RNA–Protein interactions for RNA: ENST00000583634.1

TSEN54-210, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-210ENST00000583634 L3MBTL2Q969R5 705 aa17.41■□□□□ 0.38
TSEN54-210ENST00000583634 ORAI2Q96SN7 254 aa17.41■□□□□ 0.38
TSEN54-210ENST00000583634 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
TSEN54-210ENST00000583634 CDK12Q9NYV4 1490 aaPredicted RBP17.41■□□□□ 0.38
TSEN54-210ENST00000583634 ROBO2Q9HCK4 1378 aa17.4■□□□□ 0.38
TSEN54-210ENST00000583634 SPATA31E1Q6ZUB1 1445 aa17.39■□□□□ 0.38
TSEN54-210ENST00000583634 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
TSEN54-210ENST00000583634 NGLY1Q96IV0 654 aa17.39■□□□□ 0.37
TSEN54-210ENST00000583634 RGS12O14924 1447 aa17.38■□□□□ 0.37
TSEN54-210ENST00000583634 VGFO15240 615 aaPredicted RBP17.38■□□□□ 0.37
TSEN54-210ENST00000583634 STAC3Q96MF2 364 aa17.38■□□□□ 0.37
TSEN54-210ENST00000583634 RGL3Q3MIN7 710 aa17.37■□□□□ 0.37
TSEN54-210ENST00000583634 SOS2Q07890 1332 aaPredicted RBP17.36■□□□□ 0.37
TSEN54-210ENST00000583634 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
TSEN54-210ENST00000583634 RPGRIP1LQ68CZ1 1315 aa17.34■□□□□ 0.37
TSEN54-210ENST00000583634 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
TSEN54-210ENST00000583634 LAMC1P11047 1609 aa17.32■□□□□ 0.36
TSEN54-210ENST00000583634 USP21Q9UK80 565 aa17.32■□□□□ 0.36
TSEN54-210ENST00000583634 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
TSEN54-210ENST00000583634 ESCO1Q5FWF5 840 aa17.3■□□□□ 0.36
TSEN54-210ENST00000583634 IFT172Q9UG01 1749 aa17.3■□□□□ 0.36
TSEN54-210ENST00000583634 TRPC5Q9UL62 973 aaPredicted RBP17.29■□□□□ 0.36
TSEN54-210ENST00000583634 PPLO60437 1756 aa17.29■□□□□ 0.36
TSEN54-210ENST00000583634 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
TSEN54-210ENST00000583634 FNBP4Q8N3X1 1017 aaPredicted RBP17.28■□□□□ 0.36
TSEN54-210ENST00000583634 PRAG1Q86YV5 1406 aa17.28■□□□□ 0.36
TSEN54-210ENST00000583634 ADGRF5Q8IZF2 1346 aa17.27■□□□□ 0.36
TSEN54-210ENST00000583634 NUTM2FA1L443 756 aa17.27■□□□□ 0.36
TSEN54-210ENST00000583634 FOXO3O43524 673 aa17.27■□□□□ 0.36
TSEN54-210ENST00000583634 STK26Q9P289 416 aa17.27■□□□□ 0.36
TSEN54-210ENST00000583634 WAPLQ7Z5K2 1190 aa17.26■□□□□ 0.35
TSEN54-210ENST00000583634 MYOM2P54296 1465 aa17.25■□□□□ 0.35
TSEN54-210ENST00000583634 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
TSEN54-210ENST00000583634 NPHP3Q7Z494 1330 aa17.24■□□□□ 0.35
TSEN54-210ENST00000583634 ATRNO75882 1429 aa17.24■□□□□ 0.35
TSEN54-210ENST00000583634 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
TSEN54-210ENST00000583634 COL22A1Q8NFW1 1626 aaPredicted RBP17.24■□□□□ 0.35
TSEN54-210ENST00000583634 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
TSEN54-210ENST00000583634 PXDNQ92626 1479 aa17.23■□□□□ 0.35
TSEN54-210ENST00000583634 CDC42BPGQ6DT37 1551 aa17.22■□□□□ 0.35
TSEN54-210ENST00000583634 BCL9LQ86UU0 1499 aa17.21■□□□□ 0.35
TSEN54-210ENST00000583634 PLEKHH1Q9ULM0 1364 aa17.21■□□□□ 0.35
TSEN54-210ENST00000583634 NRXN1Q9ULB1 1477 aa17.2■□□□□ 0.34
TSEN54-210ENST00000583634 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
TSEN54-210ENST00000583634 TRPM1Q7Z4N2 1603 aa17.19■□□□□ 0.34
TSEN54-210ENST00000583634 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
TSEN54-210ENST00000583634 LRPPRCP42704 1394 aaKnown RBP17.18■□□□□ 0.34
TSEN54-210ENST00000583634 GJD4Q96KN9 370 aaPredicted RBP17.18■□□□□ 0.34
TSEN54-210ENST00000583634 MARF1Q9Y4F3 1742 aaKnown RBP17.18■□□□□ 0.34
TSEN54-210ENST00000583634 TECPR2O15040 1411 aa17.17■□□□□ 0.34
TSEN54-210ENST00000583634 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
TSEN54-210ENST00000583634 PIK3C2GO75747 1445 aa17.15■□□□□ 0.34
TSEN54-210ENST00000583634 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
TSEN54-210ENST00000583634 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
TSEN54-210ENST00000583634 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.33
TSEN54-210ENST00000583634 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
TSEN54-210ENST00000583634 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
TSEN54-210ENST00000583634 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
TSEN54-210ENST00000583634 C14orf93Q9H972 538 aaKnown RBP17.13■□□□□ 0.33
TSEN54-210ENST00000583634 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
TSEN54-210ENST00000583634 YTHDC2Q9H6S0 1430 aaKnown RBP17.13■□□□□ 0.33
TSEN54-210ENST00000583634 CARD11Q9BXL7 1154 aa17.12■□□□□ 0.33
TSEN54-210ENST00000583634 KNDC1Q76NI1 1749 aa17.12■□□□□ 0.33
TSEN54-210ENST00000583634 FMN2Q9NZ56 1722 aa17.12■□□□□ 0.33
TSEN54-210ENST00000583634 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
TSEN54-210ENST00000583634 CFAP70Q5T0N1 1121 aa17.11■□□□□ 0.33
TSEN54-210ENST00000583634 CCDC125Q86Z20 511 aa17.11■□□□□ 0.33
TSEN54-210ENST00000583634 CABLES1Q8TDN4 633 aa17.11■□□□□ 0.33
TSEN54-210ENST00000583634 SLIT2O94813 1529 aa17.11■□□□□ 0.33
TSEN54-210ENST00000583634 RGPD8O14715 1765 aaPredicted RBP17.1■□□□□ 0.33
TSEN54-210ENST00000583634 NBPF1Q3BBV0 1214 aa17.1■□□□□ 0.33
TSEN54-210ENST00000583634 GLI3P10071 1580 aa17.1■□□□□ 0.33
TSEN54-210ENST00000583634 EP400Q96L91 3159 aa17.09■□□□□ 0.33
TSEN54-210ENST00000583634 SAFB2Q14151 953 aaKnown RBP eCLIP17.09■□□□□ 0.33
TSEN54-210ENST00000583634 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
TSEN54-210ENST00000583634 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.09■□□□□ 0.33
TSEN54-210ENST00000583634 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
TSEN54-210ENST00000583634 KIF1AQ12756 1690 aa17.08■□□□□ 0.32
TSEN54-210ENST00000583634 HAP1P54257 671 aaPredicted RBP17.08■□□□□ 0.32
TSEN54-210ENST00000583634 SIRT1Q96EB6 747 aa17.08■□□□□ 0.32
TSEN54-210ENST00000583634 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
TSEN54-210ENST00000583634 LMOD2Q6P5Q4 547 aa17.07■□□□□ 0.32
TSEN54-210ENST00000583634 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
TSEN54-210ENST00000583634 BRWD3Q6RI45 1802 aa17.06■□□□□ 0.32
TSEN54-210ENST00000583634 PSME1Q06323 249 aa17.06■□□□□ 0.32
TSEN54-210ENST00000583634 DEFB132Q7Z7B7 95 aa17.06■□□□□ 0.32
TSEN54-210ENST00000583634 SEPT12Q8IYM1 358 aa17.06■□□□□ 0.32
TSEN54-210ENST00000583634 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
TSEN54-210ENST00000583634 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
TSEN54-210ENST00000583634 USP47Q96K76 1375 aa17.05■□□□□ 0.32
TSEN54-210ENST00000583634 HSPA5P11021 654 aaKnown RBP17.04■□□□□ 0.32
TSEN54-210ENST00000583634 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
TSEN54-210ENST00000583634 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
TSEN54-210ENST00000583634 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
TSEN54-210ENST00000583634 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
TSEN54-210ENST00000583634 VPS72Q15906 364 aa17.03■□□□□ 0.32
TSEN54-210ENST00000583634 FAM83GA6ND36 823 aa17.02■□□□□ 0.32
TSEN54-210ENST00000583634 SBNO1A3KN83 1393 aa17.02■□□□□ 0.31
TSEN54-210ENST00000583634 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.31
TSEN54-210ENST00000583634 POGKQ9P215 609 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms