RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 ROBO2Q9HCK4 1378 aa23.33■■□□□ 1.33
IFT20-212ENST00000582797 CCDC125Q86Z20 511 aa23.32■■□□□ 1.32
IFT20-212ENST00000582797 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.32■■□□□ 1.32
IFT20-212ENST00000582797 GLI3P10071 1580 aa23.29■■□□□ 1.32
IFT20-212ENST00000582797 PXDNQ92626 1479 aa23.28■■□□□ 1.32
IFT20-212ENST00000582797 GJD4Q96KN9 370 aaPredicted RBP23.26■■□□□ 1.31
IFT20-212ENST00000582797 LRP5O75197 1615 aa23.26■■□□□ 1.31
IFT20-212ENST00000582797 BLMP54132 1417 aaPredicted RBP23.25■■□□□ 1.31
IFT20-212ENST00000582797 CDC42BPGQ6DT37 1551 aa23.24■■□□□ 1.31
IFT20-212ENST00000582797 ITGAEP38570 1179 aa23.24■■□□□ 1.31
IFT20-212ENST00000582797 PRAG1Q86YV5 1406 aa23.24■■□□□ 1.31
IFT20-212ENST00000582797 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
IFT20-212ENST00000582797 XPCQ01831 940 aaPredicted RBP23.23■■□□□ 1.31
IFT20-212ENST00000582797 DEFB132Q7Z7B7 95 aa23.22■■□□□ 1.31
IFT20-212ENST00000582797 ESCO1Q5FWF5 840 aa23.21■■□□□ 1.31
IFT20-212ENST00000582797 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
IFT20-212ENST00000582797 PPLO60437 1756 aa23.2■■□□□ 1.3
IFT20-212ENST00000582797 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
IFT20-212ENST00000582797 SLIT2O94813 1529 aa23.18■■□□□ 1.3
IFT20-212ENST00000582797 FOXO3O43524 673 aa23.17■■□□□ 1.3
IFT20-212ENST00000582797 USP32Q8NFA0 1604 aa23.17■■□□□ 1.3
IFT20-212ENST00000582797 UNC5CLQ8IV45 518 aa23.16■■□□□ 1.3
IFT20-212ENST00000582797 PLCH1Q4KWH8 1693 aa23.16■■□□□ 1.3
IFT20-212ENST00000582797 NUTM2FA1L443 756 aa23.13■■□□□ 1.29
IFT20-212ENST00000582797 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
IFT20-212ENST00000582797 NAIPQ13075 1403 aa23.12■■□□□ 1.29
IFT20-212ENST00000582797 FMN2Q9NZ56 1722 aa23.11■■□□□ 1.29
IFT20-212ENST00000582797 SF3B2Q13435 895 aaKnown RBP23.1■■□□□ 1.29
IFT20-212ENST00000582797 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
IFT20-212ENST00000582797 KIF1AQ12756 1690 aa23.09■■□□□ 1.29
IFT20-212ENST00000582797 RGPD8O14715 1765 aaPredicted RBP23.09■■□□□ 1.29
IFT20-212ENST00000582797 NWD2Q9ULI1 1742 aa23.09■■□□□ 1.29
IFT20-212ENST00000582797 PSDA5PKW4 1024 aaPredicted RBP23.09■■□□□ 1.29
IFT20-212ENST00000582797 SEPT12Q8IYM1 358 aa23.09■■□□□ 1.29
IFT20-212ENST00000582797 LRPPRCP42704 1394 aaKnown RBP23.08■■□□□ 1.29
IFT20-212ENST00000582797 SPATA31A3Q5VYP0 1347 aa23.07■■□□□ 1.28
IFT20-212ENST00000582797 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
IFT20-212ENST00000582797 WAPLQ7Z5K2 1190 aa23.04■■□□□ 1.28
IFT20-212ENST00000582797 IFT172Q9UG01 1749 aa23.04■■□□□ 1.28
IFT20-212ENST00000582797 RPGRIP1LQ68CZ1 1315 aa23.04■■□□□ 1.28
IFT20-212ENST00000582797 CCDC144AA2RUR9 1427 aa23.02■■□□□ 1.28
IFT20-212ENST00000582797 PLEKHG5O94827 1062 aa23.02■■□□□ 1.28
IFT20-212ENST00000582797 HRCP23327 699 aa23.02■■□□□ 1.28
IFT20-212ENST00000582797 VPS72Q15906 364 aa23.02■■□□□ 1.28
IFT20-212ENST00000582797 STK26Q9P289 416 aa23.02■■□□□ 1.28
IFT20-212ENST00000582797 PLEKHH1Q9ULM0 1364 aa23.01■■□□□ 1.27
IFT20-212ENST00000582797 TECPR2O15040 1411 aa23.01■■□□□ 1.27
IFT20-212ENST00000582797 KRT27Q7Z3Y8 459 aa23.01■■□□□ 1.27
IFT20-212ENST00000582797 CABLES1Q8TDN4 633 aa23.01■■□□□ 1.27
IFT20-212ENST00000582797 RGPD1P0DJD0 1748 aa23■■□□□ 1.27
IFT20-212ENST00000582797 NRAPQ86VF7 1730 aa23■■□□□ 1.27
IFT20-212ENST00000582797 CCDC9Q9Y3X0 531 aaKnown RBP23■■□□□ 1.27
IFT20-212ENST00000582797 KRT28Q7Z3Y7 464 aa22.99■■□□□ 1.27
IFT20-212ENST00000582797 TNS3Q68CZ2 1445 aa22.99■■□□□ 1.27
IFT20-212ENST00000582797 ONECUT3O60422 494 aaPredicted RBP22.98■■□□□ 1.27
IFT20-212ENST00000582797 HAP1P54257 671 aaPredicted RBP22.98■■□□□ 1.27
IFT20-212ENST00000582797 BAG6P46379 1132 aa22.96■■□□□ 1.27
IFT20-212ENST00000582797 PPARGC1BQ86YN6 1023 aaKnown RBP22.96■■□□□ 1.27
IFT20-212ENST00000582797 ADGRF5Q8IZF2 1346 aa22.96■■□□□ 1.27
IFT20-212ENST00000582797 TNS1Q9HBL0 1735 aaKnown RBP22.95■■□□□ 1.26
IFT20-212ENST00000582797 RRBP1Q9P2E9 1410 aaKnown RBP22.95■■□□□ 1.26
IFT20-212ENST00000582797 A0A0G2JS52 829 aa22.94■■□□□ 1.26
IFT20-212ENST00000582797 MYT1Q01538 1121 aa22.94■■□□□ 1.26
IFT20-212ENST00000582797 TMEM132EQ6IEE7 984 aa22.92■■□□□ 1.26
IFT20-212ENST00000582797 ABCC11Q96J66 1382 aa22.91■■□□□ 1.26
IFT20-212ENST00000582797 EN1Q05925 392 aaPredicted RBP22.91■■□□□ 1.26
IFT20-212ENST00000582797 R3HDM1Q15032 1099 aaKnown RBP22.9■■□□□ 1.26
IFT20-212ENST00000582797 FAM98CQ17RN3 349 aaKnown RBP22.9■■□□□ 1.26
IFT20-212ENST00000582797 FAM182BQ5T319 152 aa22.89■■□□□ 1.25
IFT20-212ENST00000582797 LMOD2Q6P5Q4 547 aa22.89■■□□□ 1.25
IFT20-212ENST00000582797 PHF8Q9UPP1 1060 aa22.89■■□□□ 1.25
IFT20-212ENST00000582797 NRXN1Q9ULB1 1477 aa22.88■■□□□ 1.25
IFT20-212ENST00000582797 FAM83GA6ND36 823 aa22.88■■□□□ 1.25
IFT20-212ENST00000582797 PSME1Q06323 249 aa22.87■■□□□ 1.25
IFT20-212ENST00000582797 SLC4A1APQ9BWU0 796 aaKnown RBP22.87■■□□□ 1.25
IFT20-212ENST00000582797 YTHDC2Q9H6S0 1430 aaKnown RBP22.87■■□□□ 1.25
IFT20-212ENST00000582797 SBNO1A3KN83 1393 aa22.87■■□□□ 1.25
IFT20-212ENST00000582797 COL14A1Q05707 1796 aaKnown RBP22.86■■□□□ 1.25
IFT20-212ENST00000582797 TRPM3Q9HCF6 1732 aaPredicted RBP22.86■■□□□ 1.25
IFT20-212ENST00000582797 THSD7AQ9UPZ6 1657 aa22.85■■□□□ 1.25
IFT20-212ENST00000582797 RGL3Q3MIN7 710 aa22.85■■□□□ 1.25
IFT20-212ENST00000582797 ARHGEF10O15013 1369 aa22.85■■□□□ 1.25
IFT20-212ENST00000582797 PIK3C2GO75747 1445 aa22.84■■□□□ 1.25
IFT20-212ENST00000582797 SPATA31E1Q6ZUB1 1445 aa22.84■■□□□ 1.25
IFT20-212ENST00000582797 BTG4Q9NY30 223 aa22.83■■□□□ 1.25
IFT20-212ENST00000582797 ALS2Q96Q42 1657 aa22.83■■□□□ 1.24
IFT20-212ENST00000582797 CRYBG1Q9Y4K1 1723 aa22.82■■□□□ 1.24
IFT20-212ENST00000582797 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
IFT20-212ENST00000582797 ADGRB2O60241 1585 aa22.8■■□□□ 1.24
IFT20-212ENST00000582797 ANKRD30BQ9BXX2 1392 aa22.8■■□□□ 1.24
IFT20-212ENST00000582797 EZH2Q15910 746 aaKnown RBP22.79■■□□□ 1.24
IFT20-212ENST00000582797 PMFBP1Q8TBY8 1022 aa22.78■■□□□ 1.24
IFT20-212ENST00000582797 RREB1Q92766 1687 aa22.77■■□□□ 1.24
IFT20-212ENST00000582797 SAFB2Q14151 953 aaKnown RBP eCLIP22.76■■□□□ 1.23
IFT20-212ENST00000582797 NUP188Q5SRE5 1749 aa22.76■■□□□ 1.23
IFT20-212ENST00000582797 SPATA31A5Q5VU36 1347 aa22.76■■□□□ 1.23
IFT20-212ENST00000582797 SPATA31A7Q8IWB4 1347 aa22.76■■□□□ 1.23
IFT20-212ENST00000582797 SIRT1Q96EB6 747 aa22.75■■□□□ 1.23
IFT20-212ENST00000582797 YY1P25490 414 aa22.74■■□□□ 1.23
IFT20-212ENST00000582797 CAMKK2Q96RR4 588 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms