RNA–Protein interactions for RNA: ENST00000581460.1

RAB11FIP4-207, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-207ENST00000581460 TECPR2O15040 1411 aa28.6■■■□□ 2.17
RAB11FIP4-207ENST00000581460 PNPLA6Q8IY17 1366 aa28.58■■■□□ 2.17
RAB11FIP4-207ENST00000581460 ESCO1Q5FWF5 840 aa28.57■■■□□ 2.16
RAB11FIP4-207ENST00000581460 YTHDC2Q9H6S0 1430 aaKnown RBP28.57■■■□□ 2.16
RAB11FIP4-207ENST00000581460 CDC42BPGQ6DT37 1551 aa28.57■■■□□ 2.16
RAB11FIP4-207ENST00000581460 C14orf93Q9H972 538 aaKnown RBP28.56■■■□□ 2.16
RAB11FIP4-207ENST00000581460 MYOM2P54296 1465 aa28.54■■■□□ 2.16
RAB11FIP4-207ENST00000581460 SOS2Q07890 1332 aaPredicted RBP28.54■■■□□ 2.16
RAB11FIP4-207ENST00000581460 PLEKHH1Q9ULM0 1364 aa28.53■■■□□ 2.16
RAB11FIP4-207ENST00000581460 NUTM2FA1L443 756 aa28.53■■■□□ 2.16
RAB11FIP4-207ENST00000581460 CFAP70Q5T0N1 1121 aa28.53■■■□□ 2.16
RAB11FIP4-207ENST00000581460 DHX57Q6P158 1386 aaKnown RBP28.52■■■□□ 2.16
RAB11FIP4-207ENST00000581460 AFF2P51816 1311 aa28.52■■■□□ 2.16
RAB11FIP4-207ENST00000581460 NPHP3Q7Z494 1330 aa28.51■■■□□ 2.15
RAB11FIP4-207ENST00000581460 C8orf37Q96NL8 207 aa28.51■■■□□ 2.15
RAB11FIP4-207ENST00000581460 KNDC1Q76NI1 1749 aa28.51■■■□□ 2.15
RAB11FIP4-207ENST00000581460 NRXN1Q9ULB1 1477 aa28.51■■■□□ 2.15
RAB11FIP4-207ENST00000581460 HRCP23327 699 aa28.5■■■□□ 2.15
RAB11FIP4-207ENST00000581460 LAMC1P11047 1609 aa28.5■■■□□ 2.15
RAB11FIP4-207ENST00000581460 ADAMTS2O95450 1211 aa28.48■■■□□ 2.15
RAB11FIP4-207ENST00000581460 RXRBP28702 533 aa28.48■■■□□ 2.15
RAB11FIP4-207ENST00000581460 SIRT1Q96EB6 747 aa28.48■■■□□ 2.15
RAB11FIP4-207ENST00000581460 FOXO3O43524 673 aa28.46■■■□□ 2.15
RAB11FIP4-207ENST00000581460 KDM2AQ9Y2K7 1162 aa28.45■■■□□ 2.14
RAB11FIP4-207ENST00000581460 XPCQ01831 940 aaPredicted RBP28.44■■■□□ 2.14
RAB11FIP4-207ENST00000581460 NGLY1Q96IV0 654 aa28.44■■■□□ 2.14
RAB11FIP4-207ENST00000581460 SAFB2Q14151 953 aaKnown RBP eCLIP28.43■■■□□ 2.14
RAB11FIP4-207ENST00000581460 DCAF11Q8TEB1 546 aa28.43■■■□□ 2.14
RAB11FIP4-207ENST00000581460 PRAM1Q96QH2 718 aa28.42■■■□□ 2.14
RAB11FIP4-207ENST00000581460 POGKQ9P215 609 aa28.42■■■□□ 2.14
RAB11FIP4-207ENST00000581460 QTRT2Q9H974 415 aaKnown RBP28.38■■■□□ 2.13
RAB11FIP4-207ENST00000581460 PXDNQ92626 1479 aa28.38■■■□□ 2.13
RAB11FIP4-207ENST00000581460 FMN2Q9NZ56 1722 aa28.38■■■□□ 2.13
RAB11FIP4-207ENST00000581460 STAC3Q96MF2 364 aa28.37■■■□□ 2.13
RAB11FIP4-207ENST00000581460 TRAK1Q9UPV9 953 aa28.35■■■□□ 2.13
RAB11FIP4-207ENST00000581460 DLC1Q96QB1 1528 aa28.34■■■□□ 2.13
RAB11FIP4-207ENST00000581460 RBM6P78332 1123 aaKnown RBP28.33■■■□□ 2.13
RAB11FIP4-207ENST00000581460 USP21Q9UK80 565 aa28.33■■■□□ 2.13
RAB11FIP4-207ENST00000581460 CDK12Q9NYV4 1490 aaPredicted RBP28.33■■■□□ 2.13
RAB11FIP4-207ENST00000581460 KIF1AQ12756 1690 aa28.32■■■□□ 2.12
RAB11FIP4-207ENST00000581460 PHF8Q9UPP1 1060 aa28.32■■■□□ 2.12
RAB11FIP4-207ENST00000581460 COL22A1Q8NFW1 1626 aaPredicted RBP28.32■■■□□ 2.12
RAB11FIP4-207ENST00000581460 KRT28Q7Z3Y7 464 aa28.31■■■□□ 2.12
RAB11FIP4-207ENST00000581460 ADGRB1O14514 1584 aa28.31■■■□□ 2.12
RAB11FIP4-207ENST00000581460 SPATA31A3Q5VYP0 1347 aa28.28■■■□□ 2.12
RAB11FIP4-207ENST00000581460 PSME1Q06323 249 aa28.28■■■□□ 2.12
RAB11FIP4-207ENST00000581460 FNBP4Q8N3X1 1017 aaPredicted RBP28.27■■■□□ 2.12
RAB11FIP4-207ENST00000581460 HIRIP3Q9BW71 556 aaPredicted RBP28.27■■■□□ 2.12
RAB11FIP4-207ENST00000581460 TRPC5Q9UL62 973 aaPredicted RBP28.27■■■□□ 2.12
RAB11FIP4-207ENST00000581460 MINK1Q8N4C8 1332 aaPredicted RBP28.26■■■□□ 2.11
RAB11FIP4-207ENST00000581460 UPF1Q92900 1129 aaKnown RBP eCLIP28.24■■■□□ 2.11
RAB11FIP4-207ENST00000581460 RGS12O14924 1447 aa28.24■■■□□ 2.11
RAB11FIP4-207ENST00000581460 ANKARQ7Z5J8 1434 aa28.24■■■□□ 2.11
RAB11FIP4-207ENST00000581460 HAP1P54257 671 aaPredicted RBP28.23■■■□□ 2.11
RAB11FIP4-207ENST00000581460 EIF3AQ14152 1382 aaKnown RBP28.23■■■□□ 2.11
RAB11FIP4-207ENST00000581460 LMOD2Q6P5Q4 547 aa28.22■■■□□ 2.11
RAB11FIP4-207ENST00000581460 PMFBP1Q8TBY8 1022 aa28.22■■■□□ 2.11
RAB11FIP4-207ENST00000581460 ADGRB2O60241 1585 aa28.21■■■□□ 2.11
RAB11FIP4-207ENST00000581460 TNS3Q68CZ2 1445 aa28.21■■■□□ 2.11
RAB11FIP4-207ENST00000581460 RGPD8O14715 1765 aaPredicted RBP28.21■■■□□ 2.11
RAB11FIP4-207ENST00000581460 PLEKHG5O94827 1062 aa28.19■■■□□ 2.1
RAB11FIP4-207ENST00000581460 SBNO1A3KN83 1393 aa28.18■■■□□ 2.1
RAB11FIP4-207ENST00000581460 ATRNO75882 1429 aa28.18■■■□□ 2.1
RAB11FIP4-207ENST00000581460 WASLO00401 505 aaPredicted RBP28.17■■■□□ 2.1
RAB11FIP4-207ENST00000581460 ARHGEF10O15013 1369 aa28.15■■■□□ 2.1
RAB11FIP4-207ENST00000581460 GPRASP1Q5JY77 1395 aa28.14■■■□□ 2.1
RAB11FIP4-207ENST00000581460 TULP4Q9NRJ4 1543 aa28.13■■■□□ 2.09
RAB11FIP4-207ENST00000581460 CABLES1Q8TDN4 633 aa28.13■■■□□ 2.09
RAB11FIP4-207ENST00000581460 USP32Q8NFA0 1604 aa28.13■■■□□ 2.09
RAB11FIP4-207ENST00000581460 BCL9LQ86UU0 1499 aa28.13■■■□□ 2.09
RAB11FIP4-207ENST00000581460 MARF1Q9Y4F3 1742 aaKnown RBP28.12■■■□□ 2.09
RAB11FIP4-207ENST00000581460 PRR36Q9H6K5 1346 aa28.12■■■□□ 2.09
RAB11FIP4-207ENST00000581460 UNC5CLQ8IV45 518 aa28.1■■■□□ 2.09
RAB11FIP4-207ENST00000581460 NGDNQ8NEJ9 315 aaKnown RBP28.1■■■□□ 2.09
RAB11FIP4-207ENST00000581460 GJD4Q96KN9 370 aaPredicted RBP28.08■■■□□ 2.09
RAB11FIP4-207ENST00000581460 ARHGEF28Q8N1W1 1705 aaKnown RBP28.08■■■□□ 2.09
RAB11FIP4-207ENST00000581460 ATAD2Q6PL18 1390 aa28.08■■■□□ 2.09
RAB11FIP4-207ENST00000581460 SLIT2O94813 1529 aa28.06■■■□□ 2.08
RAB11FIP4-207ENST00000581460 NUDT16Q96DE0 195 aaKnown RBP28.05■■■□□ 2.08
RAB11FIP4-207ENST00000581460 PAK3O75914 559 aaPredicted RBP28.04■■■□□ 2.08
RAB11FIP4-207ENST00000581460 NBPF1Q3BBV0 1214 aa28.04■■■□□ 2.08
RAB11FIP4-207ENST00000581460 KIAA1210Q9ULL0 1709 aa28.04■■■□□ 2.08
RAB11FIP4-207ENST00000581460 CDK19Q9BWU1 502 aa28.03■■■□□ 2.08
RAB11FIP4-207ENST00000581460 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.01■■■□□ 2.07
RAB11FIP4-207ENST00000581460 CCDC9Q9Y3X0 531 aaKnown RBP28■■■□□ 2.07
RAB11FIP4-207ENST00000581460 ATP7BP35670 1465 aa28■■■□□ 2.07
RAB11FIP4-207ENST00000581460 RALGAPBQ86X10 1494 aa27.99■■■□□ 2.07
RAB11FIP4-207ENST00000581460 L3MBTL2Q969R5 705 aa27.98■■■□□ 2.07
RAB11FIP4-207ENST00000581460 TRPM3Q9HCF6 1732 aaPredicted RBP27.98■■■□□ 2.07
RAB11FIP4-207ENST00000581460 ITSN1Q15811 1721 aa27.96■■■□□ 2.07
RAB11FIP4-207ENST00000581460 ABCA3Q99758 1704 aa27.96■■■□□ 2.07
RAB11FIP4-207ENST00000581460 NEUROD1Q13562 356 aa27.96■■■□□ 2.07
RAB11FIP4-207ENST00000581460 VPS72Q15906 364 aa27.96■■■□□ 2.07
RAB11FIP4-207ENST00000581460 SIN3AQ96ST3 1273 aa27.96■■■□□ 2.07
RAB11FIP4-207ENST00000581460 CENPJQ9HC77 1338 aaPredicted RBP27.95■■■□□ 2.07
RAB11FIP4-207ENST00000581460 FAM83GA6ND36 823 aa27.95■■■□□ 2.06
RAB11FIP4-207ENST00000581460 CCDC61Q9Y6R9 512 aa27.95■■■□□ 2.06
RAB11FIP4-207ENST00000581460 SRPK2P78362 688 aaKnown RBP27.93■■■□□ 2.06
RAB11FIP4-207ENST00000581460 GLI3P10071 1580 aa27.93■■■□□ 2.06
RAB11FIP4-207ENST00000581460 ALS2Q96Q42 1657 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms