RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 ATAD2Q6PL18 1390 aa9.39□□□□□ -0.91
CDK12-207ENST00000581963 PXDNQ92626 1479 aa9.39□□□□□ -0.91
CDK12-207ENST00000581963 KNDC1Q76NI1 1749 aa9.39□□□□□ -0.91
CDK12-207ENST00000581963 NAIPQ13075 1403 aa9.39□□□□□ -0.91
CDK12-207ENST00000581963 RGPD8O14715 1765 aaPredicted RBP9.38□□□□□ -0.91
CDK12-207ENST00000581963 USP21Q9UK80 565 aa9.38□□□□□ -0.91
CDK12-207ENST00000581963 FMN2Q9NZ56 1722 aa9.38□□□□□ -0.91
CDK12-207ENST00000581963 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
CDK12-207ENST00000581963 BCL9LQ86UU0 1499 aa9.37□□□□□ -0.91
CDK12-207ENST00000581963 FNBP4Q8N3X1 1017 aaPredicted RBP9.37□□□□□ -0.91
CDK12-207ENST00000581963 TRPC5Q9UL62 973 aaPredicted RBP9.37□□□□□ -0.91
CDK12-207ENST00000581963 PPARGC1BQ86YN6 1023 aaKnown RBP9.36□□□□□ -0.91
CDK12-207ENST00000581963 RRBP1Q9P2E9 1410 aaKnown RBP9.36□□□□□ -0.91
CDK12-207ENST00000581963 GLI3P10071 1580 aa9.36□□□□□ -0.91
CDK12-207ENST00000581963 ABCA3Q99758 1704 aa9.36□□□□□ -0.91
CDK12-207ENST00000581963 KIF1AQ12756 1690 aa9.36□□□□□ -0.91
CDK12-207ENST00000581963 VGFO15240 615 aaPredicted RBP9.35□□□□□ -0.91
CDK12-207ENST00000581963 PLCH1Q4KWH8 1693 aa9.35□□□□□ -0.91
CDK12-207ENST00000581963 USP32Q8NFA0 1604 aa9.34□□□□□ -0.91
CDK12-207ENST00000581963 RPGRIP1LQ68CZ1 1315 aa9.33□□□□□ -0.92
CDK12-207ENST00000581963 NPHP3Q7Z494 1330 aa9.33□□□□□ -0.92
CDK12-207ENST00000581963 TECPR2O15040 1411 aa9.33□□□□□ -0.92
CDK12-207ENST00000581963 NWD2Q9ULI1 1742 aa9.33□□□□□ -0.92
CDK12-207ENST00000581963 SLIT2O94813 1529 aa9.32□□□□□ -0.92
CDK12-207ENST00000581963 XPCQ01831 940 aaPredicted RBP9.32□□□□□ -0.92
CDK12-207ENST00000581963 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
CDK12-207ENST00000581963 RALGAPBQ86X10 1494 aa9.32□□□□□ -0.92
CDK12-207ENST00000581963 ZRANB1Q9UGI0 708 aa9.31□□□□□ -0.92
CDK12-207ENST00000581963 ADGRF5Q8IZF2 1346 aa9.31□□□□□ -0.92
CDK12-207ENST00000581963 PLEKHH1Q9ULM0 1364 aa9.3□□□□□ -0.92
CDK12-207ENST00000581963 FOXO3O43524 673 aa9.3□□□□□ -0.92
CDK12-207ENST00000581963 FOXD1Q16676 465 aa9.3□□□□□ -0.92
CDK12-207ENST00000581963 GJD4Q96KN9 370 aaPredicted RBP9.3□□□□□ -0.92
CDK12-207ENST00000581963 LRP5O75197 1615 aa9.3□□□□□ -0.92
CDK12-207ENST00000581963 SPATA31E1Q6ZUB1 1445 aa9.3□□□□□ -0.92
CDK12-207ENST00000581963 LRPPRCP42704 1394 aaKnown RBP9.29□□□□□ -0.92
CDK12-207ENST00000581963 NRAPQ86VF7 1730 aa9.29□□□□□ -0.92
CDK12-207ENST00000581963 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
CDK12-207ENST00000581963 WAPLQ7Z5K2 1190 aa9.29□□□□□ -0.92
CDK12-207ENST00000581963 CCDC125Q86Z20 511 aa9.29□□□□□ -0.92
CDK12-207ENST00000581963 SLC4A1APQ9BWU0 796 aaKnown RBP9.29□□□□□ -0.92
CDK12-207ENST00000581963 PIK3C2GO75747 1445 aa9.29□□□□□ -0.92
CDK12-207ENST00000581963 CCDC144AA2RUR9 1427 aa9.28□□□□□ -0.92
CDK12-207ENST00000581963 BLMP54132 1417 aaPredicted RBP9.28□□□□□ -0.92
CDK12-207ENST00000581963 SPATA31A3Q5VYP0 1347 aa9.28□□□□□ -0.92
CDK12-207ENST00000581963 TRPM3Q9HCF6 1732 aaPredicted RBP9.28□□□□□ -0.92
CDK12-207ENST00000581963 ABCC11Q96J66 1382 aa9.27□□□□□ -0.93
CDK12-207ENST00000581963 UNC5CLQ8IV45 518 aa9.27□□□□□ -0.93
CDK12-207ENST00000581963 STK26Q9P289 416 aa9.27□□□□□ -0.93
CDK12-207ENST00000581963 TNS3Q68CZ2 1445 aa9.27□□□□□ -0.93
CDK12-207ENST00000581963 YTHDC2Q9H6S0 1430 aaKnown RBP9.27□□□□□ -0.93
CDK12-207ENST00000581963 CRYBG1Q9Y4K1 1723 aa9.27□□□□□ -0.93
CDK12-207ENST00000581963 ALS2Q96Q42 1657 aa9.26□□□□□ -0.93
CDK12-207ENST00000581963 TMEM132EQ6IEE7 984 aa9.26□□□□□ -0.93
CDK12-207ENST00000581963 ANKRD30BQ9BXX2 1392 aa9.25□□□□□ -0.93
CDK12-207ENST00000581963 RGPD1P0DJD0 1748 aa9.25□□□□□ -0.93
CDK12-207ENST00000581963 DEFB132Q7Z7B7 95 aa9.25□□□□□ -0.93
CDK12-207ENST00000581963 NRXN1Q9ULB1 1477 aa9.25□□□□□ -0.93
CDK12-207ENST00000581963 ADGRB2O60241 1585 aa9.24□□□□□ -0.93
CDK12-207ENST00000581963 RGL3Q3MIN7 710 aa9.24□□□□□ -0.93
CDK12-207ENST00000581963 KRT28Q7Z3Y7 464 aa9.24□□□□□ -0.93
CDK12-207ENST00000581963 TNS1Q9HBL0 1735 aaKnown RBP9.24□□□□□ -0.93
CDK12-207ENST00000581963 COL14A1Q05707 1796 aaKnown RBP9.23□□□□□ -0.93
CDK12-207ENST00000581963 VPS72Q15906 364 aa9.23□□□□□ -0.93
CDK12-207ENST00000581963 SEPT12Q8IYM1 358 aa9.23□□□□□ -0.93
CDK12-207ENST00000581963 CABLES1Q8TDN4 633 aa9.23□□□□□ -0.93
CDK12-207ENST00000581963 PHF8Q9UPP1 1060 aa9.22□□□□□ -0.93
CDK12-207ENST00000581963 THSD7AQ9UPZ6 1657 aa9.22□□□□□ -0.93
CDK12-207ENST00000581963 SBNO1A3KN83 1393 aa9.22□□□□□ -0.93
CDK12-207ENST00000581963 DLC1Q96QB1 1528 aa9.21□□□□□ -0.93
CDK12-207ENST00000581963 ONECUT3O60422 494 aaPredicted RBP9.21□□□□□ -0.94
CDK12-207ENST00000581963 SIRT1Q96EB6 747 aa9.21□□□□□ -0.94
CDK12-207ENST00000581963 ADGRB1O14514 1584 aa9.2□□□□□ -0.94
CDK12-207ENST00000581963 ITSN1Q15811 1721 aa9.2□□□□□ -0.94
CDK12-207ENST00000581963 PLEKHG5O94827 1062 aa9.2□□□□□ -0.94
CDK12-207ENST00000581963 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
CDK12-207ENST00000581963 KRT27Q7Z3Y8 459 aa9.2□□□□□ -0.94
CDK12-207ENST00000581963 C14orf93Q9H972 538 aaKnown RBP9.2□□□□□ -0.94
CDK12-207ENST00000581963 ARHGEF10O15013 1369 aa9.2□□□□□ -0.94
CDK12-207ENST00000581963 ANKARQ7Z5J8 1434 aa9.2□□□□□ -0.94
CDK12-207ENST00000581963 PSME1Q06323 249 aa9.19□□□□□ -0.94
CDK12-207ENST00000581963 SF3B2Q13435 895 aaKnown RBP9.19□□□□□ -0.94
CDK12-207ENST00000581963 MPHOSPH9Q99550 1183 aa9.19□□□□□ -0.94
CDK12-207ENST00000581963 PHRF1Q9P1Y6 1649 aaKnown RBP9.19□□□□□ -0.94
CDK12-207ENST00000581963 ARHGEF28Q8N1W1 1705 aaKnown RBP9.19□□□□□ -0.94
CDK12-207ENST00000581963 PSDA5PKW4 1024 aaPredicted RBP9.18□□□□□ -0.94
CDK12-207ENST00000581963 FAM83GA6ND36 823 aa9.18□□□□□ -0.94
CDK12-207ENST00000581963 SAFB2Q14151 953 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDK12-207ENST00000581963 CFAP70Q5T0N1 1121 aa9.18□□□□□ -0.94
CDK12-207ENST00000581963 DHX57Q6P158 1386 aaKnown RBP9.18□□□□□ -0.94
CDK12-207ENST00000581963 LMOD2Q6P5Q4 547 aa9.18□□□□□ -0.94
CDK12-207ENST00000581963 PRAM1Q96QH2 718 aa9.18□□□□□ -0.94
CDK12-207ENST00000581963 CCDC9Q9Y3X0 531 aaKnown RBP9.18□□□□□ -0.94
CDK12-207ENST00000581963 RREB1Q92766 1687 aa9.17□□□□□ -0.94
CDK12-207ENST00000581963 TULP4Q9NRJ4 1543 aa9.17□□□□□ -0.94
CDK12-207ENST00000581963 PMFBP1Q8TBY8 1022 aa9.17□□□□□ -0.94
CDK12-207ENST00000581963 HRCP23327 699 aa9.16□□□□□ -0.94
CDK12-207ENST00000581963 BAG6P46379 1132 aa9.16□□□□□ -0.94
CDK12-207ENST00000581963 FAM98CQ17RN3 349 aaKnown RBP9.16□□□□□ -0.94
CDK12-207ENST00000581963 BTG4Q9NY30 223 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms