RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 C1orf167Q5SNV9 1468 aa18.23■□□□□ 0.51
SNORD55-201ENST00000581525 CDC42BPGQ6DT37 1551 aa18.22■□□□□ 0.51
SNORD55-201ENST00000581525 NBPF1Q3BBV0 1214 aa18.22■□□□□ 0.51
SNORD55-201ENST00000581525 PRAM1Q96QH2 718 aa18.22■□□□□ 0.51
SNORD55-201ENST00000581525 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
SNORD55-201ENST00000581525 AHDC1Q5TGY3 1603 aaPredicted RBP18.2■□□□□ 0.5
SNORD55-201ENST00000581525 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
SNORD55-201ENST00000581525 POGKQ9P215 609 aa18.17■□□□□ 0.5
SNORD55-201ENST00000581525 ORAI2Q96SN7 254 aa18.16■□□□□ 0.5
SNORD55-201ENST00000581525 TIMELESSQ9UNS1 1208 aa18.16■□□□□ 0.5
SNORD55-201ENST00000581525 ADGRB2O60241 1585 aa18.15■□□□□ 0.5
SNORD55-201ENST00000581525 COL16A1Q07092 1604 aaPredicted RBP18.15■□□□□ 0.5
SNORD55-201ENST00000581525 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
SNORD55-201ENST00000581525 SOS2Q07890 1332 aaPredicted RBP18.14■□□□□ 0.49
SNORD55-201ENST00000581525 NHSL1Q5SYE7 1610 aa18.13■□□□□ 0.49
SNORD55-201ENST00000581525 TONSLQ96HA7 1378 aa18.13■□□□□ 0.49
SNORD55-201ENST00000581525 JCADQ9P266 1359 aa18.13■□□□□ 0.49
SNORD55-201ENST00000581525 TRPM1Q7Z4N2 1603 aa18.12■□□□□ 0.49
SNORD55-201ENST00000581525 PHLPP1O60346 1717 aa18.12■□□□□ 0.49
SNORD55-201ENST00000581525 FMN2Q9NZ56 1722 aa18.12■□□□□ 0.49
SNORD55-201ENST00000581525 WASLO00401 505 aaPredicted RBP18.11■□□□□ 0.49
SNORD55-201ENST00000581525 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
SNORD55-201ENST00000581525 LRRC59Q96AG4 307 aaKnown RBP18.11■□□□□ 0.49
SNORD55-201ENST00000581525 ANKARQ7Z5J8 1434 aa18.11■□□□□ 0.49
SNORD55-201ENST00000581525 ARHGEF28Q8N1W1 1705 aaKnown RBP18.11■□□□□ 0.49
SNORD55-201ENST00000581525 ESCO1Q5FWF5 840 aa18.1■□□□□ 0.49
SNORD55-201ENST00000581525 NPHP3Q7Z494 1330 aa18.08■□□□□ 0.49
SNORD55-201ENST00000581525 DDX17Q92841 729 aaKnown RBP18.08■□□□□ 0.48
SNORD55-201ENST00000581525 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
SNORD55-201ENST00000581525 SPATA31A6Q5VVP1 1343 aa18.07■□□□□ 0.48
SNORD55-201ENST00000581525 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
SNORD55-201ENST00000581525 ROCK2O75116 1388 aaKnown RBP18.06■□□□□ 0.48
SNORD55-201ENST00000581525 CENPJQ9HC77 1338 aaPredicted RBP18.06■□□□□ 0.48
SNORD55-201ENST00000581525 HIRIP3Q9BW71 556 aaPredicted RBP18.06■□□□□ 0.48
SNORD55-201ENST00000581525 MED1Q15648 1581 aaPredicted RBP18.05■□□□□ 0.48
SNORD55-201ENST00000581525 PRR36Q9H6K5 1346 aa18.05■□□□□ 0.48
SNORD55-201ENST00000581525 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
SNORD55-201ENST00000581525 PHF8Q9UPP1 1060 aa18.05■□□□□ 0.48
SNORD55-201ENST00000581525 RALGAPBQ86X10 1494 aa18.05■□□□□ 0.48
SNORD55-201ENST00000581525 TULP4Q9NRJ4 1543 aa18.04■□□□□ 0.48
SNORD55-201ENST00000581525 PXDNQ92626 1479 aa18.04■□□□□ 0.48
SNORD55-201ENST00000581525 FOXO3O43524 673 aa18.04■□□□□ 0.48
SNORD55-201ENST00000581525 USP32Q8NFA0 1604 aa18.04■□□□□ 0.48
SNORD55-201ENST00000581525 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
SNORD55-201ENST00000581525 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
SNORD55-201ENST00000581525 PNPLA6Q8IY17 1366 aa18.02■□□□□ 0.47
SNORD55-201ENST00000581525 DISP3Q9P2K9 1392 aa18.02■□□□□ 0.47
SNORD55-201ENST00000581525 NUDT16Q96DE0 195 aaKnown RBP18.01■□□□□ 0.47
SNORD55-201ENST00000581525 KIF1AQ12756 1690 aa18.01■□□□□ 0.47
SNORD55-201ENST00000581525 SBNO2Q9Y2G9 1366 aa18.01■□□□□ 0.47
SNORD55-201ENST00000581525 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
SNORD55-201ENST00000581525 PLEKHG3A1L390 1219 aa17.99■□□□□ 0.47
SNORD55-201ENST00000581525 KRT28Q7Z3Y7 464 aa17.99■□□□□ 0.47
SNORD55-201ENST00000581525 CCDC61Q9Y6R9 512 aa17.99■□□□□ 0.47
SNORD55-201ENST00000581525 ATP7BP35670 1465 aa17.99■□□□□ 0.47
SNORD55-201ENST00000581525 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
SNORD55-201ENST00000581525 CCER1Q8TC90 406 aaPredicted RBP17.98■□□□□ 0.47
SNORD55-201ENST00000581525 RGS17Q9UGC6 210 aaPredicted RBP17.98■□□□□ 0.47
SNORD55-201ENST00000581525 SBNO1A3KN83 1393 aa17.98■□□□□ 0.47
SNORD55-201ENST00000581525 RGPD8O14715 1765 aaPredicted RBP17.98■□□□□ 0.47
SNORD55-201ENST00000581525 PSME1Q06323 249 aa17.97■□□□□ 0.47
SNORD55-201ENST00000581525 POLR3AO14802 1390 aaPredicted RBP17.96■□□□□ 0.47
SNORD55-201ENST00000581525 LRP6O75581 1613 aa17.96■□□□□ 0.47
SNORD55-201ENST00000581525 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
SNORD55-201ENST00000581525 COL22A1Q8NFW1 1626 aaPredicted RBP17.94■□□□□ 0.46
SNORD55-201ENST00000581525 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
SNORD55-201ENST00000581525 EVC2Q86UK5 1308 aa17.94■□□□□ 0.46
SNORD55-201ENST00000581525 XPCQ01831 940 aaPredicted RBP17.93■□□□□ 0.46
SNORD55-201ENST00000581525 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
SNORD55-201ENST00000581525 SLC24A1O60721 1099 aa17.92■□□□□ 0.46
SNORD55-201ENST00000581525 TESK2Q96S53 571 aa17.92■□□□□ 0.46
SNORD55-201ENST00000581525 CABP2Q9NPB3 220 aa17.92■□□□□ 0.46
SNORD55-201ENST00000581525 TNS3Q68CZ2 1445 aa17.9■□□□□ 0.46
SNORD55-201ENST00000581525 TOPAZ1Q8N9V7 1692 aa17.9■□□□□ 0.46
SNORD55-201ENST00000581525 SRPK2P78362 688 aaKnown RBP17.9■□□□□ 0.46
SNORD55-201ENST00000581525 ILDR2Q71H61 639 aa17.9■□□□□ 0.46
SNORD55-201ENST00000581525 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
SNORD55-201ENST00000581525 ACEP12821 1306 aa17.9■□□□□ 0.46
SNORD55-201ENST00000581525 BRD4O60885 1362 aaPredicted RBP17.89■□□□□ 0.45
SNORD55-201ENST00000581525 ITSN1Q15811 1721 aa17.89■□□□□ 0.45
SNORD55-201ENST00000581525 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
SNORD55-201ENST00000581525 TRPM3Q9HCF6 1732 aaPredicted RBP17.88■□□□□ 0.45
SNORD55-201ENST00000581525 ARHGEF10O15013 1369 aa17.88■□□□□ 0.45
SNORD55-201ENST00000581525 ST20-MTHFSA0A0A6YYL1 179 aa17.87■□□□□ 0.45
SNORD55-201ENST00000581525 NUTM2BA6NNL0 878 aaPredicted RBP17.87■□□□□ 0.45
SNORD55-201ENST00000581525 NUTM2EB1AL46 878 aaPredicted RBP17.87■□□□□ 0.45
SNORD55-201ENST00000581525 NUTM2AQ8IVF1 878 aaPredicted RBP17.87■□□□□ 0.45
SNORD55-201ENST00000581525 CABP1Q9NZU7 370 aa17.87■□□□□ 0.45
SNORD55-201ENST00000581525 FNBP4Q8N3X1 1017 aaPredicted RBP17.86■□□□□ 0.45
SNORD55-201ENST00000581525 ATAD2Q6PL18 1390 aa17.86■□□□□ 0.45
SNORD55-201ENST00000581525 PPIP5K1Q6PFW1 1433 aa17.86■□□□□ 0.45
SNORD55-201ENST00000581525 POTEAQ6S8J7 498 aa17.85■□□□□ 0.45
SNORD55-201ENST00000581525 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
SNORD55-201ENST00000581525 ALS2Q96Q42 1657 aa17.84■□□□□ 0.45
SNORD55-201ENST00000581525 SSH2Q76I76 1423 aa17.84■□□□□ 0.45
SNORD55-201ENST00000581525 ZNF772Q68DY9 489 aaPredicted RBP17.84■□□□□ 0.45
SNORD55-201ENST00000581525 MEX3CQ5U5Q3 659 aaKnown RBP17.83■□□□□ 0.44
SNORD55-201ENST00000581525 CPSF1Q10570 1443 aaKnown RBP17.82■□□□□ 0.44
SNORD55-201ENST00000581525 USP47Q96K76 1375 aa17.82■□□□□ 0.44
SNORD55-201ENST00000581525 AFF2P51816 1311 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms