RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
TRAPPC8-211ENST00000582539 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
TRAPPC8-211ENST00000582539 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
TRAPPC8-211ENST00000582539 POLR3AO14802 1390 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC8-211ENST00000582539 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
TRAPPC8-211ENST00000582539 MROH2AA6NES4 1674 aa13.17□□□□□ -0.3
TRAPPC8-211ENST00000582539 PPLO60437 1756 aa13.17□□□□□ -0.3
TRAPPC8-211ENST00000582539 PIK3C2BO00750 1634 aa13.17□□□□□ -0.3
TRAPPC8-211ENST00000582539 CNGB1Q14028 1251 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC8-211ENST00000582539 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
TRAPPC8-211ENST00000582539 RUNDC1Q96C34 613 aa13.16□□□□□ -0.3
TRAPPC8-211ENST00000582539 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
TRAPPC8-211ENST00000582539 C11orf95C9JLR9 678 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC8-211ENST00000582539 STK26Q9P289 416 aa13.15□□□□□ -0.3
TRAPPC8-211ENST00000582539 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
TRAPPC8-211ENST00000582539 NSD3Q9BZ95 1437 aa13.14□□□□□ -0.31
TRAPPC8-211ENST00000582539 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
TRAPPC8-211ENST00000582539 ATP7BP35670 1465 aa13.14□□□□□ -0.31
TRAPPC8-211ENST00000582539 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
TRAPPC8-211ENST00000582539 DIP2AQ14689 1571 aa13.14□□□□□ -0.31
TRAPPC8-211ENST00000582539 NEXMIFQ5QGS0 1516 aa13.14□□□□□ -0.31
TRAPPC8-211ENST00000582539 ZNF428Q96B54 188 aa13.13□□□□□ -0.31
TRAPPC8-211ENST00000582539 COG3Q96JB2 828 aa13.13□□□□□ -0.31
TRAPPC8-211ENST00000582539 MED14O60244 1454 aa13.13□□□□□ -0.31
TRAPPC8-211ENST00000582539 ANKLE2Q86XL3 938 aa13.12□□□□□ -0.31
TRAPPC8-211ENST00000582539 TBX22Q9Y458 520 aa13.12□□□□□ -0.31
TRAPPC8-211ENST00000582539 TSPOAP1O95153 1857 aa13.12□□□□□ -0.31
TRAPPC8-211ENST00000582539 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
TRAPPC8-211ENST00000582539 TXNDC2Q86VQ3 553 aa13.12□□□□□ -0.31
TRAPPC8-211ENST00000582539 TMEM2Q9UHN6 1383 aa13.12□□□□□ -0.31
TRAPPC8-211ENST00000582539 WDR63Q8IWG1 891 aa13.11□□□□□ -0.31
TRAPPC8-211ENST00000582539 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
TRAPPC8-211ENST00000582539 USP32Q8NFA0 1604 aa13.11□□□□□ -0.31
TRAPPC8-211ENST00000582539 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC8-211ENST00000582539 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC8-211ENST00000582539 BLMP54132 1417 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC8-211ENST00000582539 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
TRAPPC8-211ENST00000582539 CCDC61Q9Y6R9 512 aa13.1□□□□□ -0.31
TRAPPC8-211ENST00000582539 TTC21AQ8NDW8 1320 aa13.1□□□□□ -0.31
TRAPPC8-211ENST00000582539 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC8-211ENST00000582539 CLTCQ00610 1675 aaKnown RBP13.09□□□□□ -0.31
TRAPPC8-211ENST00000582539 DAXXQ9UER7 740 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC8-211ENST00000582539 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
TRAPPC8-211ENST00000582539 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
TRAPPC8-211ENST00000582539 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC8-211ENST00000582539 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.32
TRAPPC8-211ENST00000582539 WASLO00401 505 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC8-211ENST00000582539 TMEM131LA2VDJ0 1609 aa13.07□□□□□ -0.32
TRAPPC8-211ENST00000582539 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
TRAPPC8-211ENST00000582539 IL16Q14005 1332 aa13.07□□□□□ -0.32
TRAPPC8-211ENST00000582539 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
TRAPPC8-211ENST00000582539 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC8-211ENST00000582539 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.324e-6■□□□□ 8.3
TRAPPC8-211ENST00000582539 TMEM132EQ6IEE7 984 aa13.05□□□□□ -0.32
TRAPPC8-211ENST00000582539 ALKQ9UM73 1620 aa13.05□□□□□ -0.32
TRAPPC8-211ENST00000582539 ANP32AP39687 249 aaKnown RBP13.04□□□□□ -0.32
TRAPPC8-211ENST00000582539 TECPR2O15040 1411 aa13.04□□□□□ -0.32
TRAPPC8-211ENST00000582539 RRP1P56182 461 aaKnown RBP13.04□□□□□ -0.32
TRAPPC8-211ENST00000582539 ADGRB1O14514 1584 aa13.04□□□□□ -0.32
TRAPPC8-211ENST00000582539 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
TRAPPC8-211ENST00000582539 FCHSD2O94868 740 aa13.03□□□□□ -0.32
TRAPPC8-211ENST00000582539 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
TRAPPC8-211ENST00000582539 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
TRAPPC8-211ENST00000582539 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
TRAPPC8-211ENST00000582539 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.32
TRAPPC8-211ENST00000582539 NKTRP30414 1462 aaKnown RBP13.02□□□□□ -0.32
TRAPPC8-211ENST00000582539 ANKARQ7Z5J8 1434 aa13.02□□□□□ -0.32
TRAPPC8-211ENST00000582539 U2SURPO15042 1029 aaKnown RBP13.02□□□□□ -0.32
TRAPPC8-211ENST00000582539 FBXO31Q5XUX0 539 aaPredicted RBP13.02□□□□□ -0.32
TRAPPC8-211ENST00000582539 PMFBP1Q8TBY8 1022 aa13.02□□□□□ -0.32
TRAPPC8-211ENST00000582539 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
TRAPPC8-211ENST00000582539 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
TRAPPC8-211ENST00000582539 UPF2Q9HAU5 1272 aaKnown RBP13□□□□□ -0.33
TRAPPC8-211ENST00000582539 PDE3AQ14432 1141 aa13□□□□□ -0.33
TRAPPC8-211ENST00000582539 DDRGK1Q96HY6 314 aa13□□□□□ -0.33
TRAPPC8-211ENST00000582539 NUDT16Q96DE0 195 aaKnown RBP13□□□□□ -0.33
TRAPPC8-211ENST00000582539 SLC12A5Q9H2X9 1139 aa12.99□□□□□ -0.33
TRAPPC8-211ENST00000582539 AATKQ6ZMQ8 1374 aa12.99□□□□□ -0.33
TRAPPC8-211ENST00000582539 KIF16BQ96L93 1317 aa12.99□□□□□ -0.33
TRAPPC8-211ENST00000582539 PTCH1Q13635 1447 aa12.99□□□□□ -0.33
TRAPPC8-211ENST00000582539 GNAI1P63096 354 aa12.99□□□□□ -0.33
TRAPPC8-211ENST00000582539 SAFB2Q14151 953 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAPPC8-211ENST00000582539 KIF13AQ9H1H9 1805 aa12.98□□□□□ -0.33
TRAPPC8-211ENST00000582539 ADAMTS8Q9UP79 889 aa12.98□□□□□ -0.33
TRAPPC8-211ENST00000582539 MTHFSP49914 203 aa12.98□□□□□ -0.33
TRAPPC8-211ENST00000582539 PSME1Q06323 249 aa12.98□□□□□ -0.33
TRAPPC8-211ENST00000582539 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
TRAPPC8-211ENST00000582539 KNDC1Q76NI1 1749 aa12.98□□□□□ -0.33
TRAPPC8-211ENST00000582539 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
TRAPPC8-211ENST00000582539 SOS1Q07889 1333 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC8-211ENST00000582539 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC8-211ENST00000582539 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.33
TRAPPC8-211ENST00000582539 NUTM2DQ5VT03 806 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC8-211ENST00000582539 CPS1P31327 1500 aa12.96□□□□□ -0.33
TRAPPC8-211ENST00000582539 SLIT1O75093 1534 aa12.96□□□□□ -0.33
TRAPPC8-211ENST00000582539 KCNH5Q8NCM2 988 aa12.96□□□□□ -0.33
TRAPPC8-211ENST00000582539 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.33
TRAPPC8-211ENST00000582539 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.34
TRAPPC8-211ENST00000582539 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
TRAPPC8-211ENST00000582539 GAS2L2Q8NHY3 880 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms