00000583649 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
CASC3-208ENST00000583649 EZH2Q15910 746 aaKnown RBP16.78■□□□□ 0.28
CASC3-208ENST00000583649 APBA3O96018 575 aa16.76■□□□□ 0.27
CASC3-208ENST00000583649 SIRT1Q96EB6 747 aa16.76■□□□□ 0.27
CASC3-208ENST00000583649 SPON1Q9HCB6 807 aa16.76■□□□□ 0.27
CASC3-208ENST00000583649 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
CASC3-208ENST00000583649 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
CASC3-208ENST00000583649 CAMKK2Q96RR4 588 aa16.74■□□□□ 0.27
CASC3-208ENST00000583649 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
CASC3-208ENST00000583649 ANKRD30BQ9BXX2 1392 aa16.74■□□□□ 0.27
CASC3-208ENST00000583649 FMN2Q9NZ56 1722 aa16.73■□□□□ 0.27
CASC3-208ENST00000583649 TRIM37O94972 964 aa16.73■□□□□ 0.27
CASC3-208ENST00000583649 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
CASC3-208ENST00000583649 GPRASP1Q5JY77 1395 aa16.73■□□□□ 0.27
CASC3-208ENST00000583649 NINLQ9Y2I6 1382 aa16.73■□□□□ 0.27
CASC3-208ENST00000583649 RRBP1Q9P2E9 1410 aaKnown RBP16.72■□□□□ 0.27
CASC3-208ENST00000583649 PPLO60437 1756 aa16.72■□□□□ 0.27
CASC3-208ENST00000583649 NRXN1Q9ULB1 1477 aa16.72■□□□□ 0.27
CASC3-208ENST00000583649 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
CASC3-208ENST00000583649 TMEM132EQ6IEE7 984 aa16.71■□□□□ 0.27
CASC3-208ENST00000583649 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
CASC3-208ENST00000583649 PLEKHH1Q9ULM0 1364 aa16.7■□□□□ 0.26
CASC3-208ENST00000583649 PRDM11Q9NQV5 511 aa16.7■□□□□ 0.26
CASC3-208ENST00000583649 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
CASC3-208ENST00000583649 C11orf95C9JLR9 678 aaPredicted RBP16.69■□□□□ 0.26
CASC3-208ENST00000583649 KCNQ2O43526 872 aa16.69■□□□□ 0.26
CASC3-208ENST00000583649 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
CASC3-208ENST00000583649 YTHDC2Q9H6S0 1430 aaKnown RBP16.69■□□□□ 0.26
CASC3-208ENST00000583649 KNDC1Q76NI1 1749 aa16.68■□□□□ 0.26
CASC3-208ENST00000583649 EIF3AQ14152 1382 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms