RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NUTM2AQ8IVF1 878 aaPredicted RBP36.48■■■■□ 3.43
TSEN54-209ENST00000583454 ORAI2Q96SN7 254 aa36.47■■■■□ 3.43
TSEN54-209ENST00000583454 SOS2Q07890 1332 aaPredicted RBP36.43■■■■□ 3.42
TSEN54-209ENST00000583454 LRPPRCP42704 1394 aaKnown RBP36.42■■■■□ 3.42
TSEN54-209ENST00000583454 ABCC11Q96J66 1382 aa36.39■■■■□ 3.42
TSEN54-209ENST00000583454 AFF2P51816 1311 aa36.38■■■■□ 3.41
TSEN54-209ENST00000583454 NRXN1Q9ULB1 1477 aa36.38■■■■□ 3.41
TSEN54-209ENST00000583454 COL22A1Q8NFW1 1626 aaPredicted RBP36.37■■■■□ 3.41
TSEN54-209ENST00000583454 TMEM132EQ6IEE7 984 aa36.35■■■■□ 3.41
TSEN54-209ENST00000583454 PLEKHH1Q9ULM0 1364 aa36.35■■■■□ 3.41
TSEN54-209ENST00000583454 FMN2Q9NZ56 1722 aa36.34■■■■□ 3.41
TSEN54-209ENST00000583454 WAPLQ7Z5K2 1190 aa36.34■■■■□ 3.41
TSEN54-209ENST00000583454 STK26Q9P289 416 aa36.34■■■■□ 3.41
TSEN54-209ENST00000583454 MYOM2P54296 1465 aa36.34■■■■□ 3.41
TSEN54-209ENST00000583454 CDK12Q9NYV4 1490 aaPredicted RBP36.33■■■■□ 3.41
TSEN54-209ENST00000583454 YTHDC2Q9H6S0 1430 aaKnown RBP36.33■■■■□ 3.41
TSEN54-209ENST00000583454 PXDNQ92626 1479 aa36.32■■■■□ 3.41
TSEN54-209ENST00000583454 RXRBP28702 533 aa36.29■■■■□ 3.4
TSEN54-209ENST00000583454 C8orf37Q96NL8 207 aa36.29■■■■□ 3.4
TSEN54-209ENST00000583454 C14orf93Q9H972 538 aaKnown RBP36.26■■■■□ 3.4
TSEN54-209ENST00000583454 ESCO1Q5FWF5 840 aa36.25■■■■□ 3.39
TSEN54-209ENST00000583454 NPHP3Q7Z494 1330 aa36.23■■■■□ 3.39
TSEN54-209ENST00000583454 DHX57Q6P158 1386 aaKnown RBP36.23■■■■□ 3.39
TSEN54-209ENST00000583454 MARF1Q9Y4F3 1742 aaKnown RBP36.22■■■■□ 3.39
TSEN54-209ENST00000583454 RGPD8O14715 1765 aaPredicted RBP36.22■■■■□ 3.39
TSEN54-209ENST00000583454 ADAMTS2O95450 1211 aa36.22■■■■□ 3.39
TSEN54-209ENST00000583454 KIF1AQ12756 1690 aa36.2■■■■□ 3.39
TSEN54-209ENST00000583454 RGS12O14924 1447 aa36.2■■■■□ 3.39
TSEN54-209ENST00000583454 CFAP70Q5T0N1 1121 aa36.2■■■■□ 3.39
TSEN54-209ENST00000583454 SIRT1Q96EB6 747 aa36.2■■■■□ 3.39
TSEN54-209ENST00000583454 UPF1Q92900 1129 aaKnown RBP eCLIP36.19■■■■□ 3.38
TSEN54-209ENST00000583454 NUTM2FA1L443 756 aa36.18■■■■□ 3.38
TSEN54-209ENST00000583454 FOXO3O43524 673 aa36.17■■■■□ 3.38
TSEN54-209ENST00000583454 QTRT2Q9H974 415 aaKnown RBP36.17■■■■□ 3.38
TSEN54-209ENST00000583454 PCGF6Q9BYE7 350 aa36.16■■■■□ 3.38
TSEN54-209ENST00000583454 ADGRB1O14514 1584 aa36.15■■■■□ 3.38
TSEN54-209ENST00000583454 NGLY1Q96IV0 654 aa36.15■■■■□ 3.38
TSEN54-209ENST00000583454 XPCQ01831 940 aaPredicted RBP36.14■■■■□ 3.38
TSEN54-209ENST00000583454 DLC1Q96QB1 1528 aa36.13■■■■□ 3.38
TSEN54-209ENST00000583454 RBM6P78332 1123 aaKnown RBP36.13■■■■□ 3.37
TSEN54-209ENST00000583454 FNBP4Q8N3X1 1017 aaPredicted RBP36.1■■■■□ 3.37
TSEN54-209ENST00000583454 STAC3Q96MF2 364 aa36.08■■■■□ 3.37
TSEN54-209ENST00000583454 USP32Q8NFA0 1604 aa36.08■■■■□ 3.37
TSEN54-209ENST00000583454 ADGRB2O60241 1585 aa36.07■■■■□ 3.37
TSEN54-209ENST00000583454 ATRNO75882 1429 aa36.06■■■■□ 3.36
TSEN54-209ENST00000583454 DCAF11Q8TEB1 546 aa36.05■■■■□ 3.36
TSEN54-209ENST00000583454 USP21Q9UK80 565 aa36.05■■■■□ 3.36
TSEN54-209ENST00000583454 PRAM1Q96QH2 718 aa36.04■■■■□ 3.36
TSEN54-209ENST00000583454 SIN3AQ96ST3 1273 aa36.03■■■■□ 3.36
TSEN54-209ENST00000583454 BCL9LQ86UU0 1499 aa36.03■■■■□ 3.36
TSEN54-209ENST00000583454 SPATA31A3Q5VYP0 1347 aa36.03■■■■□ 3.36
TSEN54-209ENST00000583454 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.01■■■■□ 3.36
TSEN54-209ENST00000583454 EP400Q96L91 3159 aa36■■■■□ 3.35
TSEN54-209ENST00000583454 TRPC5Q9UL62 973 aaPredicted RBP35.99■■■■□ 3.35
TSEN54-209ENST00000583454 KDM2AQ9Y2K7 1162 aa35.99■■■■□ 3.35
TSEN54-209ENST00000583454 SAFB2Q14151 953 aaKnown RBP eCLIP35.98■■■■□ 3.35
TSEN54-209ENST00000583454 ABCA3Q99758 1704 aa35.97■■■■□ 3.35
TSEN54-209ENST00000583454 KRT28Q7Z3Y7 464 aa35.96■■■■□ 3.35
TSEN54-209ENST00000583454 PHF8Q9UPP1 1060 aa35.96■■■■□ 3.35
TSEN54-209ENST00000583454 TNS3Q68CZ2 1445 aa35.94■■■■□ 3.34
TSEN54-209ENST00000583454 ANKARQ7Z5J8 1434 aa35.94■■■■□ 3.34
TSEN54-209ENST00000583454 NEUROD1Q13562 356 aa35.92■■■■□ 3.34
TSEN54-209ENST00000583454 SLIT2O94813 1529 aa35.92■■■■□ 3.34
TSEN54-209ENST00000583454 ARHGEF28Q8N1W1 1705 aaKnown RBP35.91■■■■□ 3.34
TSEN54-209ENST00000583454 TRPM3Q9HCF6 1732 aaPredicted RBP35.91■■■■□ 3.34
TSEN54-209ENST00000583454 POGKQ9P215 609 aa35.9■■■■□ 3.34
TSEN54-209ENST00000583454 TRAK1Q9UPV9 953 aa35.89■■■■□ 3.34
TSEN54-209ENST00000583454 SBNO1A3KN83 1393 aa35.89■■■■□ 3.34
TSEN54-209ENST00000583454 L3MBTL2Q969R5 705 aa35.88■■■■□ 3.33
TSEN54-209ENST00000583454 GLI3P10071 1580 aa35.86■■■■□ 3.33
TSEN54-209ENST00000583454 PLCH1Q4KWH8 1693 aa35.85■■■■□ 3.33
TSEN54-209ENST00000583454 TULP4Q9NRJ4 1543 aa35.85■■■■□ 3.33
TSEN54-209ENST00000583454 PRR36Q9H6K5 1346 aa35.83■■■■□ 3.33
TSEN54-209ENST00000583454 HIRIP3Q9BW71 556 aaPredicted RBP35.83■■■■□ 3.33
TSEN54-209ENST00000583454 ALS2Q96Q42 1657 aa35.83■■■■□ 3.33
TSEN54-209ENST00000583454 ATAD2Q6PL18 1390 aa35.82■■■■□ 3.32
TSEN54-209ENST00000583454 PSME1Q06323 249 aa35.82■■■■□ 3.32
TSEN54-209ENST00000583454 NWD2Q9ULI1 1742 aa35.82■■■■□ 3.32
TSEN54-209ENST00000583454 MINK1Q8N4C8 1332 aaPredicted RBP35.81■■■■□ 3.32
TSEN54-209ENST00000583454 PMFBP1Q8TBY8 1022 aa35.8■■■■□ 3.32
TSEN54-209ENST00000583454 GJD4Q96KN9 370 aaPredicted RBP35.8■■■■□ 3.32
TSEN54-209ENST00000583454 CABLES1Q8TDN4 633 aa35.79■■■■□ 3.32
TSEN54-209ENST00000583454 RALGAPBQ86X10 1494 aa35.79■■■■□ 3.32
TSEN54-209ENST00000583454 KIAA1210Q9ULL0 1709 aa35.78■■■■□ 3.32
TSEN54-209ENST00000583454 UNC5CLQ8IV45 518 aa35.78■■■■□ 3.32
TSEN54-209ENST00000583454 ARHGEF10O15013 1369 aa35.77■■■■□ 3.32
TSEN54-209ENST00000583454 CRYBG1Q9Y4K1 1723 aa35.76■■■■□ 3.31
TSEN54-209ENST00000583454 EIF3AQ14152 1382 aaKnown RBP35.76■■■■□ 3.31
TSEN54-209ENST00000583454 WASLO00401 505 aaPredicted RBP35.75■■■■□ 3.31
TSEN54-209ENST00000583454 BRWD3Q6RI45 1802 aa35.75■■■■□ 3.31
TSEN54-209ENST00000583454 ITSN1Q15811 1721 aa35.74■■■■□ 3.31
TSEN54-209ENST00000583454 ATP7BP35670 1465 aa35.72■■■■□ 3.31
TSEN54-209ENST00000583454 NRAPQ86VF7 1730 aa35.71■■■■□ 3.31
TSEN54-209ENST00000583454 CLSPNQ9HAW4 1339 aa35.7■■■■□ 3.31
TSEN54-209ENST00000583454 LMOD2Q6P5Q4 547 aa35.68■■■■□ 3.3
TSEN54-209ENST00000583454 PLEKHG5O94827 1062 aa35.67■■■■□ 3.3
TSEN54-209ENST00000583454 TOPAZ1Q8N9V7 1692 aa35.67■■■■□ 3.3
TSEN54-209ENST00000583454 TONSLQ96HA7 1378 aa35.66■■■■□ 3.3
TSEN54-209ENST00000583454 SRCAPQ6ZRS2 3230 aa35.66■■■■□ 3.3
TSEN54-209ENST00000583454 HAP1P54257 671 aaPredicted RBP35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms