RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 HLA-CQ95604 372 aa11.44□□□□□ -0.58
SMARCE1-219ENST00000583294 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCE1-219ENST00000583294 RNF223E7ERA6 249 aa11.43□□□□□ -0.58
SMARCE1-219ENST00000583294 HOXA2O43364 376 aa11.43□□□□□ -0.58
SMARCE1-219ENST00000583294 NR1I2O75469 434 aa11.43□□□□□ -0.58
SMARCE1-219ENST00000583294 GUCA2AQ02747 115 aa11.43□□□□□ -0.58
SMARCE1-219ENST00000583294 ERICH6Q7L0X2 663 aa11.43□□□□□ -0.58
SMARCE1-219ENST00000583294 SCUBE3Q8IX30 993 aa11.43□□□□□ -0.58
SMARCE1-219ENST00000583294 PCDHB15Q9Y5E8 787 aa11.43□□□□□ -0.58
SMARCE1-219ENST00000583294 V9GY48 417 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-219ENST00000583294 PPEF1O14829 653 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-219ENST00000583294 FUT2Q10981 343 aa11.42□□□□□ -0.58
SMARCE1-219ENST00000583294 FBXO31Q5XUX0 539 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-219ENST00000583294 GFRA3O60609 400 aa11.41□□□□□ -0.58
SMARCE1-219ENST00000583294 S1PR4O95977 384 aa11.41□□□□□ -0.58
SMARCE1-219ENST00000583294 FDX1P10109 184 aa11.4□□□□□ -0.58
SMARCE1-219ENST00000583294 Q6ZNB5 142 aa11.4□□□□□ -0.58
SMARCE1-219ENST00000583294 ADH1BP00325 375 aa11.39□□□□□ -0.59
SMARCE1-219ENST00000583294 QPCTQ16769 361 aa11.39□□□□□ -0.59
SMARCE1-219ENST00000583294 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
SMARCE1-219ENST00000583294 PCDHGC3Q9UN70 934 aa11.38□□□□□ -0.59
SMARCE1-219ENST00000583294 NUTM2BA6NNL0 878 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 NUTM2EB1AL46 878 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 GJA5P36382 358 aa11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 ATP6V1AP38606 617 aa11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 RFC5P40937 340 aa11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 TUSC1Q2TAM9 212 aa11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 NUTM2DQ5VT03 806 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 NUTM2AQ8IVF1 878 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 EMID1Q96A84 441 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-219ENST00000583294 MORN1Q5T089 497 aa11.36□□□□□ -0.59
SMARCE1-219ENST00000583294 LILRB3O75022 631 aa11.35□□□□□ -0.59
SMARCE1-219ENST00000583294 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-219ENST00000583294 SLC6A16Q9GZN6 736 aa11.35□□□□□ -0.59
SMARCE1-219ENST00000583294 SLC19A1P41440 591 aa11.34□□□□□ -0.59
SMARCE1-219ENST00000583294 FLIIQ13045 1269 aa11.34□□□□□ -0.59
SMARCE1-219ENST00000583294 LAPTM4AQ15012 233 aa11.34□□□□□ -0.59
SMARCE1-219ENST00000583294 PPP2R2DQ66LE6 453 aa11.34□□□□□ -0.59
SMARCE1-219ENST00000583294 ANKLE1Q8NAG6 615 aa11.34□□□□□ -0.59
SMARCE1-219ENST00000583294 SPSB2Q99619 263 aa11.34□□□□□ -0.59
SMARCE1-219ENST00000583294 HRCP23327 699 aa11.33□□□□□ -0.6
SMARCE1-219ENST00000583294 ZBTB3Q9H5J0 574 aa11.33□□□□□ -0.6
SMARCE1-219ENST00000583294 SLC27A5Q9Y2P5 690 aa11.33□□□□□ -0.6
SMARCE1-219ENST00000583294 C6orf229H3BNL8 230 aa11.31□□□□□ -0.6
SMARCE1-219ENST00000583294 PRPF38BQ5VTL8 546 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-219ENST00000583294 LIAT1Q6ZQX7 453 aa11.31□□□□□ -0.6
SMARCE1-219ENST00000583294 SYMPKQ92797 1274 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-219ENST00000583294 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
SMARCE1-219ENST00000583294 PDZRN3Q9UPQ7 1066 aa11.31□□□□□ -0.6
SMARCE1-219ENST00000583294 NRG2O14511 850 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-219ENST00000583294 LCE2BO14633 110 aa11.3□□□□□ -0.6
SMARCE1-219ENST00000583294 PLA2G2CQ5R387 149 aa11.3□□□□□ -0.6
SMARCE1-219ENST00000583294 AP1G2O75843 785 aa11.29□□□□□ -0.6
SMARCE1-219ENST00000583294 MTMR2Q13614 643 aa11.29□□□□□ -0.6
SMARCE1-219ENST00000583294 TMEM259Q4ZIN3 620 aa11.29□□□□□ -0.6
SMARCE1-219ENST00000583294 SPRYD7Q5W111 196 aa11.29□□□□□ -0.6
SMARCE1-219ENST00000583294 MCM6Q14566 821 aa11.28□□□□□ -0.6
SMARCE1-219ENST00000583294 SNRKQ9NRH2 765 aa11.28□□□□□ -0.6
SMARCE1-219ENST00000583294 FMNL1O95466 1100 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-219ENST00000583294 TRIM67Q6ZTA4 783 aa11.27□□□□□ -0.61
SMARCE1-219ENST00000583294 FAM160A2Q8N612 972 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-219ENST00000583294 TSC1Q92574 1164 aa11.27□□□□□ -0.61
SMARCE1-219ENST00000583294 BRICD5Q6PL45 260 aa11.26□□□□□ -0.61
SMARCE1-219ENST00000583294 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
SMARCE1-219ENST00000583294 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
SMARCE1-219ENST00000583294 UBTFP17480 764 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-219ENST00000583294 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
SMARCE1-219ENST00000583294 ZNF598Q86UK7 904 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-219ENST00000583294 BANK1Q8NDB2 785 aa11.25□□□□□ -0.61
SMARCE1-219ENST00000583294 CFAP99D6REC4 459 aa11.24□□□□□ -0.61
SMARCE1-219ENST00000583294 Q3C1V9 767 aa11.24□□□□□ -0.61
SMARCE1-219ENST00000583294 SPDYE5A6NIY4 337 aa11.23□□□□□ -0.61
SMARCE1-219ENST00000583294 CLUAP1Q96AJ1 413 aa11.23□□□□□ -0.61
SMARCE1-219ENST00000583294 PRDM9Q9NQV7 894 aa11.23□□□□□ -0.61
SMARCE1-219ENST00000583294 SALL2Q9Y467 1007 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-219ENST00000583294 SUPT5HO00267 1087 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-219ENST00000583294 CTDSPL2Q05D32 466 aa11.22□□□□□ -0.61
SMARCE1-219ENST00000583294 ZNF697Q5TEC3 545 aa11.22□□□□□ -0.61
SMARCE1-219ENST00000583294 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
SMARCE1-219ENST00000583294 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
SMARCE1-219ENST00000583294 FCF1Q9Y324 198 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-219ENST00000583294 RETREG3Q86VR2 466 aa11.2□□□□□ -0.62
SMARCE1-219ENST00000583294 HELBQ8NG08 1087 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-219ENST00000583294 MTMR14Q8NCE2 650 aa11.19□□□□□ -0.62
SMARCE1-219ENST00000583294 POM121Q96HA1 1249 aa11.19□□□□□ -0.62
SMARCE1-219ENST00000583294 TNFRSF10AO00220 468 aa11.17□□□□□ -0.62
SMARCE1-219ENST00000583294 GDF9O60383 454 aa11.17□□□□□ -0.62
SMARCE1-219ENST00000583294 LRRN4Q8WUT4 740 aa11.17□□□□□ -0.62
SMARCE1-219ENST00000583294 USB1Q9BQ65 265 aaKnown RBP11.17□□□□□ -0.62
SMARCE1-219ENST00000583294 MSS51Q4VC12 460 aa11.16□□□□□ -0.62
SMARCE1-219ENST00000583294 RAD21O60216 631 aa11.15□□□□□ -0.62
SMARCE1-219ENST00000583294 PRR20EP86478 221 aa11.15□□□□□ -0.62
SMARCE1-219ENST00000583294 PRR20CP86479 221 aa11.15□□□□□ -0.62
SMARCE1-219ENST00000583294 PRR20DP86480 221 aa11.15□□□□□ -0.62
SMARCE1-219ENST00000583294 PRR20BP86481 221 aa11.15□□□□□ -0.62
SMARCE1-219ENST00000583294 PRR20AP86496 221 aa11.15□□□□□ -0.62
SMARCE1-219ENST00000583294 PER1O15534 1290 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-219ENST00000583294 HMX1Q9NP08 348 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-219ENST00000583294 COG6Q9Y2V7 657 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms