RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 GGT6Q6P531 493 aa17.6■□□□□ 0.41
RNF43-205ENST00000581868 USP19O94966 1318 aa17.6■□□□□ 0.41
RNF43-205ENST00000581868 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
RNF43-205ENST00000581868 MROH2AA6NES4 1674 aa17.6■□□□□ 0.41
RNF43-205ENST00000581868 RLBP1P12271 317 aa17.59■□□□□ 0.41
RNF43-205ENST00000581868 NUTM2DQ5VT03 806 aaPredicted RBP17.59■□□□□ 0.41
RNF43-205ENST00000581868 SBNO2Q9Y2G9 1366 aa17.59■□□□□ 0.41
RNF43-205ENST00000581868 NEURL4Q96JN8 1562 aa17.59■□□□□ 0.41
RNF43-205ENST00000581868 EFCAB6Q5THR3 1501 aa17.59■□□□□ 0.41
RNF43-205ENST00000581868 ABCA9Q8IUA7 1624 aa17.59■□□□□ 0.41
RNF43-205ENST00000581868 NINLQ9Y2I6 1382 aa17.59■□□□□ 0.41
RNF43-205ENST00000581868 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.4
RNF43-205ENST00000581868 PCDHB15Q9Y5E8 787 aa17.58■□□□□ 0.4
RNF43-205ENST00000581868 CFAP53Q96M91 514 aa17.57■□□□□ 0.4
RNF43-205ENST00000581868 NRXN1Q9ULB1 1477 aa17.57■□□□□ 0.4
RNF43-205ENST00000581868 PRKCSHP14314 528 aaPredicted RBP17.56■□□□□ 0.4
RNF43-205ENST00000581868 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
RNF43-205ENST00000581868 PPRC1Q5VV67 1664 aaKnown RBP17.56■□□□□ 0.4
RNF43-205ENST00000581868 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
RNF43-205ENST00000581868 WDR63Q8IWG1 891 aa17.55■□□□□ 0.4
RNF43-205ENST00000581868 CFAP65Q6ZU64 1925 aaKnown RBP17.55■□□□□ 0.4
RNF43-205ENST00000581868 U2AF1L5P0DN76 240 aaPredicted RBP17.55■□□□□ 0.4
RNF43-205ENST00000581868 U2AF1Q01081 240 aaKnown RBP eCLIP17.55■□□□□ 0.4
RNF43-205ENST00000581868 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
RNF43-205ENST00000581868 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
RNF43-205ENST00000581868 SHPRHQ149N8 1683 aa17.54■□□□□ 0.4
RNF43-205ENST00000581868 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
RNF43-205ENST00000581868 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
RNF43-205ENST00000581868 SLKQ9H2G2 1235 aaPredicted RBP17.53■□□□□ 0.4
RNF43-205ENST00000581868 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
RNF43-205ENST00000581868 BECN1Q14457 450 aa17.52■□□□□ 0.4
RNF43-205ENST00000581868 ADGRB3O60242 1522 aa17.52■□□□□ 0.4
RNF43-205ENST00000581868 ASXL2Q76L83 1435 aa17.52■□□□□ 0.39
RNF43-205ENST00000581868 KIDINS220Q9ULH0 1771 aa17.51■□□□□ 0.39
RNF43-205ENST00000581868 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
RNF43-205ENST00000581868 ANO8Q9HCE9 1232 aaPredicted RBP17.51■□□□□ 0.39
RNF43-205ENST00000581868 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
RNF43-205ENST00000581868 NPATQ14207 1427 aa17.51■□□□□ 0.39
RNF43-205ENST00000581868 IQSEC2Q5JU85 1478 aa17.51■□□□□ 0.39
RNF43-205ENST00000581868 SETBP1Q9Y6X0 1596 aa17.51■□□□□ 0.39
RNF43-205ENST00000581868 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
RNF43-205ENST00000581868 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
RNF43-205ENST00000581868 QRICH2Q9H0J4 1663 aa17.5■□□□□ 0.39
RNF43-205ENST00000581868 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
RNF43-205ENST00000581868 TSR2Q969E8 191 aaKnown RBP17.49■□□□□ 0.39
RNF43-205ENST00000581868 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
RNF43-205ENST00000581868 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
RNF43-205ENST00000581868 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
RNF43-205ENST00000581868 AAMPQ13685 434 aa17.48■□□□□ 0.39
RNF43-205ENST00000581868 FTSJ3Q8IY81 847 aaKnown RBP17.48■□□□□ 0.39
RNF43-205ENST00000581868 LMTK2Q8IWU2 1503 aa17.48■□□□□ 0.39
RNF43-205ENST00000581868 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
RNF43-205ENST00000581868 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
RNF43-205ENST00000581868 VIRMAQ69YN4 1812 aaKnown RBP17.46■□□□□ 0.39
RNF43-205ENST00000581868 ZKSCAN2Q63HK3 967 aa17.46■□□□□ 0.39
RNF43-205ENST00000581868 STK26Q9P289 416 aa17.46■□□□□ 0.39
RNF43-205ENST00000581868 RPGRIP1LQ68CZ1 1315 aa17.46■□□□□ 0.39
RNF43-205ENST00000581868 DZIP1LQ8IYY4 767 aaKnown RBP17.45■□□□□ 0.38
RNF43-205ENST00000581868 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
RNF43-205ENST00000581868 NLRP1Q9C000 1473 aa17.45■□□□□ 0.38
RNF43-205ENST00000581868 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
RNF43-205ENST00000581868 EXOSC9Q06265 439 aaKnown RBP17.44■□□□□ 0.38
RNF43-205ENST00000581868 TBC1D32Q96NH3 1257 aa17.44■□□□□ 0.38
RNF43-205ENST00000581868 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
RNF43-205ENST00000581868 PPLO60437 1756 aa17.44■□□□□ 0.38
RNF43-205ENST00000581868 ZC3H13Q5T200 1668 aaKnown RBP17.44■□□□□ 0.38
RNF43-205ENST00000581868 POGKQ9P215 609 aa17.44■□□□□ 0.38
RNF43-205ENST00000581868 VGFO15240 615 aaPredicted RBP17.43■□□□□ 0.38
RNF43-205ENST00000581868 SRPK2P78362 688 aaKnown RBP17.43■□□□□ 0.38
RNF43-205ENST00000581868 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
RNF43-205ENST00000581868 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
RNF43-205ENST00000581868 TBC1D2Q9BYX2 928 aa17.42■□□□□ 0.38
RNF43-205ENST00000581868 ITPRIPQ8IWB1 547 aa17.41■□□□□ 0.38
RNF43-205ENST00000581868 TULP4Q9NRJ4 1543 aa17.41■□□□□ 0.38
RNF43-205ENST00000581868 TMPOP42166 694 aaKnown RBP17.4■□□□□ 0.38
RNF43-205ENST00000581868 NSD2O96028 1365 aa17.4■□□□□ 0.38
RNF43-205ENST00000581868 TRIM27P14373 513 aa17.4■□□□□ 0.38
RNF43-205ENST00000581868 SSH1Q8WYL5 1049 aa17.4■□□□□ 0.38
RNF43-205ENST00000581868 GLI2P10070 1586 aa17.4■□□□□ 0.38
RNF43-205ENST00000581868 USP32Q8NFA0 1604 aa17.39■□□□□ 0.37
RNF43-205ENST00000581868 PUS7Q96PZ0 661 aaKnown RBP17.39■□□□□ 0.37
RNF43-205ENST00000581868 ANTXR1Q9H6X2 564 aa17.39■□□□□ 0.37
RNF43-205ENST00000581868 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.39■□□□□ 0.37
RNF43-205ENST00000581868 TRIM35Q9UPQ4 493 aa17.39■□□□□ 0.37
RNF43-205ENST00000581868 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
RNF43-205ENST00000581868 CD109Q6YHK3 1445 aa17.38■□□□□ 0.37
RNF43-205ENST00000581868 FRMPD1Q5SYB0 1578 aa17.38■□□□□ 0.37
RNF43-205ENST00000581868 A0A1W2PP64 1363 aa17.38■□□□□ 0.37
RNF43-205ENST00000581868 POGZQ7Z3K3 1410 aa17.38■□□□□ 0.37
RNF43-205ENST00000581868 RAPGEF3O95398 923 aa17.38■□□□□ 0.37
RNF43-205ENST00000581868 MFAP1P55081 439 aaKnown RBP17.38■□□□□ 0.37
RNF43-205ENST00000581868 NOB1Q9ULX3 412 aaKnown RBP17.37■□□□□ 0.37
RNF43-205ENST00000581868 MINK1Q8N4C8 1332 aaPredicted RBP17.37■□□□□ 0.37
RNF43-205ENST00000581868 IDI1Q13907 227 aa17.36■□□□□ 0.37
RNF43-205ENST00000581868 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
RNF43-205ENST00000581868 ABCC3O15438 1527 aa17.36■□□□□ 0.37
RNF43-205ENST00000581868 CT47B1P0C2W7 299 aaPredicted RBP17.36■□□□□ 0.37
RNF43-205ENST00000581868 RIPK4P57078 832 aa17.36■□□□□ 0.37
RNF43-205ENST00000581868 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
RNF43-205ENST00000581868 ZMYM3Q14202 1370 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms