RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 MPHOSPH9Q99550 1183 aa21.67■■□□□ 1.06
CDC42EP4-208ENST00000582303 LAMC1P11047 1609 aa21.66■■□□□ 1.06
CDC42EP4-208ENST00000582303 RGL3Q3MIN7 710 aa21.66■■□□□ 1.06
CDC42EP4-208ENST00000582303 ESCO1Q5FWF5 840 aa21.66■■□□□ 1.06
CDC42EP4-208ENST00000582303 PPLO60437 1756 aa21.65■■□□□ 1.06
CDC42EP4-208ENST00000582303 ADGRF5Q8IZF2 1346 aa21.64■■□□□ 1.05
CDC42EP4-208ENST00000582303 CDC42BPGQ6DT37 1551 aa21.63■■□□□ 1.05
CDC42EP4-208ENST00000582303 TECPR2O15040 1411 aa21.63■■□□□ 1.05
CDC42EP4-208ENST00000582303 SPATA31E1Q6ZUB1 1445 aa21.63■■□□□ 1.05
CDC42EP4-208ENST00000582303 ABCC11Q96J66 1382 aa21.62■■□□□ 1.05
CDC42EP4-208ENST00000582303 STK26Q9P289 416 aa21.62■■□□□ 1.05
CDC42EP4-208ENST00000582303 USP21Q9UK80 565 aa21.62■■□□□ 1.05
CDC42EP4-208ENST00000582303 TRPC5Q9UL62 973 aaPredicted RBP21.62■■□□□ 1.05
CDC42EP4-208ENST00000582303 FNBP4Q8N3X1 1017 aaPredicted RBP21.6■■□□□ 1.05
CDC42EP4-208ENST00000582303 RGS12O14924 1447 aa21.58■■□□□ 1.05
CDC42EP4-208ENST00000582303 FOXO3O43524 673 aa21.58■■□□□ 1.05
CDC42EP4-208ENST00000582303 PIK3C2GO75747 1445 aa21.57■■□□□ 1.04
CDC42EP4-208ENST00000582303 WAPLQ7Z5K2 1190 aa21.57■■□□□ 1.04
CDC42EP4-208ENST00000582303 SIRT1Q96EB6 747 aa21.57■■□□□ 1.04
CDC42EP4-208ENST00000582303 ATAD2Q6PL18 1390 aa21.55■■□□□ 1.04
CDC42EP4-208ENST00000582303 TMEM132EQ6IEE7 984 aa21.54■■□□□ 1.04
CDC42EP4-208ENST00000582303 YTHDC2Q9H6S0 1430 aaKnown RBP21.54■■□□□ 1.04
CDC42EP4-208ENST00000582303 MYOM2P54296 1465 aa21.53■■□□□ 1.04
CDC42EP4-208ENST00000582303 COL22A1Q8NFW1 1626 aaPredicted RBP21.53■■□□□ 1.04
CDC42EP4-208ENST00000582303 PXDNQ92626 1479 aa21.52■■□□□ 1.04
CDC42EP4-208ENST00000582303 DHX57Q6P158 1386 aaKnown RBP21.52■■□□□ 1.04
CDC42EP4-208ENST00000582303 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
CDC42EP4-208ENST00000582303 C14orf93Q9H972 538 aaKnown RBP21.52■■□□□ 1.04
CDC42EP4-208ENST00000582303 XPCQ01831 940 aaPredicted RBP21.5■■□□□ 1.03
CDC42EP4-208ENST00000582303 ATRNO75882 1429 aa21.49■■□□□ 1.03
CDC42EP4-208ENST00000582303 PSME1Q06323 249 aa21.49■■□□□ 1.03
CDC42EP4-208ENST00000582303 KNDC1Q76NI1 1749 aa21.49■■□□□ 1.03
CDC42EP4-208ENST00000582303 PLEKHH1Q9ULM0 1364 aa21.48■■□□□ 1.03
CDC42EP4-208ENST00000582303 IFT172Q9UG01 1749 aa21.47■■□□□ 1.03
CDC42EP4-208ENST00000582303 SPATA31A3Q5VYP0 1347 aa21.47■■□□□ 1.03
CDC42EP4-208ENST00000582303 KRT28Q7Z3Y7 464 aa21.46■■□□□ 1.03
CDC42EP4-208ENST00000582303 HAP1P54257 671 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP4-208ENST00000582303 CCDC125Q86Z20 511 aa21.45■■□□□ 1.02
CDC42EP4-208ENST00000582303 GJD4Q96KN9 370 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP4-208ENST00000582303 NRXN1Q9ULB1 1477 aa21.45■■□□□ 1.02
CDC42EP4-208ENST00000582303 KIF1AQ12756 1690 aa21.44■■□□□ 1.02
CDC42EP4-208ENST00000582303 CFAP70Q5T0N1 1121 aa21.44■■□□□ 1.02
CDC42EP4-208ENST00000582303 PHF8Q9UPP1 1060 aa21.44■■□□□ 1.02
CDC42EP4-208ENST00000582303 BCL9LQ86UU0 1499 aa21.44■■□□□ 1.02
CDC42EP4-208ENST00000582303 POGKQ9P215 609 aa21.43■■□□□ 1.02
CDC42EP4-208ENST00000582303 UNC5CLQ8IV45 518 aa21.42■■□□□ 1.02
CDC42EP4-208ENST00000582303 STAC3Q96MF2 364 aa21.42■■□□□ 1.02
CDC42EP4-208ENST00000582303 PRAM1Q96QH2 718 aa21.42■■□□□ 1.02
CDC42EP4-208ENST00000582303 FMN2Q9NZ56 1722 aa21.41■■□□□ 1.02
CDC42EP4-208ENST00000582303 ARHGEF10O15013 1369 aa21.4■■□□□ 1.02
CDC42EP4-208ENST00000582303 TNS3Q68CZ2 1445 aa21.39■■□□□ 1.02
CDC42EP4-208ENST00000582303 EIF3AQ14152 1382 aaKnown RBP21.39■■□□□ 1.02
CDC42EP4-208ENST00000582303 RAB3GAP2Q9H2M9 1393 aa21.39■■□□□ 1.02
CDC42EP4-208ENST00000582303 SBNO1A3KN83 1393 aa21.38■■□□□ 1.01
CDC42EP4-208ENST00000582303 ANKARQ7Z5J8 1434 aa21.38■■□□□ 1.01
CDC42EP4-208ENST00000582303 SAFB2Q14151 953 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDC42EP4-208ENST00000582303 DLC1Q96QB1 1528 aa21.37■■□□□ 1.01
CDC42EP4-208ENST00000582303 SLIT2O94813 1529 aa21.36■■□□□ 1.01
CDC42EP4-208ENST00000582303 LMOD2Q6P5Q4 547 aa21.36■■□□□ 1.01
CDC42EP4-208ENST00000582303 SRCAPQ6ZRS2 3230 aa21.35■■□□□ 1.01
CDC42EP4-208ENST00000582303 EP400Q96L91 3159 aa21.35■■□□□ 1.01
CDC42EP4-208ENST00000582303 ZRANB1Q9UGI0 708 aa21.35■■□□□ 1.01
CDC42EP4-208ENST00000582303 MARF1Q9Y4F3 1742 aaKnown RBP21.34■■□□□ 1.01
CDC42EP4-208ENST00000582303 GPRASP1Q5JY77 1395 aa21.33■■□□□ 1
CDC42EP4-208ENST00000582303 RALGAPBQ86X10 1494 aa21.32■■□□□ 1
CDC42EP4-208ENST00000582303 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.32■■□□□ 1
CDC42EP4-208ENST00000582303 HRCP23327 699 aa21.32■■□□□ 1
CDC42EP4-208ENST00000582303 VPS72Q15906 364 aa21.32■■□□□ 1
CDC42EP4-208ENST00000582303 DCAF11Q8TEB1 546 aa21.32■■□□□ 1
CDC42EP4-208ENST00000582303 USP32Q8NFA0 1604 aa21.32■■□□□ 1
CDC42EP4-208ENST00000582303 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
CDC42EP4-208ENST00000582303 PMFBP1Q8TBY8 1022 aa21.3■■□□□ 1
CDC42EP4-208ENST00000582303 CCDC9Q9Y3X0 531 aaKnown RBP21.3■■□□□ 1
CDC42EP4-208ENST00000582303 SF3B2Q13435 895 aaKnown RBP21.29■■□□□ 1
CDC42EP4-208ENST00000582303 CABLES1Q8TDN4 633 aa21.29■■□□□ 1
CDC42EP4-208ENST00000582303 KDM2AQ9Y2K7 1162 aa21.29■■□□□ 1
CDC42EP4-208ENST00000582303 ADGRB2O60241 1585 aa21.28■■□□□ 1
CDC42EP4-208ENST00000582303 BLMP54132 1417 aaPredicted RBP21.28■■□□□ 1
CDC42EP4-208ENST00000582303 ADGRB1O14514 1584 aa21.27■■□□□ 1
CDC42EP4-208ENST00000582303 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP4-208ENST00000582303 PLEKHG5O94827 1062 aa21.26■□□□□ 0.99
CDC42EP4-208ENST00000582303 SEPT12Q8IYM1 358 aa21.26■□□□□ 0.99
CDC42EP4-208ENST00000582303 HIRIP3Q9BW71 556 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP4-208ENST00000582303 MINK1Q8N4C8 1332 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP4-208ENST00000582303 NGDNQ8NEJ9 315 aaKnown RBP21.25■□□□□ 0.99
CDC42EP4-208ENST00000582303 ONECUT3O60422 494 aaPredicted RBP21.24■□□□□ 0.99
CDC42EP4-208ENST00000582303 GLI3P10071 1580 aa21.23■□□□□ 0.99
CDC42EP4-208ENST00000582303 TULP4Q9NRJ4 1543 aa21.23■□□□□ 0.99
CDC42EP4-208ENST00000582303 FAM83GA6ND36 823 aa21.22■□□□□ 0.99
CDC42EP4-208ENST00000582303 KRT27Q7Z3Y8 459 aa21.22■□□□□ 0.99
CDC42EP4-208ENST00000582303 NWD2Q9ULI1 1742 aa21.21■□□□□ 0.99
CDC42EP4-208ENST00000582303 A0A0G2JS52 829 aa21.21■□□□□ 0.99
CDC42EP4-208ENST00000582303 MYT1Q01538 1121 aa21.21■□□□□ 0.99
CDC42EP4-208ENST00000582303 RGPD8O14715 1765 aaPredicted RBP21.2■□□□□ 0.98
CDC42EP4-208ENST00000582303 PAK3O75914 559 aaPredicted RBP21.19■□□□□ 0.98
CDC42EP4-208ENST00000582303 BTG4Q9NY30 223 aa21.19■□□□□ 0.98
CDC42EP4-208ENST00000582303 PRR36Q9H6K5 1346 aa21.18■□□□□ 0.98
CDC42EP4-208ENST00000582303 PLCH1Q4KWH8 1693 aa21.16■□□□□ 0.98
CDC42EP4-208ENST00000582303 NUDT16Q96DE0 195 aaKnown RBP21.15■□□□□ 0.98
CDC42EP4-208ENST00000582303 PRDM11Q9NQV5 511 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms