RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 CDK12Q9NYV4 1490 aaPredicted RBP21.44■■□□□ 1.02
CCDC57-214ENST00000582040 RXRBP28702 533 aa21.43■■□□□ 1.02
CCDC57-214ENST00000582040 C8orf37Q96NL8 207 aa21.43■■□□□ 1.02
CCDC57-214ENST00000582040 LRPPRCP42704 1394 aaKnown RBP21.43■■□□□ 1.02
CCDC57-214ENST00000582040 STK26Q9P289 416 aa21.42■■□□□ 1.02
CCDC57-214ENST00000582040 COL22A1Q8NFW1 1626 aaPredicted RBP21.4■■□□□ 1.02
CCDC57-214ENST00000582040 ABCC11Q96J66 1382 aa21.38■■□□□ 1.01
CCDC57-214ENST00000582040 PLEKHH1Q9ULM0 1364 aa21.38■■□□□ 1.01
CCDC57-214ENST00000582040 ADAMTS2O95450 1211 aa21.38■■□□□ 1.01
CCDC57-214ENST00000582040 TMEM132EQ6IEE7 984 aa21.38■■□□□ 1.01
CCDC57-214ENST00000582040 WAPLQ7Z5K2 1190 aa21.38■■□□□ 1.01
CCDC57-214ENST00000582040 PXDNQ92626 1479 aa21.38■■□□□ 1.01
CCDC57-214ENST00000582040 FMN2Q9NZ56 1722 aa21.38■■□□□ 1.01
CCDC57-214ENST00000582040 RGS12O14924 1447 aa21.38■■□□□ 1.01
CCDC57-214ENST00000582040 YTHDC2Q9H6S0 1430 aaKnown RBP21.38■■□□□ 1.01
CCDC57-214ENST00000582040 ESCO1Q5FWF5 840 aa21.37■■□□□ 1.01
CCDC57-214ENST00000582040 NPHP3Q7Z494 1330 aa21.36■■□□□ 1.01
CCDC57-214ENST00000582040 UPF1Q92900 1129 aaKnown RBP eCLIP21.36■■□□□ 1.01
CCDC57-214ENST00000582040 MYOM2P54296 1465 aa21.36■■□□□ 1.01
CCDC57-214ENST00000582040 ACIN1Q9UKV3 1341 aaKnown RBP21.35■■□□□ 1.01
CCDC57-214ENST00000582040 NRXN1Q9ULB1 1477 aa21.35■■□□□ 1.01
CCDC57-214ENST00000582040 NGLY1Q96IV0 654 aa21.35■■□□□ 1.01
CCDC57-214ENST00000582040 RAB3GAP2Q9H2M9 1393 aa21.35■■□□□ 1.01
CCDC57-214ENST00000582040 NUTM2FA1L443 756 aa21.34■■□□□ 1.01
CCDC57-214ENST00000582040 RBM6P78332 1123 aaKnown RBP21.33■■□□□ 1.01
CCDC57-214ENST00000582040 QTRT2Q9H974 415 aaKnown RBP21.33■■□□□ 1.01
CCDC57-214ENST00000582040 KIF1AQ12756 1690 aa21.32■■□□□ 1
CCDC57-214ENST00000582040 XPCQ01831 940 aaPredicted RBP21.32■■□□□ 1
CCDC57-214ENST00000582040 FOXO3O43524 673 aa21.31■■□□□ 1
CCDC57-214ENST00000582040 MARF1Q9Y4F3 1742 aaKnown RBP21.29■■□□□ 1
CCDC57-214ENST00000582040 C14orf93Q9H972 538 aaKnown RBP21.29■■□□□ 1
CCDC57-214ENST00000582040 CFAP70Q5T0N1 1121 aa21.28■■□□□ 1
CCDC57-214ENST00000582040 USP21Q9UK80 565 aa21.28■■□□□ 1
CCDC57-214ENST00000582040 DHX57Q6P158 1386 aaKnown RBP21.26■□□□□ 0.99
CCDC57-214ENST00000582040 ATRNO75882 1429 aa21.25■□□□□ 0.99
CCDC57-214ENST00000582040 FNBP4Q8N3X1 1017 aaPredicted RBP21.25■□□□□ 0.99
CCDC57-214ENST00000582040 RGPD8O14715 1765 aaPredicted RBP21.25■□□□□ 0.99
CCDC57-214ENST00000582040 SIRT1Q96EB6 747 aa21.24■□□□□ 0.99
CCDC57-214ENST00000582040 TRPC5Q9UL62 973 aaPredicted RBP21.24■□□□□ 0.99
CCDC57-214ENST00000582040 DLC1Q96QB1 1528 aa21.24■□□□□ 0.99
CCDC57-214ENST00000582040 ADGRB1O14514 1584 aa21.23■□□□□ 0.99
CCDC57-214ENST00000582040 SAFB2Q14151 953 aaKnown RBP eCLIP21.21■□□□□ 0.99
CCDC57-214ENST00000582040 PRAM1Q96QH2 718 aa21.21■□□□□ 0.99
CCDC57-214ENST00000582040 ADGRB2O60241 1585 aa21.21■□□□□ 0.99
CCDC57-214ENST00000582040 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
CCDC57-214ENST00000582040 BCL9LQ86UU0 1499 aa21.2■□□□□ 0.98
CCDC57-214ENST00000582040 USP32Q8NFA0 1604 aa21.2■□□□□ 0.98
CCDC57-214ENST00000582040 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.19■□□□□ 0.98
CCDC57-214ENST00000582040 TNS3Q68CZ2 1445 aa21.19■□□□□ 0.98
CCDC57-214ENST00000582040 KRT28Q7Z3Y7 464 aa21.18■□□□□ 0.98
CCDC57-214ENST00000582040 PHF8Q9UPP1 1060 aa21.18■□□□□ 0.98
CCDC57-214ENST00000582040 ATAD2Q6PL18 1390 aa21.18■□□□□ 0.98
CCDC57-214ENST00000582040 ABCA3Q99758 1704 aa21.16■□□□□ 0.98
CCDC57-214ENST00000582040 ANKARQ7Z5J8 1434 aa21.16■□□□□ 0.98
CCDC57-214ENST00000582040 POGKQ9P215 609 aa21.16■□□□□ 0.98
CCDC57-214ENST00000582040 SLIT2O94813 1529 aa21.14■□□□□ 0.98
CCDC57-214ENST00000582040 KDM2AQ9Y2K7 1162 aa21.13■□□□□ 0.97
CCDC57-214ENST00000582040 GLI3P10071 1580 aa21.12■□□□□ 0.97
CCDC57-214ENST00000582040 PSME1Q06323 249 aa21.12■□□□□ 0.97
CCDC57-214ENST00000582040 DCAF11Q8TEB1 546 aa21.12■□□□□ 0.97
CCDC57-214ENST00000582040 TRAK1Q9UPV9 953 aa21.12■□□□□ 0.97
CCDC57-214ENST00000582040 PLCH1Q4KWH8 1693 aa21.12■□□□□ 0.97
CCDC57-214ENST00000582040 SBNO1A3KN83 1393 aa21.11■□□□□ 0.97
CCDC57-214ENST00000582040 HAP1P54257 671 aaPredicted RBP21.11■□□□□ 0.97
CCDC57-214ENST00000582040 TULP4Q9NRJ4 1543 aa21.1■□□□□ 0.97
CCDC57-214ENST00000582040 RALGAPBQ86X10 1494 aa21.1■□□□□ 0.97
CCDC57-214ENST00000582040 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
CCDC57-214ENST00000582040 PMFBP1Q8TBY8 1022 aa21.1■□□□□ 0.97
CCDC57-214ENST00000582040 GJD4Q96KN9 370 aaPredicted RBP21.1■□□□□ 0.97
CCDC57-214ENST00000582040 HIRIP3Q9BW71 556 aaPredicted RBP21.1■□□□□ 0.97
CCDC57-214ENST00000582040 ARHGEF10O15013 1369 aa21.1■□□□□ 0.97
CCDC57-214ENST00000582040 ARHGEF28Q8N1W1 1705 aaKnown RBP21.09■□□□□ 0.97
CCDC57-214ENST00000582040 TRPM3Q9HCF6 1732 aaPredicted RBP21.09■□□□□ 0.97
CCDC57-214ENST00000582040 MINK1Q8N4C8 1332 aaPredicted RBP21.09■□□□□ 0.97
CCDC57-214ENST00000582040 UNC5CLQ8IV45 518 aa21.09■□□□□ 0.97
CCDC57-214ENST00000582040 CABLES1Q8TDN4 633 aa21.09■□□□□ 0.97
CCDC57-214ENST00000582040 EIF3AQ14152 1382 aaKnown RBP21.09■□□□□ 0.97
CCDC57-214ENST00000582040 LMOD2Q6P5Q4 547 aa21.08■□□□□ 0.97
CCDC57-214ENST00000582040 NWD2Q9ULI1 1742 aa21.07■□□□□ 0.96
CCDC57-214ENST00000582040 HRCP23327 699 aa21.07■□□□□ 0.96
CCDC57-214ENST00000582040 PRR36Q9H6K5 1346 aa21.06■□□□□ 0.96
CCDC57-214ENST00000582040 ALS2Q96Q42 1657 aa21.05■□□□□ 0.96
CCDC57-214ENST00000582040 STAC3Q96MF2 364 aa21.05■□□□□ 0.96
CCDC57-214ENST00000582040 EP400Q96L91 3159 aa21.03■□□□□ 0.96
CCDC57-214ENST00000582040 GPRASP1Q5JY77 1395 aa21.02■□□□□ 0.96
CCDC57-214ENST00000582040 ITSN1Q15811 1721 aa21.02■□□□□ 0.96
CCDC57-214ENST00000582040 WASLO00401 505 aaPredicted RBP21.02■□□□□ 0.96
CCDC57-214ENST00000582040 BRWD3Q6RI45 1802 aa21.01■□□□□ 0.95
CCDC57-214ENST00000582040 ATP7BP35670 1465 aa21.01■□□□□ 0.95
CCDC57-214ENST00000582040 NRAPQ86VF7 1730 aa21.01■□□□□ 0.95
CCDC57-214ENST00000582040 CRYBG1Q9Y4K1 1723 aa21.01■□□□□ 0.95
CCDC57-214ENST00000582040 VPS72Q15906 364 aa20.99■□□□□ 0.95
CCDC57-214ENST00000582040 KIAA1210Q9ULL0 1709 aa20.98■□□□□ 0.95
CCDC57-214ENST00000582040 CCDC9Q9Y3X0 531 aaKnown RBP20.97■□□□□ 0.95
CCDC57-214ENST00000582040 COL14A1Q05707 1796 aaKnown RBP20.97■□□□□ 0.95
CCDC57-214ENST00000582040 TOPAZ1Q8N9V7 1692 aa20.96■□□□□ 0.95
CCDC57-214ENST00000582040 NGDNQ8NEJ9 315 aaKnown RBP20.96■□□□□ 0.95
CCDC57-214ENST00000582040 FAM83GA6ND36 823 aa20.95■□□□□ 0.94
CCDC57-214ENST00000582040 CCDC125Q86Z20 511 aa20.95■□□□□ 0.94
CCDC57-214ENST00000582040 SEPT12Q8IYM1 358 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms