RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 ATF3P18847 181 aa30.9■■■□□ 2.54
TSEN54-208ENST00000583173 ROCK2O75116 1388 aaKnown RBP30.9■■■□□ 2.54
TSEN54-208ENST00000583173 ILDR1Q86SU0 546 aaPredicted RBP30.89■■■□□ 2.54
TSEN54-208ENST00000583173 POGKQ9P215 609 aa30.89■■■□□ 2.54
TSEN54-208ENST00000583173 RALGAPBQ86X10 1494 aa30.88■■■□□ 2.53
TSEN54-208ENST00000583173 SAFB2Q14151 953 aaKnown RBP eCLIP30.85■■■□□ 2.53
TSEN54-208ENST00000583173 NALCNQ8IZF0 1738 aa30.84■■■□□ 2.53
TSEN54-208ENST00000583173 PIP4K2BP78356 416 aa30.84■■■□□ 2.53
TSEN54-208ENST00000583173 CARD11Q9BXL7 1154 aa30.82■■■□□ 2.52
TSEN54-208ENST00000583173 MST1RQ04912 1400 aa30.81■■■□□ 2.52
TSEN54-208ENST00000583173 ARHGEF28Q8N1W1 1705 aaKnown RBP30.79■■■□□ 2.52
TSEN54-208ENST00000583173 MINK1Q8N4C8 1332 aaPredicted RBP30.76■■■□□ 2.52
TSEN54-208ENST00000583173 CENPJQ9HC77 1338 aaPredicted RBP30.76■■■□□ 2.52
TSEN54-208ENST00000583173 CDC42BPGQ6DT37 1551 aa30.75■■■□□ 2.51
TSEN54-208ENST00000583173 C1orf167Q5SNV9 1468 aa30.75■■■□□ 2.51
TSEN54-208ENST00000583173 HIRIP3Q9BW71 556 aaPredicted RBP30.74■■■□□ 2.51
TSEN54-208ENST00000583173 WASLO00401 505 aaPredicted RBP30.73■■■□□ 2.51
TSEN54-208ENST00000583173 BRINP3Q76B58 766 aa30.73■■■□□ 2.51
TSEN54-208ENST00000583173 SCAF1Q9H7N4 1312 aaKnown RBP30.72■■■□□ 2.51
TSEN54-208ENST00000583173 ADGRB2O60241 1585 aa30.71■■■□□ 2.51
TSEN54-208ENST00000583173 ORAI2Q96SN7 254 aa30.69■■■□□ 2.5
TSEN54-208ENST00000583173 HSPA1LP34931 641 aa30.67■■■□□ 2.5
TSEN54-208ENST00000583173 NUTM2FA1L443 756 aa30.66■■■□□ 2.5
TSEN54-208ENST00000583173 CDK19Q9BWU1 502 aa30.66■■■□□ 2.5
TSEN54-208ENST00000583173 EIF3AQ14152 1382 aaKnown RBP30.66■■■□□ 2.5
TSEN54-208ENST00000583173 ROBO1Q9Y6N7 1651 aa30.65■■■□□ 2.5
TSEN54-208ENST00000583173 PRR36Q9H6K5 1346 aa30.64■■■□□ 2.5
TSEN54-208ENST00000583173 FMN2Q9NZ56 1722 aa30.64■■■□□ 2.5
TSEN54-208ENST00000583173 ST20-MTHFSA0A0A6YYL1 179 aa30.62■■■□□ 2.49
TSEN54-208ENST00000583173 SBNO2Q9Y2G9 1366 aa30.62■■■□□ 2.49
TSEN54-208ENST00000583173 ESCO1Q5FWF5 840 aa30.61■■■□□ 2.49
TSEN54-208ENST00000583173 TESK2Q96S53 571 aa30.61■■■□□ 2.49
TSEN54-208ENST00000583173 ANKARQ7Z5J8 1434 aa30.6■■■□□ 2.49
TSEN54-208ENST00000583173 NUDT16Q96DE0 195 aaKnown RBP30.58■■■□□ 2.49
TSEN54-208ENST00000583173 USP47Q96K76 1375 aa30.57■■■□□ 2.48
TSEN54-208ENST00000583173 QRICH2Q9H0J4 1663 aa30.56■■■□□ 2.48
TSEN54-208ENST00000583173 TULP4Q9NRJ4 1543 aa30.56■■■□□ 2.48
TSEN54-208ENST00000583173 USP32Q8NFA0 1604 aa30.55■■■□□ 2.48
TSEN54-208ENST00000583173 DDX17Q92841 729 aaKnown RBP30.55■■■□□ 2.48
TSEN54-208ENST00000583173 EVC2Q86UK5 1308 aa30.54■■■□□ 2.48
TSEN54-208ENST00000583173 CABP2Q9NPB3 220 aa30.53■■■□□ 2.48
TSEN54-208ENST00000583173 PHF8Q9UPP1 1060 aa30.53■■■□□ 2.48
TSEN54-208ENST00000583173 AHDC1Q5TGY3 1603 aaPredicted RBP30.52■■■□□ 2.48
TSEN54-208ENST00000583173 CCDC61Q9Y6R9 512 aa30.52■■■□□ 2.48
TSEN54-208ENST00000583173 ATP7BP35670 1465 aa30.5■■■□□ 2.47
TSEN54-208ENST00000583173 SOS2Q07890 1332 aaPredicted RBP30.5■■■□□ 2.47
TSEN54-208ENST00000583173 FOXO3O43524 673 aa30.5■■■□□ 2.47
TSEN54-208ENST00000583173 RGPD8O14715 1765 aaPredicted RBP30.49■■■□□ 2.47
TSEN54-208ENST00000583173 PLEKHG3A1L390 1219 aa30.49■■■□□ 2.47
TSEN54-208ENST00000583173 SRPK2P78362 688 aaKnown RBP30.49■■■□□ 2.47
TSEN54-208ENST00000583173 SLC24A1O60721 1099 aa30.48■■■□□ 2.47
TSEN54-208ENST00000583173 PUS7Q96PZ0 661 aaKnown RBP30.48■■■□□ 2.47
TSEN54-208ENST00000583173 PMFBP1Q8TBY8 1022 aa30.47■■■□□ 2.47
TSEN54-208ENST00000583173 NHSL1Q5SYE7 1610 aa30.46■■■□□ 2.47
TSEN54-208ENST00000583173 NPHP3Q7Z494 1330 aa30.46■■■□□ 2.47
TSEN54-208ENST00000583173 EIF4G2P78344 907 aaKnown RBP eCLIP30.45■■■□□ 2.47
TSEN54-208ENST00000583173 HSPA5P11021 654 aaKnown RBP30.44■■■□□ 2.46
TSEN54-208ENST00000583173 COL16A1Q07092 1604 aaPredicted RBP30.43■■■□□ 2.46
TSEN54-208ENST00000583173 PHLPP1O60346 1717 aa30.42■■■□□ 2.46
TSEN54-208ENST00000583173 KRT28Q7Z3Y7 464 aa30.41■■■□□ 2.46
TSEN54-208ENST00000583173 LRRC59Q96AG4 307 aaKnown RBP30.41■■■□□ 2.46
TSEN54-208ENST00000583173 PXDNQ92626 1479 aa30.4■■■□□ 2.46
TSEN54-208ENST00000583173 CABP1Q9NZU7 370 aa30.4■■■□□ 2.46
TSEN54-208ENST00000583173 KIF1AQ12756 1690 aa30.39■■■□□ 2.45
TSEN54-208ENST00000583173 POLR3AO14802 1390 aaPredicted RBP30.39■■■□□ 2.45
TSEN54-208ENST00000583173 XPCQ01831 940 aaPredicted RBP30.38■■■□□ 2.45
TSEN54-208ENST00000583173 ACEP12821 1306 aa30.37■■■□□ 2.45
TSEN54-208ENST00000583173 TMF1P82094 1093 aa30.36■■■□□ 2.45
TSEN54-208ENST00000583173 PSME1Q06323 249 aa30.36■■■□□ 2.45
TSEN54-208ENST00000583173 NGDNQ8NEJ9 315 aaKnown RBP30.36■■■□□ 2.45
TSEN54-208ENST00000583173 ATAD2Q6PL18 1390 aa30.36■■■□□ 2.45
TSEN54-208ENST00000583173 DISP3Q9P2K9 1392 aa30.36■■■□□ 2.45
TSEN54-208ENST00000583173 PPIP5K1Q6PFW1 1433 aa30.36■■■□□ 2.45
TSEN54-208ENST00000583173 JCADQ9P266 1359 aa30.35■■■□□ 2.45
TSEN54-208ENST00000583173 TOPAZ1Q8N9V7 1692 aa30.35■■■□□ 2.45
TSEN54-208ENST00000583173 SBNO1A3KN83 1393 aa30.32■■■□□ 2.44
TSEN54-208ENST00000583173 SPATA31A3Q5VYP0 1347 aa30.32■■■□□ 2.44
TSEN54-208ENST00000583173 ITSN1Q15811 1721 aa30.3■■■□□ 2.44
TSEN54-208ENST00000583173 SLC12A5Q9H2X9 1139 aa30.29■■■□□ 2.44
TSEN54-208ENST00000583173 PNPLA6Q8IY17 1366 aa30.28■■■□□ 2.44
TSEN54-208ENST00000583173 CDCA8Q53HL2 280 aa30.27■■■□□ 2.44
TSEN54-208ENST00000583173 C11orf95C9JLR9 678 aaPredicted RBP30.26■■■□□ 2.43
TSEN54-208ENST00000583173 CPSF1Q10570 1443 aaKnown RBP30.26■■■□□ 2.43
TSEN54-208ENST00000583173 ZNF692Q9BU19 519 aaPredicted RBP30.26■■■□□ 2.43
TSEN54-208ENST00000583173 SPATA31A6Q5VVP1 1343 aa30.23■■■□□ 2.43
TSEN54-208ENST00000583173 SSH2Q76I76 1423 aa30.23■■■□□ 2.43
TSEN54-208ENST00000583173 ZEB1P37275 1124 aaPredicted RBP30.23■■■□□ 2.43
TSEN54-208ENST00000583173 CD163L1Q9NR16 1453 aa30.23■■■□□ 2.43
TSEN54-208ENST00000583173 SHPRHQ149N8 1683 aa30.21■■■□□ 2.43
TSEN54-208ENST00000583173 BRD4O60885 1362 aaPredicted RBP30.21■■■□□ 2.43
TSEN54-208ENST00000583173 TMC1Q8TDI8 760 aa30.21■■■□□ 2.43
TSEN54-208ENST00000583173 TRPM3Q9HCF6 1732 aaPredicted RBP30.21■■■□□ 2.43
TSEN54-208ENST00000583173 TNS3Q68CZ2 1445 aa30.21■■■□□ 2.43
TSEN54-208ENST00000583173 NINLQ9Y2I6 1382 aa30.19■■■□□ 2.42
TSEN54-208ENST00000583173 USP6P35125 1406 aa30.19■■■□□ 2.42
TSEN54-208ENST00000583173 ARHGEF10O15013 1369 aa30.15■■■□□ 2.42
TSEN54-208ENST00000583173 PAK3O75914 559 aaPredicted RBP30.15■■■□□ 2.42
TSEN54-208ENST00000583173 TERF2IPQ9NYB0 399 aa30.14■■■□□ 2.42
TSEN54-208ENST00000583173 COL22A1Q8NFW1 1626 aaPredicted RBP30.14■■■□□ 2.41
TSEN54-208ENST00000583173 TTC21BQ7Z4L5 1316 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms