RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
TOP3A-214ENST00000582981 PIK3C2GO75747 1445 aa13.33□□□□□ -0.28
TOP3A-214ENST00000582981 ERVK-7P63135 1459 aa13.33□□□□□ -0.28
TOP3A-214ENST00000582981 TRIM44Q96DX7 344 aaPredicted RBP13.33□□□□□ -0.28
TOP3A-214ENST00000582981 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
TOP3A-214ENST00000582981 CLTCL1P53675 1640 aa13.33□□□□□ -0.28
TOP3A-214ENST00000582981 EIF3AQ14152 1382 aaKnown RBP13.33□□□□□ -0.28
TOP3A-214ENST00000582981 PLCH2O75038 1416 aa13.33□□□□□ -0.28
TOP3A-214ENST00000582981 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
TOP3A-214ENST00000582981 ESPNB1AK53 854 aa13.32□□□□□ -0.28
TOP3A-214ENST00000582981 FTSJ3Q8IY81 847 aaKnown RBP13.31□□□□□ -0.28
TOP3A-214ENST00000582981 GGNBP2Q9H3C7 697 aa13.31□□□□□ -0.28
TOP3A-214ENST00000582981 NOS1P29475 1434 aa13.3□□□□□ -0.28
TOP3A-214ENST00000582981 INSRP06213 1382 aa13.3□□□□□ -0.28
TOP3A-214ENST00000582981 TBC1D2Q9BYX2 928 aa13.3□□□□□ -0.28
TOP3A-214ENST00000582981 KANK1Q14678 1352 aa13.29□□□□□ -0.28
TOP3A-214ENST00000582981 RNF17Q9BXT8 1623 aaKnown RBP13.29□□□□□ -0.28
TOP3A-214ENST00000582981 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
TOP3A-214ENST00000582981 ITPRIPQ8IWB1 547 aa13.29□□□□□ -0.28
TOP3A-214ENST00000582981 RUNDC1Q96C34 613 aa13.29□□□□□ -0.28
TOP3A-214ENST00000582981 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
TOP3A-214ENST00000582981 SMC4Q9NTJ3 1288 aa13.29□□□□□ -0.28
TOP3A-214ENST00000582981 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
TOP3A-214ENST00000582981 PDCL3Q9H2J4 239 aa13.28□□□□□ -0.28
TOP3A-214ENST00000582981 ERBB4Q15303 1308 aa13.28□□□□□ -0.28
TOP3A-214ENST00000582981 EXOSC9Q06265 439 aaKnown RBP13.28□□□□□ -0.28
TOP3A-214ENST00000582981 SYNMO15061 1565 aa13.28□□□□□ -0.28
TOP3A-214ENST00000582981 MYOM1P52179 1685 aa13.28□□□□□ -0.28
TOP3A-214ENST00000582981 ABCC2Q92887 1545 aa13.27□□□□□ -0.28
TOP3A-214ENST00000582981 IQGAP1P46940 1657 aa13.27□□□□□ -0.28
TOP3A-214ENST00000582981 LAMC1P11047 1609 aa13.27□□□□□ -0.29
TOP3A-214ENST00000582981 PLXNC1O60486 1568 aa13.27□□□□□ -0.29
TOP3A-214ENST00000582981 UPF2Q9HAU5 1272 aaKnown RBP13.27□□□□□ -0.29
TOP3A-214ENST00000582981 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-214ENST00000582981 MAPK8IP3Q9UPT6 1336 aa13.26□□□□□ -0.29
TOP3A-214ENST00000582981 KIAA1211Q6ZU35 1233 aa13.26□□□□□ -0.29
TOP3A-214ENST00000582981 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
TOP3A-214ENST00000582981 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
TOP3A-214ENST00000582981 FAM13BQ9NYF5 915 aa13.25□□□□□ -0.29
TOP3A-214ENST00000582981 ABCC1P33527 1531 aa13.25□□□□□ -0.29
TOP3A-214ENST00000582981 AAMPQ13685 434 aa13.25□□□□□ -0.29
TOP3A-214ENST00000582981 C1orf115Q9H7X2 142 aa13.25□□□□□ -0.29
TOP3A-214ENST00000582981 MRE11P49959 708 aa13.24□□□□□ -0.29
TOP3A-214ENST00000582981 TRPM2O94759 1503 aa13.24□□□□□ -0.29
TOP3A-214ENST00000582981 TRAK2O60296 914 aa13.24□□□□□ -0.29
TOP3A-214ENST00000582981 THUMPD2Q9BTF0 503 aaKnown RBP13.24□□□□□ -0.29
TOP3A-214ENST00000582981 FSD2A1L4K1 749 aa13.24□□□□□ -0.29
TOP3A-214ENST00000582981 MCM4P33991 863 aa13.24□□□□□ -0.29
TOP3A-214ENST00000582981 PMFBP1Q8TBY8 1022 aa13.24□□□□□ -0.29
TOP3A-214ENST00000582981 SSH1Q8WYL5 1049 aa13.24□□□□□ -0.29
TOP3A-214ENST00000582981 LNPKQ9C0E8 428 aa13.24□□□□□ -0.29
TOP3A-214ENST00000582981 MINK1Q8N4C8 1332 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-214ENST00000582981 CFAP53Q96M91 514 aa13.23□□□□□ -0.29
TOP3A-214ENST00000582981 GRPEL1Q9HAV7 217 aa13.23□□□□□ -0.29
TOP3A-214ENST00000582981 KDM5AP29375 1690 aaKnown RBP13.23□□□□□ -0.29
TOP3A-214ENST00000582981 PTPRTO14522 1441 aa13.23□□□□□ -0.29
TOP3A-214ENST00000582981 TPM2P07951 284 aa13.23□□□□□ -0.29
TOP3A-214ENST00000582981 TRIM27P14373 513 aa13.23□□□□□ -0.29
TOP3A-214ENST00000582981 DZIP1LQ8IYY4 767 aaKnown RBP13.23□□□□□ -0.29
TOP3A-214ENST00000582981 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
TOP3A-214ENST00000582981 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
TOP3A-214ENST00000582981 ZFYVE16Q7Z3T8 1539 aa13.22□□□□□ -0.29
TOP3A-214ENST00000582981 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
TOP3A-214ENST00000582981 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
TOP3A-214ENST00000582981 RWDD1Q9H446 243 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-214ENST00000582981 NOB1Q9ULX3 412 aaKnown RBP13.22□□□□□ -0.29
TOP3A-214ENST00000582981 FANCAO15360 1455 aa13.22□□□□□ -0.29
TOP3A-214ENST00000582981 ABCA6Q8N139 1617 aa13.21□□□□□ -0.29
TOP3A-214ENST00000582981 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
TOP3A-214ENST00000582981 POLR3AO14802 1390 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-214ENST00000582981 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.29
TOP3A-214ENST00000582981 PRDM4Q9UKN5 801 aa13.21□□□□□ -0.29
TOP3A-214ENST00000582981 ZCCHC11Q5TAX3 1644 aaKnown RBP13.21□□□□□ -0.3
TOP3A-214ENST00000582981 CEP152O94986 1710 aa13.21□□□□□ -0.3
TOP3A-214ENST00000582981 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
TOP3A-214ENST00000582981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
TOP3A-214ENST00000582981 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
TOP3A-214ENST00000582981 C22orf23Q9BZE7 217 aa13.2□□□□□ -0.3
TOP3A-214ENST00000582981 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
TOP3A-214ENST00000582981 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
TOP3A-214ENST00000582981 ZHX1Q9UKY1 873 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-214ENST00000582981 ADGRL1O94910 1474 aa13.19□□□□□ -0.3
TOP3A-214ENST00000582981 RAPGEF3O95398 923 aa13.19□□□□□ -0.3
TOP3A-214ENST00000582981 PRDM10Q9NQV6 1147 aa13.19□□□□□ -0.3
TOP3A-214ENST00000582981 HMOX1P09601 288 aa13.18□□□□□ -0.3
TOP3A-214ENST00000582981 FGD1P98174 961 aa13.18□□□□□ -0.3
TOP3A-214ENST00000582981 RIPK4P57078 832 aa13.18□□□□□ -0.3
TOP3A-214ENST00000582981 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
TOP3A-214ENST00000582981 ATP7AQ04656 1500 aa13.17□□□□□ -0.3
TOP3A-214ENST00000582981 TMPOP42166 694 aaKnown RBP13.17□□□□□ -0.3
TOP3A-214ENST00000582981 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
TOP3A-214ENST00000582981 C14orf93Q9H972 538 aaKnown RBP13.16□□□□□ -0.3
TOP3A-214ENST00000582981 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
TOP3A-214ENST00000582981 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
TOP3A-214ENST00000582981 APBB1O00213 710 aa13.15□□□□□ -0.3
TOP3A-214ENST00000582981 MAP3K4Q9Y6R4 1608 aa13.15□□□□□ -0.3
TOP3A-214ENST00000582981 MROH2AA6NES4 1674 aa13.15□□□□□ -0.3
TOP3A-214ENST00000582981 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.3
TOP3A-214ENST00000582981 CYB5RLQ6IPT4 315 aa13.14□□□□□ -0.31
TOP3A-214ENST00000582981 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms