RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 C1orf167Q5SNV9 1468 aa10.55□□□□□ -0.72
SNX11-208ENST00000581298 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
SNX11-208ENST00000581298 DHX57Q6P158 1386 aaKnown RBP10.54□□□□□ -0.72
SNX11-208ENST00000581298 YTHDC2Q9H6S0 1430 aaKnown RBP10.54□□□□□ -0.72
SNX11-208ENST00000581298 LAMC1P11047 1609 aa10.54□□□□□ -0.72
SNX11-208ENST00000581298 SPATA31A6Q5VVP1 1343 aa10.54□□□□□ -0.72
SNX11-208ENST00000581298 CFAP70Q5T0N1 1121 aa10.53□□□□□ -0.72
SNX11-208ENST00000581298 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
SNX11-208ENST00000581298 ZNF772Q68DY9 489 aaPredicted RBP10.53□□□□□ -0.72
SNX11-208ENST00000581298 CDK12Q9NYV4 1490 aaPredicted RBP10.53□□□□□ -0.72
SNX11-208ENST00000581298 TMEM132EQ6IEE7 984 aa10.52□□□□□ -0.73
SNX11-208ENST00000581298 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
SNX11-208ENST00000581298 KNDC1Q76NI1 1749 aa10.52□□□□□ -0.73
SNX11-208ENST00000581298 NALCNQ8IZF0 1738 aa10.52□□□□□ -0.73
SNX11-208ENST00000581298 DLC1Q96QB1 1528 aa10.52□□□□□ -0.73
SNX11-208ENST00000581298 SOS2Q07890 1332 aaPredicted RBP10.52□□□□□ -0.73
SNX11-208ENST00000581298 ADGRB1O14514 1584 aa10.52□□□□□ -0.73
SNX11-208ENST00000581298 CDC42BPGQ6DT37 1551 aa10.52□□□□□ -0.73
SNX11-208ENST00000581298 PHLPP1O60346 1717 aa10.51□□□□□ -0.73
SNX11-208ENST00000581298 C1QBPQ07021 282 aaKnown RBP10.51□□□□□ -0.73
SNX11-208ENST00000581298 WAPLQ7Z5K2 1190 aa10.51□□□□□ -0.73
SNX11-208ENST00000581298 LRRC59Q96AG4 307 aaKnown RBP10.51□□□□□ -0.73
SNX11-208ENST00000581298 NHSL1Q5SYE7 1610 aa10.5□□□□□ -0.73
SNX11-208ENST00000581298 PLEKHH1Q9ULM0 1364 aa10.5□□□□□ -0.73
SNX11-208ENST00000581298 RXRBP28702 533 aa10.49□□□□□ -0.73
SNX11-208ENST00000581298 DCAF11Q8TEB1 546 aa10.49□□□□□ -0.73
SNX11-208ENST00000581298 ORAI2Q96SN7 254 aa10.49□□□□□ -0.73
SNX11-208ENST00000581298 EP400Q96L91 3159 aa10.49□□□□□ -0.73
SNX11-208ENST00000581298 SHPRHQ149N8 1683 aa10.48□□□□□ -0.73
SNX11-208ENST00000581298 STK26Q9P289 416 aa10.48□□□□□ -0.73
SNX11-208ENST00000581298 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
SNX11-208ENST00000581298 PNPLA6Q8IY17 1366 aa10.47□□□□□ -0.73
SNX11-208ENST00000581298 LRP6O75581 1613 aa10.47□□□□□ -0.73
SNX11-208ENST00000581298 NPHP3Q7Z494 1330 aa10.45□□□□□ -0.74
SNX11-208ENST00000581298 PRAM1Q96QH2 718 aa10.45□□□□□ -0.74
SNX11-208ENST00000581298 ADGRB2O60241 1585 aa10.44□□□□□ -0.74
SNX11-208ENST00000581298 ANKARQ7Z5J8 1434 aa10.44□□□□□ -0.74
SNX11-208ENST00000581298 DDX17Q92841 729 aaKnown RBP10.44□□□□□ -0.74
SNX11-208ENST00000581298 RNF216Q9NWF9 866 aaPredicted RBP10.44□□□□□ -0.74
SNX11-208ENST00000581298 KDM2AQ9Y2K7 1162 aa10.44□□□□□ -0.74
SNX11-208ENST00000581298 PXDNQ92626 1479 aa10.43□□□□□ -0.74
SNX11-208ENST00000581298 ESCO1Q5FWF5 840 aa10.43□□□□□ -0.74
SNX11-208ENST00000581298 FMN2Q9NZ56 1722 aa10.43□□□□□ -0.74
SNX11-208ENST00000581298 KIAA1210Q9ULL0 1709 aa10.42□□□□□ -0.74
SNX11-208ENST00000581298 FOXO3O43524 673 aa10.41□□□□□ -0.74
SNX11-208ENST00000581298 MEX3CQ5U5Q3 659 aaKnown RBP10.41□□□□□ -0.74
SNX11-208ENST00000581298 TRAK1Q9UPV9 953 aa10.41□□□□□ -0.74
SNX11-208ENST00000581298 SBNO1A3KN83 1393 aa10.4□□□□□ -0.74
SNX11-208ENST00000581298 LRP5O75197 1615 aa10.4□□□□□ -0.74
SNX11-208ENST00000581298 EIF3AQ14152 1382 aaKnown RBP10.4□□□□□ -0.74
SNX11-208ENST00000581298 COL22A1Q8NFW1 1626 aaPredicted RBP10.4□□□□□ -0.74
SNX11-208ENST00000581298 SPATA31A3Q5VYP0 1347 aa10.4□□□□□ -0.74
SNX11-208ENST00000581298 WASLO00401 505 aaPredicted RBP10.4□□□□□ -0.74
SNX11-208ENST00000581298 FNBP4Q8N3X1 1017 aaPredicted RBP10.4□□□□□ -0.74
SNX11-208ENST00000581298 L3MBTL2Q969R5 705 aa10.4□□□□□ -0.74
SNX11-208ENST00000581298 POGKQ9P215 609 aa10.4□□□□□ -0.74
SNX11-208ENST00000581298 PHF8Q9UPP1 1060 aa10.4□□□□□ -0.74
SNX11-208ENST00000581298 PRR36Q9H6K5 1346 aa10.39□□□□□ -0.75
SNX11-208ENST00000581298 KIF1AQ12756 1690 aa10.39□□□□□ -0.75
SNX11-208ENST00000581298 TRIM26Q12899 539 aaPredicted RBP10.39□□□□□ -0.75
SNX11-208ENST00000581298 NBPF1Q3BBV0 1214 aa10.39□□□□□ -0.75
SNX11-208ENST00000581298 KRT28Q7Z3Y7 464 aa10.38□□□□□ -0.75
SNX11-208ENST00000581298 SIN3AQ96ST3 1273 aa10.37□□□□□ -0.75
SNX11-208ENST00000581298 TULP4Q9NRJ4 1543 aa10.37□□□□□ -0.75
SNX11-208ENST00000581298 GPRASP1Q5JY77 1395 aa10.37□□□□□ -0.75
SNX11-208ENST00000581298 ATAD2Q6PL18 1390 aa10.37□□□□□ -0.75
SNX11-208ENST00000581298 USP32Q8NFA0 1604 aa10.36□□□□□ -0.75
SNX11-208ENST00000581298 AFF2P51816 1311 aa10.36□□□□□ -0.75
SNX11-208ENST00000581298 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
SNX11-208ENST00000581298 NUTM2BA6NNL0 878 aaPredicted RBP10.36□□□□□ -0.75
SNX11-208ENST00000581298 NUTM2EB1AL46 878 aaPredicted RBP10.36□□□□□ -0.75
SNX11-208ENST00000581298 PSME1Q06323 249 aa10.36□□□□□ -0.75
SNX11-208ENST00000581298 SAFB2Q14151 953 aaKnown RBP eCLIP10.36□□□□□ -0.75
SNX11-208ENST00000581298 NUTM2AQ8IVF1 878 aaPredicted RBP10.36□□□□□ -0.75
SNX11-208ENST00000581298 MINK1Q8N4C8 1332 aaPredicted RBP10.35□□□□□ -0.75
SNX11-208ENST00000581298 RGS12O14924 1447 aa10.35□□□□□ -0.75
SNX11-208ENST00000581298 PLEKHG3A1L390 1219 aa10.35□□□□□ -0.75
SNX11-208ENST00000581298 ARHGEF28Q8N1W1 1705 aaKnown RBP10.35□□□□□ -0.75
SNX11-208ENST00000581298 TNS3Q68CZ2 1445 aa10.34□□□□□ -0.75
SNX11-208ENST00000581298 RBM6P78332 1123 aaKnown RBP10.34□□□□□ -0.75
SNX11-208ENST00000581298 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
SNX11-208ENST00000581298 NUDT16Q96DE0 195 aaKnown RBP10.34□□□□□ -0.75
SNX11-208ENST00000581298 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
SNX11-208ENST00000581298 ARHGEF10O15013 1369 aa10.34□□□□□ -0.75
SNX11-208ENST00000581298 ATP7BP35670 1465 aa10.34□□□□□ -0.75
SNX11-208ENST00000581298 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
SNX11-208ENST00000581298 HIRIP3Q9BW71 556 aaPredicted RBP10.33□□□□□ -0.76
SNX11-208ENST00000581298 CDK19Q9BWU1 502 aa10.33□□□□□ -0.76
SNX11-208ENST00000581298 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
SNX11-208ENST00000581298 SLIT2O94813 1529 aa10.33□□□□□ -0.76
SNX11-208ENST00000581298 ATRNO75882 1429 aa10.33□□□□□ -0.76
SNX11-208ENST00000581298 CENPJQ9HC77 1338 aaPredicted RBP10.33□□□□□ -0.76
SNX11-208ENST00000581298 RGPD8O14715 1765 aaPredicted RBP10.32□□□□□ -0.76
SNX11-208ENST00000581298 BCL9LQ86UU0 1499 aa10.32□□□□□ -0.76
SNX11-208ENST00000581298 NBPF8Q3BBV2 869 aa10.32□□□□□ -0.76
SNX11-208ENST00000581298 NGLY1Q96IV0 654 aa10.32□□□□□ -0.76
SNX11-208ENST00000581298 C8orf37Q96NL8 207 aa10.32□□□□□ -0.76
SNX11-208ENST00000581298 QTRT2Q9H974 415 aaKnown RBP10.32□□□□□ -0.76
SNX11-208ENST00000581298 BRD4O60885 1362 aaPredicted RBP10.31□□□□□ -0.76
SNX11-208ENST00000581298 ADAMTS2O95450 1211 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms