RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 ADAMTS13Q76LX8 1427 aa9.84□□□□□ -0.83
TVP23B-210ENST00000582288 PPP1R15AO75807 674 aaPredicted RBP9.84□□□□□ -0.83
TVP23B-210ENST00000582288 LRRC59Q96AG4 307 aaKnown RBP9.84□□□□□ -0.83
TVP23B-210ENST00000582288 NGLY1Q96IV0 654 aa9.84□□□□□ -0.83
TVP23B-210ENST00000582288 QTRT2Q9H974 415 aaKnown RBP9.83□□□□□ -0.84
TVP23B-210ENST00000582288 ATAD2Q6PL18 1390 aa9.83□□□□□ -0.84
TVP23B-210ENST00000582288 ASXL1Q8IXJ9 1541 aa9.82□□□□□ -0.84
TVP23B-210ENST00000582288 NHSL1Q5SYE7 1610 aa9.82□□□□□ -0.84
TVP23B-210ENST00000582288 PTPN23Q9H3S7 1636 aa9.82□□□□□ -0.84
TVP23B-210ENST00000582288 KANK4Q5T7N3 995 aaPredicted RBP9.82□□□□□ -0.84
TVP23B-210ENST00000582288 TRPM2O94759 1503 aa9.82□□□□□ -0.84
TVP23B-210ENST00000582288 GCC2Q8IWJ2 1684 aa9.81□□□□□ -0.84
TVP23B-210ENST00000582288 ADGRL2O95490 1459 aa9.81□□□□□ -0.84
TVP23B-210ENST00000582288 NUTM2BA6NNL0 878 aaPredicted RBP9.81□□□□□ -0.84
TVP23B-210ENST00000582288 NUTM2EB1AL46 878 aaPredicted RBP9.81□□□□□ -0.84
TVP23B-210ENST00000582288 CCDC125Q86Z20 511 aa9.81□□□□□ -0.84
TVP23B-210ENST00000582288 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
TVP23B-210ENST00000582288 ZRANB1Q9UGI0 708 aa9.81□□□□□ -0.84
TVP23B-210ENST00000582288 FARP1Q9Y4F1 1045 aaPredicted RBP9.81□□□□□ -0.84
TVP23B-210ENST00000582288 MST1RQ04912 1400 aa9.8□□□□□ -0.84
TVP23B-210ENST00000582288 EP400Q96L91 3159 aa9.79□□□□□ -0.84
TVP23B-210ENST00000582288 NUTM2DQ5VT03 806 aaPredicted RBP9.79□□□□□ -0.84
TVP23B-210ENST00000582288 AMOTL2Q9Y2J4 779 aa9.79□□□□□ -0.84
TVP23B-210ENST00000582288 MYO5BQ9ULV0 1848 aa9.79□□□□□ -0.84
TVP23B-210ENST00000582288 PNPLA6Q8IY17 1366 aa9.78□□□□□ -0.84
TVP23B-210ENST00000582288 C8orf37Q96NL8 207 aa9.78□□□□□ -0.84
TVP23B-210ENST00000582288 LAMC1P11047 1609 aa9.78□□□□□ -0.84
TVP23B-210ENST00000582288 XRN1Q8IZH2 1706 aaKnown RBP9.77□□□□□ -0.85
TVP23B-210ENST00000582288 PTPRUQ92729 1446 aa9.77□□□□□ -0.85
TVP23B-210ENST00000582288 ANKRD50Q9ULJ7 1429 aa9.77□□□□□ -0.85
TVP23B-210ENST00000582288 FNBP4Q8N3X1 1017 aaPredicted RBP9.77□□□□□ -0.85
TVP23B-210ENST00000582288 TRPC5Q9UL62 973 aaPredicted RBP9.77□□□□□ -0.85
TVP23B-210ENST00000582288 UNC13BO14795 1591 aa9.76□□□□□ -0.85
TVP23B-210ENST00000582288 PTCH1Q13635 1447 aa9.76□□□□□ -0.85
TVP23B-210ENST00000582288 ATXN8OSP0DMR3 200 aa9.76□□□□□ -0.85
TVP23B-210ENST00000582288 ZNF579Q8NAF0 562 aaKnown RBP9.76□□□□□ -0.85
TVP23B-210ENST00000582288 SETBP1Q9Y6X0 1596 aa9.75□□□□□ -0.85
TVP23B-210ENST00000582288 USP21Q9UK80 565 aa9.75□□□□□ -0.85
TVP23B-210ENST00000582288 CHIC2Q9UKJ5 165 aa9.75□□□□□ -0.85
TVP23B-210ENST00000582288 ADGRL3Q9HAR2 1447 aa9.74□□□□□ -0.85
TVP23B-210ENST00000582288 IQGAP3Q86VI3 1631 aa9.74□□□□□ -0.85
TVP23B-210ENST00000582288 ATRNO75882 1429 aa9.73□□□□□ -0.85
TVP23B-210ENST00000582288 CHGAP10645 457 aaKnown RBP9.73□□□□□ -0.85
TVP23B-210ENST00000582288 SOS2Q07890 1332 aaPredicted RBP9.73□□□□□ -0.85
TVP23B-210ENST00000582288 COL22A1Q8NFW1 1626 aaPredicted RBP9.72□□□□□ -0.85
TVP23B-210ENST00000582288 NRXN3Q9Y4C0 1643 aa9.72□□□□□ -0.85
TVP23B-210ENST00000582288 E9PCH4 1651 aa9.72□□□□□ -0.85
TVP23B-210ENST00000582288 ADAMTS2O95450 1211 aa9.71□□□□□ -0.86
TVP23B-210ENST00000582288 C1orf167Q5SNV9 1468 aa9.71□□□□□ -0.86
TVP23B-210ENST00000582288 POTEB2H3BUK9 544 aa9.7□□□□□ -0.86
TVP23B-210ENST00000582288 NALCNQ8IZF0 1738 aa9.7□□□□□ -0.86
TVP23B-210ENST00000582288 LRP5O75197 1615 aa9.69□□□□□ -0.86
TVP23B-210ENST00000582288 METP08581 1390 aa9.69□□□□□ -0.86
TVP23B-210ENST00000582288 BLMP54132 1417 aaPredicted RBP9.69□□□□□ -0.86
TVP23B-210ENST00000582288 BCL9LQ86UU0 1499 aa9.69□□□□□ -0.86
TVP23B-210ENST00000582288 PRAG1Q86YV5 1406 aa9.69□□□□□ -0.86
TVP23B-210ENST00000582288 DDX17Q92841 729 aaKnown RBP9.69□□□□□ -0.86
TVP23B-210ENST00000582288 MKRN4PQ13434 485 aaPredicted RBP9.68□□□□□ -0.86
TVP23B-210ENST00000582288 GJD4Q96KN9 370 aaPredicted RBP9.68□□□□□ -0.86
TVP23B-210ENST00000582288 SLC4A1APQ9BWU0 796 aaKnown RBP9.68□□□□□ -0.86
TVP23B-210ENST00000582288 MYOM2P54296 1465 aa9.67□□□□□ -0.86
TVP23B-210ENST00000582288 ROCK1Q13464 1354 aa9.67□□□□□ -0.86
TVP23B-210ENST00000582288 SPHKAPQ2M3C7 1700 aa9.67□□□□□ -0.86
TVP23B-210ENST00000582288 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.66□□□□□ -0.86
TVP23B-210ENST00000582288 MARF1Q9Y4F3 1742 aaKnown RBP9.65□□□□□ -0.86
TVP23B-210ENST00000582288 NPHP3Q7Z494 1330 aa9.64□□□□□ -0.87
TVP23B-210ENST00000582288 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
TVP23B-210ENST00000582288 ORAI2Q96SN7 254 aa9.64□□□□□ -0.87
TVP23B-210ENST00000582288 NUP155O75694 1391 aa9.63□□□□□ -0.87
TVP23B-210ENST00000582288 LRPPRCP42704 1394 aaKnown RBP9.63□□□□□ -0.87
TVP23B-210ENST00000582288 NEXMIFQ5QGS0 1516 aa9.63□□□□□ -0.87
TVP23B-210ENST00000582288 FAM50AQ14320 339 aaKnown RBP9.63□□□□□ -0.87
TVP23B-210ENST00000582288 HFM1A2PYH4 1435 aa9.63□□□□□ -0.87
TVP23B-210ENST00000582288 PXDNQ92626 1479 aa9.62□□□□□ -0.87
TVP23B-210ENST00000582288 SF3B2Q13435 895 aaKnown RBP9.62□□□□□ -0.87
TVP23B-210ENST00000582288 ZNF326Q5BKZ1 582 aaKnown RBP9.62□□□□□ -0.87
TVP23B-210ENST00000582288 UNC5CLQ8IV45 518 aa9.62□□□□□ -0.87
TVP23B-210ENST00000582288 SLIT2O94813 1529 aa9.61□□□□□ -0.87
TVP23B-210ENST00000582288 RALGAPBQ86X10 1494 aa9.61□□□□□ -0.87
TVP23B-210ENST00000582288 VGFO15240 615 aaPredicted RBP9.61□□□□□ -0.87
TVP23B-210ENST00000582288 ONECUT3O60422 494 aaPredicted RBP9.61□□□□□ -0.87
TVP23B-210ENST00000582288 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
TVP23B-210ENST00000582288 GLI3P10071 1580 aa9.61□□□□□ -0.87
TVP23B-210ENST00000582288 CDC42BPGQ6DT37 1551 aa9.61□□□□□ -0.87
TVP23B-210ENST00000582288 ROBO2Q9HCK4 1378 aa9.61□□□□□ -0.87
TVP23B-210ENST00000582288 LOC105371045A0A1W2PR82 267 aa9.59□□□□□ -0.87
TVP23B-210ENST00000582288 DEFB132Q7Z7B7 95 aa9.59□□□□□ -0.87
TVP23B-210ENST00000582288 RPGRIP1LQ68CZ1 1315 aa9.58□□□□□ -0.88
TVP23B-210ENST00000582288 VPS72Q15906 364 aa9.58□□□□□ -0.88
TVP23B-210ENST00000582288 ESCO1Q5FWF5 840 aa9.58□□□□□ -0.88
TVP23B-210ENST00000582288 HRCP23327 699 aa9.57□□□□□ -0.88
TVP23B-210ENST00000582288 BAG6P46379 1132 aa9.57□□□□□ -0.88
TVP23B-210ENST00000582288 SEPT12Q8IYM1 358 aa9.57□□□□□ -0.88
TVP23B-210ENST00000582288 SPATA31A3Q5VYP0 1347 aa9.56□□□□□ -0.88
TVP23B-210ENST00000582288 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
TVP23B-210ENST00000582288 FOXO3O43524 673 aa9.56□□□□□ -0.88
TVP23B-210ENST00000582288 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
TVP23B-210ENST00000582288 KRT27Q7Z3Y8 459 aa9.56□□□□□ -0.88
TVP23B-210ENST00000582288 KIF1BO60333 1816 aa9.56□□□□□ -0.88
TVP23B-210ENST00000582288 BRWD3Q6RI45 1802 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms