RNA–Protein interactions for RNA: ENST00000581442.5

GAPLINC-204, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 450 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-204ENST00000581442 PDE4DQ08499 809 aa7.34□□□□□ -1.23
GAPLINC-204ENST00000581442 LIAT1Q6ZQX7 453 aa7.34□□□□□ -1.23
GAPLINC-204ENST00000581442 ZNF598Q86UK7 904 aaKnown RBP7.34□□□□□ -1.23
GAPLINC-204ENST00000581442 SPIRE2Q8WWL2 714 aa7.34□□□□□ -1.23
GAPLINC-204ENST00000581442 BEGAINQ9BUH8 593 aa7.33□□□□□ -1.24
GAPLINC-204ENST00000581442 ZNF697Q5TEC3 545 aa7.32□□□□□ -1.24
GAPLINC-204ENST00000581442 SYMPKQ92797 1274 aaKnown RBP7.32□□□□□ -1.24
GAPLINC-204ENST00000581442 PCDHGC3Q9UN70 934 aa7.32□□□□□ -1.24
GAPLINC-204ENST00000581442 MOXD2PA6NHM9 499 aa7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 NDUFV2P19404 249 aa7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 RPIAP49247 311 aa7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 PRR20EP86478 221 aa7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 PRR20CP86479 221 aa7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 PRR20DP86480 221 aa7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 PRR20BP86481 221 aa7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 PRR20AP86496 221 aa7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 USB1Q9BQ65 265 aaKnown RBP7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 FCF1Q9Y324 198 aaKnown RBP7.31□□□□□ -1.24
GAPLINC-204ENST00000581442 FDX1P10109 184 aa7.3□□□□□ -1.24
GAPLINC-204ENST00000581442 TRAF7Q6Q0C0 670 aa7.3□□□□□ -1.24
GAPLINC-204ENST00000581442 MMP16P51512 607 aa7.29□□□□□ -1.24
GAPLINC-204ENST00000581442 TRIM67Q6ZTA4 783 aa7.29□□□□□ -1.24
GAPLINC-204ENST00000581442 TBC1D2Q9BYX2 928 aa7.29□□□□□ -1.24
GAPLINC-204ENST00000581442 DXOO77932 396 aaKnown RBP7.27□□□□□ -1.25
GAPLINC-204ENST00000581442 CD2BP2O95400 341 aaKnown RBP7.27□□□□□ -1.25
GAPLINC-204ENST00000581442 ZBTB24O43167 697 aaPredicted RBP7.26□□□□□ -1.25
GAPLINC-204ENST00000581442 RETREG3Q86VR2 466 aa7.26□□□□□ -1.25
GAPLINC-204ENST00000581442 C6orf229H3BNL8 230 aa7.25□□□□□ -1.25
GAPLINC-204ENST00000581442 GDF9O60383 454 aa7.25□□□□□ -1.25
GAPLINC-204ENST00000581442 DGAT1O75907 488 aa7.25□□□□□ -1.25
GAPLINC-204ENST00000581442 PKDCCQ504Y2 493 aa7.25□□□□□ -1.25
GAPLINC-204ENST00000581442 RSBN1LQ6PCB5 846 aaPredicted RBP7.25□□□□□ -1.25
GAPLINC-204ENST00000581442 TNFRSF10AO00220 468 aa7.24□□□□□ -1.25
GAPLINC-204ENST00000581442 LCE2BO14633 110 aa7.24□□□□□ -1.25
GAPLINC-204ENST00000581442 JUNDP17535 347 aa7.24□□□□□ -1.25
GAPLINC-204ENST00000581442 DIXDC1Q155Q3 683 aa7.24□□□□□ -1.25
GAPLINC-204ENST00000581442 GPBP1L1Q9HC44 474 aaPredicted RBP7.24□□□□□ -1.25
GAPLINC-204ENST00000581442 PCDHB15Q9Y5E8 787 aa7.24□□□□□ -1.25
GAPLINC-204ENST00000581442 SPTLC1O15269 473 aa7.23□□□□□ -1.25
GAPLINC-204ENST00000581442 GJA5P36382 358 aa7.22□□□□□ -1.25
GAPLINC-204ENST00000581442 MYSM1Q5VVJ2 828 aa7.22□□□□□ -1.25
GAPLINC-204ENST00000581442 RIC3Q7Z5B4 369 aa7.22□□□□□ -1.25
GAPLINC-204ENST00000581442 PKD2L1Q9P0L9 805 aa7.22□□□□□ -1.25
GAPLINC-204ENST00000581442 FAM187AA6NFU0 413 aa7.21□□□□□ -1.26
GAPLINC-204ENST00000581442 TRIM32Q13049 653 aa7.21□□□□□ -1.26
GAPLINC-204ENST00000581442 MTMR2Q13614 643 aa7.21□□□□□ -1.26
GAPLINC-204ENST00000581442 CCDC24Q8N4L8 307 aa7.21□□□□□ -1.26
GAPLINC-204ENST00000581442 PRR7Q8TB68 274 aa7.21□□□□□ -1.26
GAPLINC-204ENST00000581442 LIMD1Q9UGP4 676 aa7.21□□□□□ -1.26
GAPLINC-204ENST00000581442 HRCP23327 699 aa7.2□□□□□ -1.26
GAPLINC-204ENST00000581442 FOXC1Q12948 553 aa7.2□□□□□ -1.26
GAPLINC-204ENST00000581442 KDM4CQ9H3R0 1056 aa7.2□□□□□ -1.26
GAPLINC-204ENST00000581442 SPDYE5A6NIY4 337 aa7.19□□□□□ -1.26
GAPLINC-204ENST00000581442 CSPP1Q1MSJ5 1256 aa7.19□□□□□ -1.26
GAPLINC-204ENST00000581442 PTCRAQ6ISU1 281 aaPredicted RBP7.19□□□□□ -1.26
GAPLINC-204ENST00000581442 CYP4X1Q8N118 509 aa7.19□□□□□ -1.26
GAPLINC-204ENST00000581442 CABLES1Q8TDN4 633 aa7.19□□□□□ -1.26
GAPLINC-204ENST00000581442 NUDT12Q9BQG2 462 aa7.19□□□□□ -1.26
GAPLINC-204ENST00000581442 CFAP99D6REC4 459 aa7.18□□□□□ -1.26
GAPLINC-204ENST00000581442 WNT7AO00755 349 aa7.18□□□□□ -1.26
GAPLINC-204ENST00000581442 QPCTQ16769 361 aa7.18□□□□□ -1.26
GAPLINC-204ENST00000581442 FAM117AQ9C073 453 aa7.18□□□□□ -1.26
GAPLINC-204ENST00000581442 MYT1Q01538 1121 aa7.17□□□□□ -1.26
GAPLINC-204ENST00000581442 ZBTB3Q9H5J0 574 aa7.17□□□□□ -1.26
GAPLINC-204ENST00000581442 TOR4AQ9NXH8 423 aa7.17□□□□□ -1.26
GAPLINC-204ENST00000581442 CCNYL3P0C7X3 344 aa7.16□□□□□ -1.26
GAPLINC-204ENST00000581442 WNT7BP56706 349 aa7.16□□□□□ -1.26
GAPLINC-204ENST00000581442 SKOR1P84550 965 aa7.16□□□□□ -1.26
GAPLINC-204ENST00000581442 PTPRNQ16849 979 aa7.16□□□□□ -1.26
GAPLINC-204ENST00000581442 TUSC1Q2TAM9 212 aa7.16□□□□□ -1.26
GAPLINC-204ENST00000581442 PRPF38BQ5VTL8 546 aaKnown RBP7.16□□□□□ -1.26
GAPLINC-204ENST00000581442 DESI1Q6ICB0 168 aa7.16□□□□□ -1.26
GAPLINC-204ENST00000581442 POLR3EQ9NVU0 708 aa7.16□□□□□ -1.26
GAPLINC-204ENST00000581442 PLEKHG3A1L390 1219 aa7.15□□□□□ -1.26
GAPLINC-204ENST00000581442 LILRB3O75022 631 aa7.15□□□□□ -1.26
GAPLINC-204ENST00000581442 CLK2P49760 499 aaKnown RBP7.15□□□□□ -1.26
GAPLINC-204ENST00000581442 TTC24A2A3L6 582 aaPredicted RBP7.14□□□□□ -1.27
GAPLINC-204ENST00000581442 TPRNQ4KMQ1 711 aa7.14□□□□□ -1.27
GAPLINC-204ENST00000581442 RTL5Q5HYW3 569 aaPredicted RBP7.14□□□□□ -1.27
GAPLINC-204ENST00000581442 ZNF787Q6DD87 383 aa7.14□□□□□ -1.27
GAPLINC-204ENST00000581442 LYPD8Q6UX82 237 aa7.14□□□□□ -1.27
GAPLINC-204ENST00000581442 CRIPAKQ8N1N5 446 aa7.14□□□□□ -1.27
GAPLINC-204ENST00000581442 RSPH6AQ9H0K4 717 aa7.14□□□□□ -1.27
GAPLINC-204ENST00000581442 EVA1BQ9NVM1 165 aa7.14□□□□□ -1.27
GAPLINC-204ENST00000581442 NUTM2BA6NNL0 878 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-204ENST00000581442 NUTM2EB1AL46 878 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-204ENST00000581442 AVPP01185 164 aa7.13□□□□□ -1.27
GAPLINC-204ENST00000581442 CTC1Q2NKJ3 1217 aa7.13□□□□□ -1.27
GAPLINC-204ENST00000581442 NUTM2DQ5VT03 806 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-204ENST00000581442 FBXO31Q5XUX0 539 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-204ENST00000581442 NUTM2AQ8IVF1 878 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-204ENST00000581442 SNIP1Q8TAD8 396 aaKnown RBP7.13□□□□□ -1.27
GAPLINC-204ENST00000581442 DDRGK1Q96HY6 314 aa7.13□□□□□ -1.27
GAPLINC-204ENST00000581442 PER1O15534 1290 aaPredicted RBP7.12□□□□□ -1.27
GAPLINC-204ENST00000581442 KCNH2Q12809 1159 aa7.12□□□□□ -1.27
GAPLINC-204ENST00000581442 SH3D19Q5HYK7 790 aa7.12□□□□□ -1.27
GAPLINC-204ENST00000581442 MRGPRX2Q96LB1 330 aa7.12□□□□□ -1.27
GAPLINC-204ENST00000581442 UNC93B1Q9H1C4 597 aa7.12□□□□□ -1.27
GAPLINC-204ENST00000581442 SKIV2LQ15477 1246 aaKnown RBP7.11□□□□□ -1.27
GAPLINC-204ENST00000581442 RC3H1Q5TC82 1133 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms