RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
ERBB2-214ENST00000583038 PPP2R1AP30153 589 aa19.85■□□□□ 0.77
ERBB2-214ENST00000583038 GPS2Q13227 327 aa19.85■□□□□ 0.77
ERBB2-214ENST00000583038 FOXD4L6Q3SYB3 417 aaPredicted RBP19.85■□□□□ 0.77
ERBB2-214ENST00000583038 FOXD4L3Q6VB84 417 aaPredicted RBP19.85■□□□□ 0.77
ERBB2-214ENST00000583038 VPS37DQ86XT2 251 aa19.85■□□□□ 0.77
ERBB2-214ENST00000583038 ERICH2A1L162 156 aa19.85■□□□□ 0.77
ERBB2-214ENST00000583038 CFAP70Q5T0N1 1121 aa19.85■□□□□ 0.77
ERBB2-214ENST00000583038 KIAA1107Q9UPP5 1409 aa19.85■□□□□ 0.77
ERBB2-214ENST00000583038 ATF3P18847 181 aa19.85■□□□□ 0.77
ERBB2-214ENST00000583038 NLRP6P59044 892 aa19.85■□□□□ 0.77
ERBB2-214ENST00000583038 CT47B1P0C2W7 299 aaPredicted RBP19.84■□□□□ 0.77
ERBB2-214ENST00000583038 PANK1Q8TE04 598 aa19.84■□□□□ 0.77
ERBB2-214ENST00000583038 SAFBQ15424 915 aaKnown RBP eCLIP19.84■□□□□ 0.77
ERBB2-214ENST00000583038 RIC3Q7Z5B4 369 aa19.84■□□□□ 0.77
ERBB2-214ENST00000583038 AFAP1Q8N556 730 aa19.84■□□□□ 0.77
ERBB2-214ENST00000583038 NINLQ9Y2I6 1382 aa19.84■□□□□ 0.77
ERBB2-214ENST00000583038 CCDC30Q5VVM6 783 aa19.84■□□□□ 0.77
ERBB2-214ENST00000583038 ARID3AQ99856 593 aa19.84■□□□□ 0.77
ERBB2-214ENST00000583038 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
ERBB2-214ENST00000583038 EHBP1L1Q8N3D4 1523 aa19.83■□□□□ 0.77
ERBB2-214ENST00000583038 VPS37CA5D8V6 355 aaPredicted RBP19.83■□□□□ 0.77
ERBB2-214ENST00000583038 TMEM132EQ6IEE7 984 aa19.83■□□□□ 0.77
ERBB2-214ENST00000583038 CCDC73Q6ZRK6 1079 aa19.83■□□□□ 0.77
ERBB2-214ENST00000583038 CLASRPQ8N2M8 674 aaKnown RBP19.83■□□□□ 0.77
ERBB2-214ENST00000583038 RALYLQ86SE5 291 aaKnown RBP19.83■□□□□ 0.76
ERBB2-214ENST00000583038 MCM2P49736 904 aa19.82■□□□□ 0.76
ERBB2-214ENST00000583038 HSP90AA2PQ14568 343 aaPredicted RBP19.82■□□□□ 0.76
ERBB2-214ENST00000583038 PSMA5P28066 241 aa19.82■□□□□ 0.76
ERBB2-214ENST00000583038 TRIM34Q9BYJ4 488 aa19.81■□□□□ 0.76
ERBB2-214ENST00000583038 GPRASP1Q5JY77 1395 aa19.81■□□□□ 0.76
ERBB2-214ENST00000583038 SLC52A1Q9NWF4 448 aa19.8■□□□□ 0.76
ERBB2-214ENST00000583038 SASS6Q6UVJ0 657 aa19.8■□□□□ 0.76
ERBB2-214ENST00000583038 NLRP2Q9NX02 1062 aa19.8■□□□□ 0.76
ERBB2-214ENST00000583038 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.8■□□□□ 0.76
ERBB2-214ENST00000583038 GCC1Q96CN9 775 aa19.8■□□□□ 0.76
ERBB2-214ENST00000583038 NFXL1Q6ZNB6 911 aa19.8■□□□□ 0.76
ERBB2-214ENST00000583038 CNTROBQ8N137 903 aa19.8■□□□□ 0.76
ERBB2-214ENST00000583038 TROQ12816 1431 aaPredicted RBP19.8■□□□□ 0.76
ERBB2-214ENST00000583038 C9orf84Q5VXU9 1444 aa19.8■□□□□ 0.76
ERBB2-214ENST00000583038 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
ERBB2-214ENST00000583038 ZNF692Q9BU19 519 aaPredicted RBP19.79■□□□□ 0.76
ERBB2-214ENST00000583038 HIP1O00291 1037 aa19.78■□□□□ 0.76
ERBB2-214ENST00000583038 PRKAR2BP31323 418 aa19.77■□□□□ 0.76
ERBB2-214ENST00000583038 PLEKHO1Q53GL0 409 aaPredicted RBP19.77■□□□□ 0.76
ERBB2-214ENST00000583038 SYTL4Q96C24 671 aaPredicted RBP19.77■□□□□ 0.76
ERBB2-214ENST00000583038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.77■□□□□ 0.76
ERBB2-214ENST00000583038 PRG4Q92954 1404 aaPredicted RBP19.77■□□□□ 0.76
ERBB2-214ENST00000583038 PDCP20941 246 aa19.76■□□□□ 0.75
ERBB2-214ENST00000583038 NEUROD6Q96NK8 337 aa19.76■□□□□ 0.75
ERBB2-214ENST00000583038 MBD3O95983 291 aa19.76■□□□□ 0.75
ERBB2-214ENST00000583038 ERC1Q8IUD2 1116 aa19.76■□□□□ 0.75
ERBB2-214ENST00000583038 CCAR2Q8N163 923 aaKnown RBP19.76■□□□□ 0.75
ERBB2-214ENST00000583038 TCEAL9Q9UHQ7 104 aa19.76■□□□□ 0.75
ERBB2-214ENST00000583038 TWISTNBQ3B726 338 aaPredicted RBP19.75■□□□□ 0.75
ERBB2-214ENST00000583038 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.75■□□□□ 0.75
ERBB2-214ENST00000583038 WDR63Q8IWG1 891 aa19.75■□□□□ 0.75
ERBB2-214ENST00000583038 RPGRIP1LQ68CZ1 1315 aa19.75■□□□□ 0.75
ERBB2-214ENST00000583038 EXOSC9Q06265 439 aaKnown RBP19.75■□□□□ 0.75
ERBB2-214ENST00000583038 DHX16O60231 1041 aaKnown RBP19.75■□□□□ 0.75
ERBB2-214ENST00000583038 MRE11P49959 708 aa19.75■□□□□ 0.75
ERBB2-214ENST00000583038 CTDP1Q9Y5B0 961 aaPredicted RBP19.74■□□□□ 0.75
ERBB2-214ENST00000583038 SURF6O75683 361 aaKnown RBP19.74■□□□□ 0.75
ERBB2-214ENST00000583038 RABEP1Q15276 862 aa19.74■□□□□ 0.75
ERBB2-214ENST00000583038 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.74■□□□□ 0.75
ERBB2-214ENST00000583038 IFT140Q96RY7 1462 aa19.74■□□□□ 0.75
ERBB2-214ENST00000583038 XBP1P17861 261 aa19.74■□□□□ 0.75
ERBB2-214ENST00000583038 ZNF428Q96B54 188 aa19.73■□□□□ 0.75
ERBB2-214ENST00000583038 WASHC4Q2M389 1173 aa19.73■□□□□ 0.75
ERBB2-214ENST00000583038 PNISRQ8TF01 805 aaKnown RBP19.73■□□□□ 0.75
ERBB2-214ENST00000583038 NFKBIBQ15653 356 aa19.73■□□□□ 0.75
ERBB2-214ENST00000583038 CDCA7LQ96GN5 454 aa19.73■□□□□ 0.75
ERBB2-214ENST00000583038 PCMTD1Q96MG8 357 aaPredicted RBP19.73■□□□□ 0.75
ERBB2-214ENST00000583038 NAT10Q9H0A0 1025 aaKnown RBP19.73■□□□□ 0.75
ERBB2-214ENST00000583038 ANKRD30BQ9BXX2 1392 aa19.72■□□□□ 0.75
ERBB2-214ENST00000583038 TXNDC2Q86VQ3 553 aa19.72■□□□□ 0.75
ERBB2-214ENST00000583038 MSH5O43196 834 aa19.72■□□□□ 0.75
ERBB2-214ENST00000583038 AIMP1Q12904 312 aaKnown RBP19.72■□□□□ 0.75
ERBB2-214ENST00000583038 NBPF1Q3BBV0 1214 aa19.72■□□□□ 0.75
ERBB2-214ENST00000583038 HOMER1Q86YM7 354 aa19.72■□□□□ 0.75
ERBB2-214ENST00000583038 FSD1Q9BTV5 496 aa19.72■□□□□ 0.75
ERBB2-214ENST00000583038 ABTB2Q8N961 1025 aa19.72■□□□□ 0.75
ERBB2-214ENST00000583038 PRAM1Q96QH2 718 aa19.72■□□□□ 0.75
ERBB2-214ENST00000583038 BRMS1Q9HCU9 246 aa19.72■□□□□ 0.75
ERBB2-214ENST00000583038 LETM1O95202 739 aaPredicted RBP19.71■□□□□ 0.75
ERBB2-214ENST00000583038 RBM33Q96EV2 1170 aaKnown RBP19.71■□□□□ 0.75
ERBB2-214ENST00000583038 GNAI2P04899 355 aa19.71■□□□□ 0.75
ERBB2-214ENST00000583038 SMG6Q86US8 1419 aaKnown RBP19.71■□□□□ 0.74
ERBB2-214ENST00000583038 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
ERBB2-214ENST00000583038 TBC1D2BQ9UPU7 963 aa19.7■□□□□ 0.74
ERBB2-214ENST00000583038 SART3Q15020 963 aaKnown RBP19.7■□□□□ 0.74
ERBB2-214ENST00000583038 CCT4P50991 539 aaKnown RBP19.7■□□□□ 0.74
ERBB2-214ENST00000583038 SYNJ1O43426 1573 aa19.7■□□□□ 0.74
ERBB2-214ENST00000583038 MRC2Q9UBG0 1479 aa19.69■□□□□ 0.74
ERBB2-214ENST00000583038 FAM43AQ8N2R8 423 aa19.69■□□□□ 0.74
ERBB2-214ENST00000583038 ZNF592Q92610 1267 aa19.69■□□□□ 0.74
ERBB2-214ENST00000583038 THEMISQ8N1K5 641 aaPredicted RBP19.69■□□□□ 0.74
ERBB2-214ENST00000583038 ATAD2Q6PL18 1390 aa19.68■□□□□ 0.74
ERBB2-214ENST00000583038 NBPF8Q3BBV2 869 aa19.68■□□□□ 0.74
ERBB2-214ENST00000583038 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms