RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
TOP3A-212ENST00000582122 JCADQ9P266 1359 aa14.91□□□□□ -0.02
TOP3A-212ENST00000582122 CCER1Q8TC90 406 aaPredicted RBP14.91□□□□□ -0.02
TOP3A-212ENST00000582122 ASXL1Q8IXJ9 1541 aa14.91□□□□□ -0.02
TOP3A-212ENST00000582122 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
TOP3A-212ENST00000582122 POGKQ9P215 609 aa14.9□□□□□ -0.02
TOP3A-212ENST00000582122 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-212ENST00000582122 PHLPP1O60346 1717 aa14.87□□□□□ -0.03
TOP3A-212ENST00000582122 PRAM1Q96QH2 718 aa14.87□□□□□ -0.03
TOP3A-212ENST00000582122 TRAK1Q9UPV9 953 aa14.87□□□□□ -0.03
TOP3A-212ENST00000582122 WAPLQ7Z5K2 1190 aa14.86□□□□□ -0.03
TOP3A-212ENST00000582122 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
TOP3A-212ENST00000582122 CDC42BPGQ6DT37 1551 aa14.85□□□□□ -0.03
TOP3A-212ENST00000582122 ROCK2O75116 1388 aaKnown RBP14.85□□□□□ -0.03
TOP3A-212ENST00000582122 SPATA31A6Q5VVP1 1343 aa14.84□□□□□ -0.03
TOP3A-212ENST00000582122 MST1RQ04912 1400 aa14.83□□□□□ -0.03
TOP3A-212ENST00000582122 NALCNQ8IZF0 1738 aa14.83□□□□□ -0.03
TOP3A-212ENST00000582122 COL16A1Q07092 1604 aaPredicted RBP14.83□□□□□ -0.04
TOP3A-212ENST00000582122 NBPF1Q3BBV0 1214 aa14.82□□□□□ -0.04
TOP3A-212ENST00000582122 GPRASP1Q5JY77 1395 aa14.82□□□□□ -0.04
TOP3A-212ENST00000582122 SLC24A1O60721 1099 aa14.81□□□□□ -0.04
TOP3A-212ENST00000582122 ZNF772Q68DY9 489 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-212ENST00000582122 PLEKHH1Q9ULM0 1364 aa14.81□□□□□ -0.04
TOP3A-212ENST00000582122 TRPM1Q7Z4N2 1603 aa14.81□□□□□ -0.04
TOP3A-212ENST00000582122 MEX3CQ5U5Q3 659 aaKnown RBP14.8□□□□□ -0.04
TOP3A-212ENST00000582122 BRINP3Q76B58 766 aa14.8□□□□□ -0.04
TOP3A-212ENST00000582122 C1orf167Q5SNV9 1468 aa14.8□□□□□ -0.04
TOP3A-212ENST00000582122 AHDC1Q5TGY3 1603 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-212ENST00000582122 ADGRB2O60241 1585 aa14.79□□□□□ -0.04
TOP3A-212ENST00000582122 NBPF8Q3BBV2 869 aa14.79□□□□□ -0.04
TOP3A-212ENST00000582122 RALGAPBQ86X10 1494 aa14.79□□□□□ -0.04
TOP3A-212ENST00000582122 CARD11Q9BXL7 1154 aa14.79□□□□□ -0.04
TOP3A-212ENST00000582122 CENPJQ9HC77 1338 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-212ENST00000582122 LRP6O75581 1613 aa14.78□□□□□ -0.04
TOP3A-212ENST00000582122 ANKARQ7Z5J8 1434 aa14.78□□□□□ -0.04
TOP3A-212ENST00000582122 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
TOP3A-212ENST00000582122 WASLO00401 505 aaPredicted RBP14.77□□□□□ -0.05
TOP3A-212ENST00000582122 ARHGEF28Q8N1W1 1705 aaKnown RBP14.77□□□□□ -0.05
TOP3A-212ENST00000582122 SHPRHQ149N8 1683 aa14.77□□□□□ -0.05
TOP3A-212ENST00000582122 MINK1Q8N4C8 1332 aaPredicted RBP14.76□□□□□ -0.05
TOP3A-212ENST00000582122 ESCO1Q5FWF5 840 aa14.76□□□□□ -0.05
TOP3A-212ENST00000582122 NPHP3Q7Z494 1330 aa14.75□□□□□ -0.05
TOP3A-212ENST00000582122 FMN2Q9NZ56 1722 aa14.75□□□□□ -0.05
TOP3A-212ENST00000582122 LRRC59Q96AG4 307 aaKnown RBP14.74□□□□□ -0.05
TOP3A-212ENST00000582122 CDK12Q9NYV4 1490 aaPredicted RBP14.74□□□□□ -0.05
TOP3A-212ENST00000582122 UPF1Q92900 1129 aaKnown RBP eCLIP14.73□□□□□ -0.05
TOP3A-212ENST00000582122 SBNO2Q9Y2G9 1366 aa14.73□□□□□ -0.05
TOP3A-212ENST00000582122 EVC2Q86UK5 1308 aa14.72□□□□□ -0.05
TOP3A-212ENST00000582122 ORAI2Q96SN7 254 aa14.72□□□□□ -0.05
TOP3A-212ENST00000582122 HIRIP3Q9BW71 556 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-212ENST00000582122 TULP4Q9NRJ4 1543 aa14.71□□□□□ -0.05
TOP3A-212ENST00000582122 KIF1AQ12756 1690 aa14.71□□□□□ -0.05
TOP3A-212ENST00000582122 RXRBP28702 533 aa14.71□□□□□ -0.05
TOP3A-212ENST00000582122 CDK19Q9BWU1 502 aa14.71□□□□□ -0.05
TOP3A-212ENST00000582122 PHF8Q9UPP1 1060 aa14.71□□□□□ -0.05
TOP3A-212ENST00000582122 PSME1Q06323 249 aa14.7□□□□□ -0.06
TOP3A-212ENST00000582122 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
TOP3A-212ENST00000582122 NHSL1Q5SYE7 1610 aa14.7□□□□□ -0.06
TOP3A-212ENST00000582122 SOS2Q07890 1332 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-212ENST00000582122 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
TOP3A-212ENST00000582122 SRPK2P78362 688 aaKnown RBP14.69□□□□□ -0.06
TOP3A-212ENST00000582122 NUDT16Q96DE0 195 aaKnown RBP14.69□□□□□ -0.06
TOP3A-212ENST00000582122 FOXO3O43524 673 aa14.68□□□□□ -0.06
TOP3A-212ENST00000582122 QRICH2Q9H0J4 1663 aa14.68□□□□□ -0.06
TOP3A-212ENST00000582122 PUS7Q96PZ0 661 aaKnown RBP14.67□□□□□ -0.06
TOP3A-212ENST00000582122 NGDNQ8NEJ9 315 aaKnown RBP14.66□□□□□ -0.06
TOP3A-212ENST00000582122 ITSN1Q15811 1721 aa14.66□□□□□ -0.06
TOP3A-212ENST00000582122 ATAD2Q6PL18 1390 aa14.65□□□□□ -0.06
TOP3A-212ENST00000582122 PLEKHG3A1L390 1219 aa14.65□□□□□ -0.06
TOP3A-212ENST00000582122 AFF2P51816 1311 aa14.65□□□□□ -0.06
TOP3A-212ENST00000582122 ATP7BP35670 1465 aa14.64□□□□□ -0.07
TOP3A-212ENST00000582122 USP47Q96K76 1375 aa14.64□□□□□ -0.07
TOP3A-212ENST00000582122 NUTM2BA6NNL0 878 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-212ENST00000582122 NUTM2EB1AL46 878 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-212ENST00000582122 CDCA8Q53HL2 280 aa14.64□□□□□ -0.07
TOP3A-212ENST00000582122 KRT28Q7Z3Y7 464 aa14.64□□□□□ -0.07
TOP3A-212ENST00000582122 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-212ENST00000582122 PRR36Q9H6K5 1346 aa14.64□□□□□ -0.07
TOP3A-212ENST00000582122 SBNO1A3KN83 1393 aa14.63□□□□□ -0.07
TOP3A-212ENST00000582122 BRD4O60885 1362 aaPredicted RBP14.63□□□□□ -0.07
TOP3A-212ENST00000582122 PXDNQ92626 1479 aa14.63□□□□□ -0.07
TOP3A-212ENST00000582122 USP32Q8NFA0 1604 aa14.63□□□□□ -0.07
TOP3A-212ENST00000582122 ARHGEF10O15013 1369 aa14.62□□□□□ -0.07
TOP3A-212ENST00000582122 ST20-MTHFSA0A0A6YYL1 179 aa14.62□□□□□ -0.07
TOP3A-212ENST00000582122 PMFBP1Q8TBY8 1022 aa14.62□□□□□ -0.07
TOP3A-212ENST00000582122 CABP2Q9NPB3 220 aa14.62□□□□□ -0.07
TOP3A-212ENST00000582122 POLR3AO14802 1390 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-212ENST00000582122 RGS12O14924 1447 aa14.61□□□□□ -0.07
TOP3A-212ENST00000582122 RGPD8O14715 1765 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-212ENST00000582122 TMF1P82094 1093 aa14.61□□□□□ -0.07
TOP3A-212ENST00000582122 DDX17Q92841 729 aaKnown RBP14.61□□□□□ -0.07
TOP3A-212ENST00000582122 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-212ENST00000582122 SPATA31A3Q5VYP0 1347 aa14.61□□□□□ -0.07
TOP3A-212ENST00000582122 PNPLA6Q8IY17 1366 aa14.6□□□□□ -0.07
TOP3A-212ENST00000582122 RBM6P78332 1123 aaKnown RBP14.6□□□□□ -0.07
TOP3A-212ENST00000582122 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
TOP3A-212ENST00000582122 NINLQ9Y2I6 1382 aa14.6□□□□□ -0.07
TOP3A-212ENST00000582122 PPIP5K1Q6PFW1 1433 aa14.59□□□□□ -0.07
TOP3A-212ENST00000582122 C8orf37Q96NL8 207 aa14.59□□□□□ -0.07
TOP3A-212ENST00000582122 TESK2Q96S53 571 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms