RNA–Protein interactions for RNA: ENST00000582723.1

APCDD1-205, Transcript of APC down-regulated 1, humanhuman

TSL 3

Gene APCDD1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APCDD1-205ENST00000582723 PNPLA6Q8IY17 1366 aa28.19■■■□□ 2.1
APCDD1-205ENST00000582723 MYOM2P54296 1465 aa28.19■■■□□ 2.1
APCDD1-205ENST00000582723 LAMC1P11047 1609 aa28.18■■■□□ 2.1
APCDD1-205ENST00000582723 YTHDC2Q9H6S0 1430 aaKnown RBP28.18■■■□□ 2.1
APCDD1-205ENST00000582723 NRXN1Q9ULB1 1477 aa28.17■■■□□ 2.1
APCDD1-205ENST00000582723 NUTM2FA1L443 756 aa28.17■■■□□ 2.1
APCDD1-205ENST00000582723 ACIN1Q9UKV3 1341 aaKnown RBP28.17■■■□□ 2.1
APCDD1-205ENST00000582723 LRRC59Q96AG4 307 aaKnown RBP28.16■■■□□ 2.1
APCDD1-205ENST00000582723 CFAP70Q5T0N1 1121 aa28.14■■■□□ 2.1
APCDD1-205ENST00000582723 ABCC11Q96J66 1382 aa28.13■■■□□ 2.09
APCDD1-205ENST00000582723 FMN2Q9NZ56 1722 aa28.11■■■□□ 2.09
APCDD1-205ENST00000582723 ESCO1Q5FWF5 840 aa28.1■■■□□ 2.09
APCDD1-205ENST00000582723 C14orf93Q9H972 538 aaKnown RBP28.1■■■□□ 2.09
APCDD1-205ENST00000582723 SOS2Q07890 1332 aaPredicted RBP28.09■■■□□ 2.09
APCDD1-205ENST00000582723 XPCQ01831 940 aaPredicted RBP28.08■■■□□ 2.09
APCDD1-205ENST00000582723 ZNF772Q68DY9 489 aaPredicted RBP28.07■■■□□ 2.08
APCDD1-205ENST00000582723 C8orf37Q96NL8 207 aa28.07■■■□□ 2.08
APCDD1-205ENST00000582723 AFF2P51816 1311 aa28.07■■■□□ 2.08
APCDD1-205ENST00000582723 SAFB2Q14151 953 aaKnown RBP eCLIP28.06■■■□□ 2.08
APCDD1-205ENST00000582723 PXDNQ92626 1479 aa28.05■■■□□ 2.08
APCDD1-205ENST00000582723 KDM2AQ9Y2K7 1162 aa28.05■■■□□ 2.08
APCDD1-205ENST00000582723 ADAMTS2O95450 1211 aa28.04■■■□□ 2.08
APCDD1-205ENST00000582723 DHX57Q6P158 1386 aaKnown RBP28.03■■■□□ 2.08
APCDD1-205ENST00000582723 RGPD8O14715 1765 aaPredicted RBP28.03■■■□□ 2.08
APCDD1-205ENST00000582723 ADGRB1O14514 1584 aa28.03■■■□□ 2.08
APCDD1-205ENST00000582723 FOXO3O43524 673 aa28.02■■■□□ 2.08
APCDD1-205ENST00000582723 COL22A1Q8NFW1 1626 aaPredicted RBP28.01■■■□□ 2.07
APCDD1-205ENST00000582723 NPHP3Q7Z494 1330 aa28■■■□□ 2.07
APCDD1-205ENST00000582723 DCAF11Q8TEB1 546 aa28■■■□□ 2.07
APCDD1-205ENST00000582723 PRAM1Q96QH2 718 aa28■■■□□ 2.07
APCDD1-205ENST00000582723 KIF1AQ12756 1690 aa27.98■■■□□ 2.07
APCDD1-205ENST00000582723 DLC1Q96QB1 1528 aa27.97■■■□□ 2.07
APCDD1-205ENST00000582723 HRCP23327 699 aa27.95■■■□□ 2.06
APCDD1-205ENST00000582723 RXRBP28702 533 aa27.95■■■□□ 2.06
APCDD1-205ENST00000582723 TRAK1Q9UPV9 953 aa27.94■■■□□ 2.06
APCDD1-205ENST00000582723 SIRT1Q96EB6 747 aa27.93■■■□□ 2.06
APCDD1-205ENST00000582723 NGLY1Q96IV0 654 aa27.93■■■□□ 2.06
APCDD1-205ENST00000582723 USP32Q8NFA0 1604 aa27.92■■■□□ 2.06
APCDD1-205ENST00000582723 POGKQ9P215 609 aa27.92■■■□□ 2.06
APCDD1-205ENST00000582723 ADGRB2O60241 1585 aa27.9■■■□□ 2.06
APCDD1-205ENST00000582723 HIRIP3Q9BW71 556 aaPredicted RBP27.9■■■□□ 2.06
APCDD1-205ENST00000582723 MARF1Q9Y4F3 1742 aaKnown RBP27.89■■■□□ 2.06
APCDD1-205ENST00000582723 RGS12O14924 1447 aa27.89■■■□□ 2.06
APCDD1-205ENST00000582723 QTRT2Q9H974 415 aaKnown RBP27.88■■■□□ 2.05
APCDD1-205ENST00000582723 ARHGEF28Q8N1W1 1705 aaKnown RBP27.87■■■□□ 2.05
APCDD1-205ENST00000582723 MINK1Q8N4C8 1332 aaPredicted RBP27.87■■■□□ 2.05
APCDD1-205ENST00000582723 PLEKHG5O94827 1062 aa27.86■■■□□ 2.05
APCDD1-205ENST00000582723 PHF8Q9UPP1 1060 aa27.86■■■□□ 2.05
APCDD1-205ENST00000582723 CDK12Q9NYV4 1490 aaPredicted RBP27.85■■■□□ 2.05
APCDD1-205ENST00000582723 KRT28Q7Z3Y7 464 aa27.84■■■□□ 2.05
APCDD1-205ENST00000582723 USP21Q9UK80 565 aa27.84■■■□□ 2.05
APCDD1-205ENST00000582723 SPATA31A3Q5VYP0 1347 aa27.83■■■□□ 2.05
APCDD1-205ENST00000582723 PMFBP1Q8TBY8 1022 aa27.82■■■□□ 2.04
APCDD1-205ENST00000582723 RBM6P78332 1123 aaKnown RBP27.81■■■□□ 2.04
APCDD1-205ENST00000582723 TNS3Q68CZ2 1445 aa27.81■■■□□ 2.04
APCDD1-205ENST00000582723 ANKARQ7Z5J8 1434 aa27.8■■■□□ 2.04
APCDD1-205ENST00000582723 ABCA3Q99758 1704 aa27.78■■■□□ 2.04
APCDD1-205ENST00000582723 TULP4Q9NRJ4 1543 aa27.78■■■□□ 2.04
APCDD1-205ENST00000582723 PRR36Q9H6K5 1346 aa27.78■■■□□ 2.04
APCDD1-205ENST00000582723 UPF1Q92900 1129 aaKnown RBP eCLIP27.78■■■□□ 2.04
APCDD1-205ENST00000582723 FNBP4Q8N3X1 1017 aaPredicted RBP27.77■■■□□ 2.04
APCDD1-205ENST00000582723 ATRNO75882 1429 aa27.76■■■□□ 2.04
APCDD1-205ENST00000582723 LMOD2Q6P5Q4 547 aa27.76■■■□□ 2.03
APCDD1-205ENST00000582723 CABLES1Q8TDN4 633 aa27.76■■■□□ 2.03
APCDD1-205ENST00000582723 BCL9LQ86UU0 1499 aa27.76■■■□□ 2.03
APCDD1-205ENST00000582723 TRPC5Q9UL62 973 aaPredicted RBP27.75■■■□□ 2.03
APCDD1-205ENST00000582723 TRPM3Q9HCF6 1732 aaPredicted RBP27.75■■■□□ 2.03
APCDD1-205ENST00000582723 PSME1Q06323 249 aa27.73■■■□□ 2.03
APCDD1-205ENST00000582723 STAC3Q96MF2 364 aa27.73■■■□□ 2.03
APCDD1-205ENST00000582723 KIAA1210Q9ULL0 1709 aa27.72■■■□□ 2.03
APCDD1-205ENST00000582723 WASLO00401 505 aaPredicted RBP27.72■■■□□ 2.03
APCDD1-205ENST00000582723 HAP1P54257 671 aaPredicted RBP27.71■■■□□ 2.03
APCDD1-205ENST00000582723 SBNO1A3KN83 1393 aa27.71■■■□□ 2.03
APCDD1-205ENST00000582723 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.7■■■□□ 2.03
APCDD1-205ENST00000582723 PLCH1Q4KWH8 1693 aa27.69■■■□□ 2.02
APCDD1-205ENST00000582723 NBPF1Q3BBV0 1214 aa27.69■■■□□ 2.02
APCDD1-205ENST00000582723 ATP7BP35670 1465 aa27.69■■■□□ 2.02
APCDD1-205ENST00000582723 EIF3AQ14152 1382 aaKnown RBP27.68■■■□□ 2.02
APCDD1-205ENST00000582723 ALS2Q96Q42 1657 aa27.68■■■□□ 2.02
APCDD1-205ENST00000582723 SLIT2O94813 1529 aa27.67■■■□□ 2.02
APCDD1-205ENST00000582723 ITSN1Q15811 1721 aa27.67■■■□□ 2.02
APCDD1-205ENST00000582723 ARHGEF10O15013 1369 aa27.65■■■□□ 2.02
APCDD1-205ENST00000582723 GLI3P10071 1580 aa27.65■■■□□ 2.02
APCDD1-205ENST00000582723 SIN3AQ96ST3 1273 aa27.64■■■□□ 2.02
APCDD1-205ENST00000582723 GPRASP1Q5JY77 1395 aa27.63■■■□□ 2.01
APCDD1-205ENST00000582723 TOPAZ1Q8N9V7 1692 aa27.63■■■□□ 2.01
APCDD1-205ENST00000582723 RALGAPBQ86X10 1494 aa27.62■■■□□ 2.01
APCDD1-205ENST00000582723 UNC5CLQ8IV45 518 aa27.61■■■□□ 2.01
APCDD1-205ENST00000582723 NGDNQ8NEJ9 315 aaKnown RBP27.61■■■□□ 2.01
APCDD1-205ENST00000582723 NUDT16Q96DE0 195 aaKnown RBP27.6■■■□□ 2.01
APCDD1-205ENST00000582723 GJD4Q96KN9 370 aaPredicted RBP27.6■■■□□ 2.01
APCDD1-205ENST00000582723 CRYBG1Q9Y4K1 1723 aa27.6■■■□□ 2.01
APCDD1-205ENST00000582723 L3MBTL2Q969R5 705 aa27.59■■■□□ 2.01
APCDD1-205ENST00000582723 CDK19Q9BWU1 502 aa27.59■■■□□ 2.01
APCDD1-205ENST00000582723 PAK3O75914 559 aaPredicted RBP27.58■■■□□ 2.01
APCDD1-205ENST00000582723 NEUROD1Q13562 356 aa27.58■■■□□ 2.01
APCDD1-205ENST00000582723 QRICH2Q9H0J4 1663 aa27.58■■■□□ 2.01
APCDD1-205ENST00000582723 ATAD2Q6PL18 1390 aa27.58■■■□□ 2.01
APCDD1-205ENST00000582723 NWD2Q9ULI1 1742 aa27.58■■■□□ 2.01
APCDD1-205ENST00000582723 TRPM1Q7Z4N2 1603 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms