RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 LRRC59Q96AG4 307 aaKnown RBP29.37■■■□□ 2.29
SNX11-209ENST00000581705 DDX17Q92841 729 aaKnown RBP29.37■■■□□ 2.29
SNX11-209ENST00000581705 ABCC11Q96J66 1382 aa29.36■■■□□ 2.29
SNX11-209ENST00000581705 TMEM132EQ6IEE7 984 aa29.36■■■□□ 2.29
SNX11-209ENST00000581705 STK26Q9P289 416 aa29.36■■■□□ 2.29
SNX11-209ENST00000581705 MEX3CQ5U5Q3 659 aaKnown RBP29.34■■■□□ 2.29
SNX11-209ENST00000581705 ORAI2Q96SN7 254 aa29.34■■■□□ 2.29
SNX11-209ENST00000581705 NRXN1Q9ULB1 1477 aa29.34■■■□□ 2.29
SNX11-209ENST00000581705 LAMC1P11047 1609 aa29.32■■■□□ 2.28
SNX11-209ENST00000581705 L3MBTL2Q969R5 705 aa29.32■■■□□ 2.28
SNX11-209ENST00000581705 C14orf93Q9H972 538 aaKnown RBP29.32■■■□□ 2.28
SNX11-209ENST00000581705 MYOM2P54296 1465 aa29.32■■■□□ 2.28
SNX11-209ENST00000581705 CDC42BPGQ6DT37 1551 aa29.32■■■□□ 2.28
SNX11-209ENST00000581705 WAPLQ7Z5K2 1190 aa29.31■■■□□ 2.28
SNX11-209ENST00000581705 YTHDC2Q9H6S0 1430 aaKnown RBP29.3■■■□□ 2.28
SNX11-209ENST00000581705 KNDC1Q76NI1 1749 aa29.3■■■□□ 2.28
SNX11-209ENST00000581705 NUTM2BA6NNL0 878 aaPredicted RBP29.29■■■□□ 2.28
SNX11-209ENST00000581705 NUTM2EB1AL46 878 aaPredicted RBP29.29■■■□□ 2.28
SNX11-209ENST00000581705 NUTM2AQ8IVF1 878 aaPredicted RBP29.29■■■□□ 2.28
SNX11-209ENST00000581705 PNPLA6Q8IY17 1366 aa29.28■■■□□ 2.28
SNX11-209ENST00000581705 SOS2Q07890 1332 aaPredicted RBP29.27■■■□□ 2.28
SNX11-209ENST00000581705 ZNF772Q68DY9 489 aaPredicted RBP29.27■■■□□ 2.28
SNX11-209ENST00000581705 PLEKHH1Q9ULM0 1364 aa29.26■■■□□ 2.27
SNX11-209ENST00000581705 CFAP70Q5T0N1 1121 aa29.26■■■□□ 2.27
SNX11-209ENST00000581705 SIRT1Q96EB6 747 aa29.26■■■□□ 2.27
SNX11-209ENST00000581705 STAC3Q96MF2 364 aa29.24■■■□□ 2.27
SNX11-209ENST00000581705 ESCO1Q5FWF5 840 aa29.22■■■□□ 2.27
SNX11-209ENST00000581705 NPHP3Q7Z494 1330 aa29.19■■■□□ 2.26
SNX11-209ENST00000581705 AFF2P51816 1311 aa29.16■■■□□ 2.26
SNX11-209ENST00000581705 NUTM2FA1L443 756 aa29.16■■■□□ 2.26
SNX11-209ENST00000581705 PXDNQ92626 1479 aa29.14■■■□□ 2.26
SNX11-209ENST00000581705 FMN2Q9NZ56 1722 aa29.14■■■□□ 2.26
SNX11-209ENST00000581705 FOXO3O43524 673 aa29.13■■■□□ 2.25
SNX11-209ENST00000581705 C8orf37Q96NL8 207 aa29.13■■■□□ 2.25
SNX11-209ENST00000581705 DCAF11Q8TEB1 546 aa29.12■■■□□ 2.25
SNX11-209ENST00000581705 ADGRB1O14514 1584 aa29.12■■■□□ 2.25
SNX11-209ENST00000581705 PRAM1Q96QH2 718 aa29.11■■■□□ 2.25
SNX11-209ENST00000581705 KDM2AQ9Y2K7 1162 aa29.11■■■□□ 2.25
SNX11-209ENST00000581705 DLC1Q96QB1 1528 aa29.11■■■□□ 2.25
SNX11-209ENST00000581705 ADAMTS2O95450 1211 aa29.1■■■□□ 2.25
SNX11-209ENST00000581705 RXRBP28702 533 aa29.1■■■□□ 2.25
SNX11-209ENST00000581705 COL22A1Q8NFW1 1626 aaPredicted RBP29.09■■■□□ 2.25
SNX11-209ENST00000581705 XPCQ01831 940 aaPredicted RBP29.08■■■□□ 2.25
SNX11-209ENST00000581705 SAFB2Q14151 953 aaKnown RBP eCLIP29.06■■■□□ 2.24
SNX11-209ENST00000581705 NGLY1Q96IV0 654 aa29.05■■■□□ 2.24
SNX11-209ENST00000581705 POGKQ9P215 609 aa29.05■■■□□ 2.24
SNX11-209ENST00000581705 KIF1AQ12756 1690 aa29.05■■■□□ 2.24
SNX11-209ENST00000581705 NBPF8Q3BBV2 869 aa29.04■■■□□ 2.24
SNX11-209ENST00000581705 RALGAPBQ86X10 1494 aa29.04■■■□□ 2.24
SNX11-209ENST00000581705 CDK12Q9NYV4 1490 aaPredicted RBP29.04■■■□□ 2.24
SNX11-209ENST00000581705 QTRT2Q9H974 415 aaKnown RBP29.03■■■□□ 2.24
SNX11-209ENST00000581705 TRAK1Q9UPV9 953 aa29.03■■■□□ 2.24
SNX11-209ENST00000581705 ZNF316A6NFI3 1004 aaPredicted RBP29■■■□□ 2.23
SNX11-209ENST00000581705 PHF8Q9UPP1 1060 aa29■■■□□ 2.23
SNX11-209ENST00000581705 FNBP4Q8N3X1 1017 aaPredicted RBP28.99■■■□□ 2.23
SNX11-209ENST00000581705 SPATA31A3Q5VYP0 1347 aa28.99■■■□□ 2.23
SNX11-209ENST00000581705 ADGRB2O60241 1585 aa28.99■■■□□ 2.23
SNX11-209ENST00000581705 RBM6P78332 1123 aaKnown RBP28.98■■■□□ 2.23
SNX11-209ENST00000581705 KRT28Q7Z3Y7 464 aa28.98■■■□□ 2.23
SNX11-209ENST00000581705 RGPD8O14715 1765 aaPredicted RBP28.98■■■□□ 2.23
SNX11-209ENST00000581705 ANKARQ7Z5J8 1434 aa28.96■■■□□ 2.23
SNX11-209ENST00000581705 TRPM1Q7Z4N2 1603 aa28.96■■■□□ 2.23
SNX11-209ENST00000581705 USP21Q9UK80 565 aa28.95■■■□□ 2.23
SNX11-209ENST00000581705 KIAA1210Q9ULL0 1709 aa28.94■■■□□ 2.22
SNX11-209ENST00000581705 HIRIP3Q9BW71 556 aaPredicted RBP28.94■■■□□ 2.22
SNX11-209ENST00000581705 USP32Q8NFA0 1604 aa28.93■■■□□ 2.22
SNX11-209ENST00000581705 GPRASP1Q5JY77 1395 aa28.92■■■□□ 2.22
SNX11-209ENST00000581705 MINK1Q8N4C8 1332 aaPredicted RBP28.92■■■□□ 2.22
SNX11-209ENST00000581705 PSME1Q06323 249 aa28.92■■■□□ 2.22
SNX11-209ENST00000581705 TRPC5Q9UL62 973 aaPredicted RBP28.91■■■□□ 2.22
SNX11-209ENST00000581705 RGS12O14924 1447 aa28.91■■■□□ 2.22
SNX11-209ENST00000581705 EIF3AQ14152 1382 aaKnown RBP28.9■■■□□ 2.22
SNX11-209ENST00000581705 TNS3Q68CZ2 1445 aa28.89■■■□□ 2.22
SNX11-209ENST00000581705 UPF1Q92900 1129 aaKnown RBP eCLIP28.89■■■□□ 2.22
SNX11-209ENST00000581705 SBNO1A3KN83 1393 aa28.89■■■□□ 2.22
SNX11-209ENST00000581705 WASLO00401 505 aaPredicted RBP28.88■■■□□ 2.21
SNX11-209ENST00000581705 MARF1Q9Y4F3 1742 aaKnown RBP28.88■■■□□ 2.21
SNX11-209ENST00000581705 EIF4G2P78344 907 aaKnown RBP eCLIP28.87■■■□□ 2.21
SNX11-209ENST00000581705 PMFBP1Q8TBY8 1022 aa28.87■■■□□ 2.21
SNX11-209ENST00000581705 BCL9LQ86UU0 1499 aa28.87■■■□□ 2.21
SNX11-209ENST00000581705 PRR36Q9H6K5 1346 aa28.87■■■□□ 2.21
SNX11-209ENST00000581705 ATRNO75882 1429 aa28.87■■■□□ 2.21
SNX11-209ENST00000581705 ARHGEF28Q8N1W1 1705 aaKnown RBP28.86■■■□□ 2.21
SNX11-209ENST00000581705 TULP4Q9NRJ4 1543 aa28.86■■■□□ 2.21
SNX11-209ENST00000581705 ROCK2O75116 1388 aaKnown RBP28.86■■■□□ 2.21
SNX11-209ENST00000581705 ARHGEF10O15013 1369 aa28.82■■■□□ 2.2
SNX11-209ENST00000581705 CARD11Q9BXL7 1154 aa28.81■■■□□ 2.2
SNX11-209ENST00000581705 SLIT2O94813 1529 aa28.79■■■□□ 2.2
SNX11-209ENST00000581705 CABLES1Q8TDN4 633 aa28.79■■■□□ 2.2
SNX11-209ENST00000581705 NBPF1Q3BBV0 1214 aa28.78■■■□□ 2.2
SNX11-209ENST00000581705 LMOD2Q6P5Q4 547 aa28.78■■■□□ 2.2
SNX11-209ENST00000581705 USP47Q96K76 1375 aa28.78■■■□□ 2.2
SNX11-209ENST00000581705 HAP1P54257 671 aaPredicted RBP28.77■■■□□ 2.2
SNX11-209ENST00000581705 HSPA5P11021 654 aaKnown RBP28.76■■■□□ 2.19
SNX11-209ENST00000581705 UNC5CLQ8IV45 518 aa28.76■■■□□ 2.19
SNX11-209ENST00000581705 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.75■■■□□ 2.19
SNX11-209ENST00000581705 TRPM3Q9HCF6 1732 aaPredicted RBP28.75■■■□□ 2.19
SNX11-209ENST00000581705 ATP7BP35670 1465 aa28.75■■■□□ 2.19
SNX11-209ENST00000581705 NUDT16Q96DE0 195 aaKnown RBP28.75■■■□□ 2.19
SNX11-209ENST00000581705 GJD4Q96KN9 370 aaPredicted RBP28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms