RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.33■□□□□ 0.37
CDH8-208ENST00000582980 MINK1Q8N4C8 1332 aaPredicted RBP17.33■□□□□ 0.36
CDH8-208ENST00000582980 TMF1P82094 1093 aa17.33■□□□□ 0.36
CDH8-208ENST00000582980 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
CDH8-208ENST00000582980 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.36
CDH8-208ENST00000582980 LRRC7Q96NW7 1537 aa17.32■□□□□ 0.36
CDH8-208ENST00000582980 ADGRL3Q9HAR2 1447 aa17.32■□□□□ 0.36
CDH8-208ENST00000582980 TMEM94Q12767 1356 aa17.32■□□□□ 0.36
CDH8-208ENST00000582980 C14orf37Q86TY3 774 aa17.32■□□□□ 0.36
CDH8-208ENST00000582980 EVC2Q86UK5 1308 aa17.31■□□□□ 0.36
CDH8-208ENST00000582980 LTBP4Q8N2S1 1624 aa17.31■□□□□ 0.36
CDH8-208ENST00000582980 CDCA8Q53HL2 280 aa17.3■□□□□ 0.36
CDH8-208ENST00000582980 CDC42BPGQ6DT37 1551 aa17.3■□□□□ 0.36
CDH8-208ENST00000582980 XIRP1Q702N8 1843 aaKnown RBP17.29■□□□□ 0.36
CDH8-208ENST00000582980 TULP4Q9NRJ4 1543 aa17.29■□□□□ 0.36
CDH8-208ENST00000582980 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
CDH8-208ENST00000582980 MSH6P52701 1360 aa17.28■□□□□ 0.36
CDH8-208ENST00000582980 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
CDH8-208ENST00000582980 DCCP43146 1447 aa17.27■□□□□ 0.35
CDH8-208ENST00000582980 DISP3Q9P2K9 1392 aa17.27■□□□□ 0.35
CDH8-208ENST00000582980 WASLO00401 505 aaPredicted RBP17.26■□□□□ 0.35
CDH8-208ENST00000582980 C19orf44Q9H6X5 657 aa17.26■□□□□ 0.35
CDH8-208ENST00000582980 FMN2Q9NZ56 1722 aa17.25■□□□□ 0.35
CDH8-208ENST00000582980 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
CDH8-208ENST00000582980 PUS7Q96PZ0 661 aaKnown RBP17.25■□□□□ 0.35
CDH8-208ENST00000582980 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
CDH8-208ENST00000582980 ATF3P18847 181 aa17.23■□□□□ 0.35
CDH8-208ENST00000582980 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
CDH8-208ENST00000582980 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
CDH8-208ENST00000582980 CCDC7Q96M83 1385 aa17.22■□□□□ 0.35
CDH8-208ENST00000582980 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.35
CDH8-208ENST00000582980 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.35
CDH8-208ENST00000582980 CABP2Q9NPB3 220 aa17.21■□□□□ 0.35
CDH8-208ENST00000582980 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
CDH8-208ENST00000582980 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.34
CDH8-208ENST00000582980 IQSEC2Q5JU85 1478 aa17.2■□□□□ 0.34
CDH8-208ENST00000582980 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
CDH8-208ENST00000582980 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
CDH8-208ENST00000582980 ATP7BP35670 1465 aa17.19■□□□□ 0.34
CDH8-208ENST00000582980 NINLQ9Y2I6 1382 aa17.19■□□□□ 0.34
CDH8-208ENST00000582980 NUDT16Q96DE0 195 aaKnown RBP17.18■□□□□ 0.34
CDH8-208ENST00000582980 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
CDH8-208ENST00000582980 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
CDH8-208ENST00000582980 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
CDH8-208ENST00000582980 NUTM2FA1L443 756 aa17.16■□□□□ 0.34
CDH8-208ENST00000582980 MYOM1P52179 1685 aa17.16■□□□□ 0.34
CDH8-208ENST00000582980 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
CDH8-208ENST00000582980 MST1RQ04912 1400 aa17.15■□□□□ 0.34
CDH8-208ENST00000582980 PRR36Q9H6K5 1346 aa17.15■□□□□ 0.34
CDH8-208ENST00000582980 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
CDH8-208ENST00000582980 C1orf167Q5SNV9 1468 aa17.14■□□□□ 0.33
CDH8-208ENST00000582980 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
CDH8-208ENST00000582980 CERKQ8TCT0 537 aa17.13■□□□□ 0.33
CDH8-208ENST00000582980 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
CDH8-208ENST00000582980 CABP1Q9NZU7 370 aa17.11■□□□□ 0.33
CDH8-208ENST00000582980 TOM1O60784 492 aa17.1■□□□□ 0.33
CDH8-208ENST00000582980 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
CDH8-208ENST00000582980 TERF2IPQ9NYB0 399 aa17.1■□□□□ 0.33
CDH8-208ENST00000582980 SLAIN2Q9P270 581 aa17.1■□□□□ 0.33
CDH8-208ENST00000582980 PLEKHG3A1L390 1219 aa17.09■□□□□ 0.33
CDH8-208ENST00000582980 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
CDH8-208ENST00000582980 SLC12A5Q9H2X9 1139 aa17.09■□□□□ 0.33
CDH8-208ENST00000582980 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
CDH8-208ENST00000582980 ANKRD36BQ8N2N9 1353 aa17.09■□□□□ 0.33
CDH8-208ENST00000582980 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
CDH8-208ENST00000582980 NGDNQ8NEJ9 315 aaKnown RBP17.07■□□□□ 0.32
CDH8-208ENST00000582980 PMFBP1Q8TBY8 1022 aa17.07■□□□□ 0.32
CDH8-208ENST00000582980 ORAI2Q96SN7 254 aa17.07■□□□□ 0.32
CDH8-208ENST00000582980 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
CDH8-208ENST00000582980 DDX10Q13206 875 aaKnown RBP17.06■□□□□ 0.32
CDH8-208ENST00000582980 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
CDH8-208ENST00000582980 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
CDH8-208ENST00000582980 A0A1W2PP64 1363 aa17.05■□□□□ 0.32
CDH8-208ENST00000582980 MON2Q7Z3U7 1717 aa17.05■□□□□ 0.32
CDH8-208ENST00000582980 ACEP12821 1306 aa17.05■□□□□ 0.32
CDH8-208ENST00000582980 UBAP1LF5GYI3 381 aa17.05■□□□□ 0.32
CDH8-208ENST00000582980 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
CDH8-208ENST00000582980 PANK3Q9H999 370 aa17.05■□□□□ 0.32
CDH8-208ENST00000582980 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
CDH8-208ENST00000582980 KTN1Q86UP2 1357 aaKnown RBP17.03■□□□□ 0.32
CDH8-208ENST00000582980 ROBO1Q9Y6N7 1651 aa17.03■□□□□ 0.32
CDH8-208ENST00000582980 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.32
CDH8-208ENST00000582980 USP6P35125 1406 aa17.02■□□□□ 0.31
CDH8-208ENST00000582980 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.31
CDH8-208ENST00000582980 BRD4O60885 1362 aaPredicted RBP17.02■□□□□ 0.31
CDH8-208ENST00000582980 PSME1Q06323 249 aa17.01■□□□□ 0.31
CDH8-208ENST00000582980 NSD3Q9BZ95 1437 aa17.01■□□□□ 0.31
CDH8-208ENST00000582980 NHSL1Q5SYE7 1610 aa17■□□□□ 0.31
CDH8-208ENST00000582980 FOXO3O43524 673 aa17■□□□□ 0.31
CDH8-208ENST00000582980 NRKQ7Z2Y5 1582 aa17■□□□□ 0.31
CDH8-208ENST00000582980 KNSTRNQ9Y448 316 aa17■□□□□ 0.31
CDH8-208ENST00000582980 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
CDH8-208ENST00000582980 PIP4K2BP78356 416 aa16.98■□□□□ 0.31
CDH8-208ENST00000582980 CARD14Q9BXL6 1004 aa16.98■□□□□ 0.31
CDH8-208ENST00000582980 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
CDH8-208ENST00000582980 AHDC1Q5TGY3 1603 aaPredicted RBP16.97■□□□□ 0.31
CDH8-208ENST00000582980 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
CDH8-208ENST00000582980 KIF20BQ96Q89 1820 aa16.96■□□□□ 0.31
CDH8-208ENST00000582980 PER1O15534 1290 aaPredicted RBP16.96■□□□□ 0.31
CDH8-208ENST00000582980 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms