RNA–Protein interactions for RNA: ENST00000580755.1

RPL23A-208, Transcript of ribosomal protein L23a, humanhuman

TSL 2

Gene RPL23A, Length 412 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-208ENST00000580755 PSDA5PKW4 1024 aaPredicted RBP24.33■■□□□ 1.49
RPL23A-208ENST00000580755 MARF1Q9Y4F3 1742 aaKnown RBP24.32■■□□□ 1.48
RPL23A-208ENST00000580755 NALCNQ8IZF0 1738 aa24.31■■□□□ 1.48
RPL23A-208ENST00000580755 GLI3P10071 1580 aa24.3■■□□□ 1.48
RPL23A-208ENST00000580755 ZNF326Q5BKZ1 582 aaKnown RBP24.29■■□□□ 1.48
RPL23A-208ENST00000580755 RALGAPBQ86X10 1494 aa24.29■■□□□ 1.48
RPL23A-208ENST00000580755 BRWD3Q6RI45 1802 aa24.28■■□□□ 1.48
RPL23A-208ENST00000580755 NRXN3Q9Y4C0 1643 aa24.28■■□□□ 1.48
RPL23A-208ENST00000580755 IFFO2Q5TF58 517 aa24.26■■□□□ 1.47
RPL23A-208ENST00000580755 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
RPL23A-208ENST00000580755 METP08581 1390 aa24.25■■□□□ 1.47
RPL23A-208ENST00000580755 BAG6P46379 1132 aa24.24■■□□□ 1.47
RPL23A-208ENST00000580755 RRBP1Q9P2E9 1410 aaKnown RBP24.21■■□□□ 1.47
RPL23A-208ENST00000580755 UNC5CLQ8IV45 518 aa24.2■■□□□ 1.46
RPL23A-208ENST00000580755 SLIT2O94813 1529 aa24.2■■□□□ 1.46
RPL23A-208ENST00000580755 NEXMIFQ5QGS0 1516 aa24.2■■□□□ 1.46
RPL23A-208ENST00000580755 CLTCL1P53675 1640 aa24.19■■□□□ 1.46
RPL23A-208ENST00000580755 ORAI2Q96SN7 254 aa24.18■■□□□ 1.46
RPL23A-208ENST00000580755 NAIPQ13075 1403 aa24.18■■□□□ 1.46
RPL23A-208ENST00000580755 SEPT12Q8IYM1 358 aa24.17■■□□□ 1.46
RPL23A-208ENST00000580755 VGFO15240 615 aaPredicted RBP24.15■■□□□ 1.46
RPL23A-208ENST00000580755 NPHP3Q7Z494 1330 aa24.13■■□□□ 1.45
RPL23A-208ENST00000580755 R3HDM1Q15032 1099 aaKnown RBP24.13■■□□□ 1.45
RPL23A-208ENST00000580755 KRT27Q7Z3Y8 459 aa24.13■■□□□ 1.45
RPL23A-208ENST00000580755 RPGRIP1LQ68CZ1 1315 aa24.12■■□□□ 1.45
RPL23A-208ENST00000580755 PXDNQ92626 1479 aa24.12■■□□□ 1.45
RPL23A-208ENST00000580755 KIF1BO60333 1816 aa24.1■■□□□ 1.45
RPL23A-208ENST00000580755 RGPD1P0DJD0 1748 aa24.08■■□□□ 1.45
RPL23A-208ENST00000580755 ONECUT3O60422 494 aaPredicted RBP24.08■■□□□ 1.45
RPL23A-208ENST00000580755 HFM1A2PYH4 1435 aa24.08■■□□□ 1.44
RPL23A-208ENST00000580755 PRAG1Q86YV5 1406 aa24.08■■□□□ 1.44
RPL23A-208ENST00000580755 VPS72Q15906 364 aa24.06■■□□□ 1.44
RPL23A-208ENST00000580755 DISP2A7MBM2 1401 aa24.06■■□□□ 1.44
RPL23A-208ENST00000580755 SLC4A1APQ9BWU0 796 aaKnown RBP24.05■■□□□ 1.44
RPL23A-208ENST00000580755 USP32Q8NFA0 1604 aa24.05■■□□□ 1.44
RPL23A-208ENST00000580755 ROBO2Q9HCK4 1378 aa24.04■■□□□ 1.44
RPL23A-208ENST00000580755 DCAF8L1A6NGE4 600 aa24.04■■□□□ 1.44
RPL23A-208ENST00000580755 EN1Q05925 392 aaPredicted RBP24.04■■□□□ 1.44
RPL23A-208ENST00000580755 NWD2Q9ULI1 1742 aa24.01■■□□□ 1.43
RPL23A-208ENST00000580755 SENP3-EIF4A1A0A087X0R7 540 aa24■■□□□ 1.43
RPL23A-208ENST00000580755 LRPPRCP42704 1394 aaKnown RBP24■■□□□ 1.43
RPL23A-208ENST00000580755 PLCH1Q4KWH8 1693 aa23.97■■□□□ 1.43
RPL23A-208ENST00000580755 ESCO1Q5FWF5 840 aa23.97■■□□□ 1.43
RPL23A-208ENST00000580755 CDC42BPGQ6DT37 1551 aa23.97■■□□□ 1.43
RPL23A-208ENST00000580755 CCDC9Q9Y3X0 531 aaKnown RBP23.97■■□□□ 1.43
RPL23A-208ENST00000580755 TNS1Q9HBL0 1735 aaKnown RBP23.96■■□□□ 1.43
RPL23A-208ENST00000580755 NINLQ9Y2I6 1382 aa23.96■■□□□ 1.43
RPL23A-208ENST00000580755 XPCQ01831 940 aaPredicted RBP23.95■■□□□ 1.42
RPL23A-208ENST00000580755 PPLO60437 1756 aa23.95■■□□□ 1.42
RPL23A-208ENST00000580755 ADGRB2O60241 1585 aa23.95■■□□□ 1.42
RPL23A-208ENST00000580755 A0A0G2JS52 829 aa23.94■■□□□ 1.42
RPL23A-208ENST00000580755 FOXO3O43524 673 aa23.94■■□□□ 1.42
RPL23A-208ENST00000580755 MYT1Q01538 1121 aa23.94■■□□□ 1.42
RPL23A-208ENST00000580755 PARD3Q8TEW0 1356 aa23.91■■□□□ 1.42
RPL23A-208ENST00000580755 SPATA31A3Q5VYP0 1347 aa23.9■■□□□ 1.42
RPL23A-208ENST00000580755 ZNF784Q8NCA9 323 aaPredicted RBP23.9■■□□□ 1.42
RPL23A-208ENST00000580755 CCDC144AA2RUR9 1427 aa23.9■■□□□ 1.42
RPL23A-208ENST00000580755 EZH2Q15910 746 aaKnown RBP23.89■■□□□ 1.41
RPL23A-208ENST00000580755 PPP1R1BQ9UD71 204 aaPredicted RBP23.89■■□□□ 1.41
RPL23A-208ENST00000580755 ANKRD30BQ9BXX2 1392 aa23.89■■□□□ 1.41
RPL23A-208ENST00000580755 ADGRF5Q8IZF2 1346 aa23.88■■□□□ 1.41
RPL23A-208ENST00000580755 TECPR2O15040 1411 aa23.87■■□□□ 1.41
RPL23A-208ENST00000580755 HAP1P54257 671 aaPredicted RBP23.87■■□□□ 1.41
RPL23A-208ENST00000580755 SPATA31E1Q6ZUB1 1445 aa23.86■■□□□ 1.41
RPL23A-208ENST00000580755 C1QTNF8P60827 252 aa23.85■■□□□ 1.41
RPL23A-208ENST00000580755 RGL3Q3MIN7 710 aa23.85■■□□□ 1.41
RPL23A-208ENST00000580755 CAMKK2Q96RR4 588 aa23.85■■□□□ 1.41
RPL23A-208ENST00000580755 ABCC11Q96J66 1382 aa23.84■■□□□ 1.41
RPL23A-208ENST00000580755 FAM98CQ17RN3 349 aaKnown RBP23.84■■□□□ 1.41
RPL23A-208ENST00000580755 MPHOSPH9Q99550 1183 aa23.84■■□□□ 1.41
RPL23A-208ENST00000580755 KIF1AQ12756 1690 aa23.83■■□□□ 1.41
RPL23A-208ENST00000580755 SPON1Q9HCB6 807 aa23.83■■□□□ 1.41
RPL23A-208ENST00000580755 STK26Q9P289 416 aa23.82■■□□□ 1.4
RPL23A-208ENST00000580755 RREB1Q92766 1687 aa23.82■■□□□ 1.4
RPL23A-208ENST00000580755 CAMTA1Q9Y6Y1 1673 aa23.82■■□□□ 1.4
RPL23A-208ENST00000580755 ACIN1Q9UKV3 1341 aaKnown RBP23.82■■□□□ 1.4
RPL23A-208ENST00000580755 NRAPQ86VF7 1730 aa23.81■■□□□ 1.4
RPL23A-208ENST00000580755 WAPLQ7Z5K2 1190 aa23.81■■□□□ 1.4
RPL23A-208ENST00000580755 ABCA3Q99758 1704 aa23.81■■□□□ 1.4
RPL23A-208ENST00000580755 TNS3Q68CZ2 1445 aa23.8■■□□□ 1.4
RPL23A-208ENST00000580755 PIK3C2GO75747 1445 aa23.79■■□□□ 1.4
RPL23A-208ENST00000580755 NUP188Q5SRE5 1749 aa23.79■■□□□ 1.4
RPL23A-208ENST00000580755 FAM182BQ5T319 152 aa23.78■■□□□ 1.4
RPL23A-208ENST00000580755 SIRT1Q96EB6 747 aa23.78■■□□□ 1.4
RPL23A-208ENST00000580755 THSD7AQ9UPZ6 1657 aa23.78■■□□□ 1.4
RPL23A-208ENST00000580755 IFT172Q9UG01 1749 aa23.77■■□□□ 1.4
RPL23A-208ENST00000580755 TMEM132EQ6IEE7 984 aa23.77■■□□□ 1.4
RPL23A-208ENST00000580755 KCNQ2O43526 872 aa23.76■■□□□ 1.39
RPL23A-208ENST00000580755 NBPF8Q3BBV2 869 aa23.76■■□□□ 1.39
RPL23A-208ENST00000580755 NBPF14Q5TI25 921 aa23.76■■□□□ 1.39
RPL23A-208ENST00000580755 KNDC1Q76NI1 1749 aa23.76■■□□□ 1.39
RPL23A-208ENST00000580755 UTRNP46939 3433 aa23.75■■□□□ 1.39
RPL23A-208ENST00000580755 PLEKHH1Q9ULM0 1364 aa23.75■■□□□ 1.39
RPL23A-208ENST00000580755 YTHDC2Q9H6S0 1430 aaKnown RBP23.75■■□□□ 1.39
RPL23A-208ENST00000580755 NUTM2FA1L443 756 aa23.74■■□□□ 1.39
RPL23A-208ENST00000580755 KRT28Q7Z3Y7 464 aa23.74■■□□□ 1.39
RPL23A-208ENST00000580755 CABLES1Q8TDN4 633 aa23.73■■□□□ 1.39
RPL23A-208ENST00000580755 C14orf93Q9H972 538 aaKnown RBP23.73■■□□□ 1.39
RPL23A-208ENST00000580755 ARHGEF10O15013 1369 aa23.71■■□□□ 1.39
RPL23A-208ENST00000580755 FAM83GA6ND36 823 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms